RNA–Protein interactions for RNA: ENST00000463216.5

TTC3-212, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-212ENST00000463216 NBPF15Q8N660 670 aa31.86■■■□□ 2.69
TTC3-212ENST00000463216 TNRC6CQ9HCJ0 1690 aaKnown RBP31.86■■■□□ 2.69
TTC3-212ENST00000463216 MAPK8IP3Q9UPT6 1336 aa31.85■■■□□ 2.69
TTC3-212ENST00000463216 FAM177BA6PVY3 158 aa31.85■■■□□ 2.69
TTC3-212ENST00000463216 CLEC4GQ6UXB4 293 aa31.85■■■□□ 2.69
TTC3-212ENST00000463216 NGEFQ8N5V2 710 aa31.85■■■□□ 2.69
TTC3-212ENST00000463216 THUMPD2Q9BTF0 503 aaKnown RBP31.85■■■□□ 2.69
TTC3-212ENST00000463216 ZC3H4Q9UPT8 1303 aaKnown RBP31.84■■■□□ 2.69
TTC3-212ENST00000463216 PLEKHF1Q96S99 279 aa31.84■■■□□ 2.69
TTC3-212ENST00000463216 NIP7Q9Y221 180 aaKnown RBP eCLIP31.84■■■□□ 2.69
TTC3-212ENST00000463216 NFE2L2Q16236 605 aa31.83■■■□□ 2.69
TTC3-212ENST00000463216 PNISRQ8TF01 805 aaKnown RBP31.83■■■□□ 2.69
TTC3-212ENST00000463216 CNKSR1Q969H4 720 aa31.83■■■□□ 2.69
TTC3-212ENST00000463216 TIAM2Q8IVF5 1701 aa31.83■■■□□ 2.69
TTC3-212ENST00000463216 PNNQ9H307 717 aaKnown RBP31.82■■■□□ 2.68
TTC3-212ENST00000463216 GLTPD2A6NH11 291 aa31.81■■■□□ 2.68
TTC3-212ENST00000463216 SRGNP10124 158 aa31.81■■■□□ 2.68
TTC3-212ENST00000463216 STYK1Q6J9G0 422 aa31.81■■■□□ 2.68
TTC3-212ENST00000463216 MASTLQ96GX5 879 aa31.81■■■□□ 2.68
TTC3-212ENST00000463216 PRPF40BQ6NWY9 871 aaKnown RBP31.8■■■□□ 2.68
TTC3-212ENST00000463216 SLX4Q8IY92 1834 aa31.79■■■□□ 2.68
TTC3-212ENST00000463216 FSTL1Q12841 308 aa31.79■■■□□ 2.68
TTC3-212ENST00000463216 LAMB4A4D0S4 1761 aa31.79■■■□□ 2.68
TTC3-212ENST00000463216 HLFQ16534 295 aa31.78■■■□□ 2.68
TTC3-212ENST00000463216 ERFEQ4G0M1 354 aa31.78■■■□□ 2.68
TTC3-212ENST00000463216 TPTE2Q6XPS3 522 aa31.78■■■□□ 2.68
TTC3-212ENST00000463216 RRP7AQ9Y3A4 280 aaKnown RBP31.78■■■□□ 2.68
TTC3-212ENST00000463216 KDM3BQ7LBC6 1761 aa31.77■■■□□ 2.68
TTC3-212ENST00000463216 GTF2E1P29083 439 aaPredicted RBP31.77■■■□□ 2.68
TTC3-212ENST00000463216 HTRA3P83110 453 aa31.77■■■□□ 2.68
TTC3-212ENST00000463216 TAOK3Q9H2K8 898 aa31.77■■■□□ 2.68
TTC3-212ENST00000463216 FER1L6Q2WGJ9 1857 aa31.77■■■□□ 2.68
TTC3-212ENST00000463216 VEGFAP15692 232 aaPredicted RBP31.76■■■□□ 2.67
TTC3-212ENST00000463216 DPY19L2Q6NUT2 758 aa31.76■■■□□ 2.67
TTC3-212ENST00000463216 MYL6BP14649 208 aa31.75■■■□□ 2.67
TTC3-212ENST00000463216 EIF4A1P60842 406 aaKnown RBP31.75■■■□□ 2.67
TTC3-212ENST00000463216 SMC1BQ8NDV3 1235 aa31.74■■■□□ 2.67
TTC3-212ENST00000463216 WDR90Q96KV7 1748 aa31.74■■■□□ 2.67
TTC3-212ENST00000463216 NPR1P16066 1061 aa31.72■■■□□ 2.67
TTC3-212ENST00000463216 RALBP1Q15311 655 aa31.72■■■□□ 2.67
TTC3-212ENST00000463216 SOGA3Q5TF21 947 aa31.72■■■□□ 2.67
TTC3-212ENST00000463216 DICER1Q9UPY3 1922 aaKnown RBP31.72■■■□□ 2.67
TTC3-212ENST00000463216 DDX10Q13206 875 aaKnown RBP31.71■■■□□ 2.67
TTC3-212ENST00000463216 KIF6Q6ZMV9 814 aa31.71■■■□□ 2.67
TTC3-212ENST00000463216 DNAJC5GQ8N7S2 189 aa31.71■■■□□ 2.67
TTC3-212ENST00000463216 ARFGEF2Q9Y6D5 1785 aa31.71■■■□□ 2.67
TTC3-212ENST00000463216 RIPK4P57078 832 aa31.7■■■□□ 2.67
TTC3-212ENST00000463216 TSPYL4Q9UJ04 414 aa31.7■■■□□ 2.67
TTC3-212ENST00000463216 RGL2O15211 777 aa31.69■■■□□ 2.66
TTC3-212ENST00000463216 LTBP3Q9NS15 1303 aa31.69■■■□□ 2.66
TTC3-212ENST00000463216 TTLL7Q6ZT98 887 aa31.68■■■□□ 2.66
TTC3-212ENST00000463216 ZBTB3Q9H5J0 574 aa31.68■■■□□ 2.66
TTC3-212ENST00000463216 MAP3K15Q6ZN16 1313 aa31.68■■■□□ 2.66
TTC3-212ENST00000463216 CCDC93Q567U6 631 aa31.67■■■□□ 2.66
TTC3-212ENST00000463216 NUP98P52948 1817 aa31.67■■■□□ 2.66
TTC3-212ENST00000463216 GPTP24298 496 aa31.66■■■□□ 2.66
TTC3-212ENST00000463216 NUTM1Q86Y26 1132 aa31.66■■■□□ 2.66
TTC3-212ENST00000463216 ERVV-1B6SEH8 477 aa31.65■■■□□ 2.66
TTC3-212ENST00000463216 NYXQ9GZU5 481 aa31.65■■■□□ 2.66
TTC3-212ENST00000463216 KLRG2A4D1S0 409 aaPredicted RBP31.64■■■□□ 2.66
TTC3-212ENST00000463216 POTECB2RU33 542 aa31.64■■■□□ 2.66
TTC3-212ENST00000463216 EIF2S2P20042 333 aaKnown RBP31.64■■■□□ 2.66
TTC3-212ENST00000463216 OLFM4Q6UX06 510 aa31.64■■■□□ 2.66
TTC3-212ENST00000463216 C7orf43Q8WVR3 580 aa31.64■■■□□ 2.66
TTC3-212ENST00000463216 DDNO94850 711 aaPredicted RBP31.63■■■□□ 2.65
TTC3-212ENST00000463216 NEUROD2Q15784 382 aa31.62■■■□□ 2.65
TTC3-212ENST00000463216 CCDC146Q8IYE0 955 aa31.62■■■□□ 2.65
TTC3-212ENST00000463216 ALDH1B1P30837 517 aa31.61■■■□□ 2.65
TTC3-212ENST00000463216 TMPOP42166 694 aaKnown RBP31.61■■■□□ 2.65
TTC3-212ENST00000463216 KLRG1Q96E93 195 aa31.61■■■□□ 2.65
TTC3-212ENST00000463216 ZNF277Q9NRM2 450 aaPredicted RBP31.61■■■□□ 2.65
TTC3-212ENST00000463216 ABCC12Q96J65 1359 aa31.6■■■□□ 2.65
TTC3-212ENST00000463216 LMOD3Q0VAK6 560 aa31.6■■■□□ 2.65
TTC3-212ENST00000463216 IFFO2Q5TF58 517 aa31.6■■■□□ 2.65
TTC3-212ENST00000463216 MYBBP1AQ9BQG0 1328 aaKnown RBP31.59■■■□□ 2.65
TTC3-212ENST00000463216 FKBP4Q02790 459 aaKnown RBP eCLIP31.59■■■□□ 2.65
TTC3-212ENST00000463216 UBN2Q6ZU65 1347 aa31.57■■■□□ 2.64
TTC3-212ENST00000463216 SUSD4Q5VX71 490 aa31.57■■■□□ 2.64
TTC3-212ENST00000463216 RTKN2Q8IZC4 609 aa31.57■■■□□ 2.64
TTC3-212ENST00000463216 NECTIN2Q92692 538 aa31.57■■■□□ 2.64
TTC3-212ENST00000463216 RPGRQ92834 1020 aaKnown RBP31.57■■■□□ 2.64
TTC3-212ENST00000463216 ERBB4Q15303 1308 aa31.56■■■□□ 2.64
TTC3-212ENST00000463216 ANXA1P04083 346 aa31.56■■■□□ 2.64
TTC3-212ENST00000463216 LAS1LQ9Y4W2 734 aaKnown RBP31.56■■■□□ 2.64
TTC3-212ENST00000463216 WDR43Q15061 677 aaKnown RBP eCLIP31.55■■■□□ 2.64
TTC3-212ENST00000463216 GIGYF2Q6Y7W6 1299 aaKnown RBP31.55■■■□□ 2.64
TTC3-212ENST00000463216 ZNF34Q8IZ26 560 aa31.53■■■□□ 2.64
TTC3-212ENST00000463216 SYNE4Q8N205 404 aa31.53■■■□□ 2.64
TTC3-212ENST00000463216 PROSER3Q2NL68 480 aa31.52■■■□□ 2.64
TTC3-212ENST00000463216 CRY2Q49AN0 593 aa31.52■■■□□ 2.64
TTC3-212ENST00000463216 PPP1R42Q7Z4L9 355 aa31.52■■■□□ 2.64
TTC3-212ENST00000463216 TCERG1O14776 1098 aaKnown RBP31.51■■■□□ 2.63
TTC3-212ENST00000463216 POTEIP0CG38 1075 aa31.51■■■□□ 2.63
TTC3-212ENST00000463216 POTEJP0CG39 1038 aa31.51■■■□□ 2.63
TTC3-212ENST00000463216 AIMP1Q12904 312 aaKnown RBP31.51■■■□□ 2.63
TTC3-212ENST00000463216 PDIA6Q15084 440 aa31.51■■■□□ 2.63
TTC3-212ENST00000463216 BABAM1Q9NWV8 329 aa31.51■■■□□ 2.63
TTC3-212ENST00000463216 IARSP41252 1262 aaKnown RBP31.5■■■□□ 2.63
TTC3-212ENST00000463216 CHADLQ6NUI6 762 aa31.5■■■□□ 2.63
TTC3-212ENST00000463216 ZNF541Q9H0D2 1346 aa31.49■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms