RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 LTBP3Q9NS15 1303 aa26.4■■□□□ 1.82
VARS-221ENST00000463184 TIAM2Q8IVF5 1701 aa26.4■■□□□ 1.82
VARS-221ENST00000463184 SRGNP10124 158 aa26.4■■□□□ 1.82
VARS-221ENST00000463184 MASTLQ96GX5 879 aa26.4■■□□□ 1.82
VARS-221ENST00000463184 TAOK3Q9H2K8 898 aa26.4■■□□□ 1.82
VARS-221ENST00000463184 POTECB2RU33 542 aa26.39■■□□□ 1.82
VARS-221ENST00000463184 HTATSF1O43719 755 aaKnown RBP26.39■■□□□ 1.82
VARS-221ENST00000463184 PPP2R1AP30153 589 aa26.39■■□□□ 1.82
VARS-221ENST00000463184 SOGA3Q5TF21 947 aa26.39■■□□□ 1.82
VARS-221ENST00000463184 MCM10Q7L590 875 aa26.39■■□□□ 1.82
VARS-221ENST00000463184 ZNF652Q9Y2D9 606 aa26.39■■□□□ 1.82
VARS-221ENST00000463184 PRAMEF22A3QJZ6 481 aa26.38■■□□□ 1.81
VARS-221ENST00000463184 PIP4K2AP48426 406 aaPredicted RBP26.38■■□□□ 1.81
VARS-221ENST00000463184 FER1L6Q2WGJ9 1857 aa26.38■■□□□ 1.81
VARS-221ENST00000463184 COL11A2P13942 1736 aaPredicted RBP26.37■■□□□ 1.81
VARS-221ENST00000463184 PRPF40BQ6NWY9 871 aaKnown RBP26.37■■□□□ 1.81
VARS-221ENST00000463184 NBPF5PQ86XG9 351 aaPredicted RBP26.37■■□□□ 1.81
VARS-221ENST00000463184 BCORQ6W2J9 1755 aa26.36■■□□□ 1.81
VARS-221ENST00000463184 RGL2O15211 777 aa26.36■■□□□ 1.81
VARS-221ENST00000463184 DICER1Q9UPY3 1922 aaKnown RBP26.35■■□□□ 1.81
VARS-221ENST00000463184 SLX4Q8IY92 1834 aa26.33■■□□□ 1.81
VARS-221ENST00000463184 DCTN1Q14203 1278 aa26.33■■□□□ 1.81
VARS-221ENST00000463184 TPTE2Q6XPS3 522 aa26.33■■□□□ 1.81
VARS-221ENST00000463184 TAF7Q15545 349 aaPredicted RBP26.32■■□□□ 1.8
VARS-221ENST00000463184 KLRG2A4D1S0 409 aaPredicted RBP26.31■■□□□ 1.8
VARS-221ENST00000463184 NBPF26B4DH59 902 aa26.31■■□□□ 1.8
VARS-221ENST00000463184 NPR1P16066 1061 aa26.31■■□□□ 1.8
VARS-221ENST00000463184 NBPF10Q6P3W6 841 aaKnown RBP26.31■■□□□ 1.8
VARS-221ENST00000463184 NBPF15Q8N660 670 aa26.31■■□□□ 1.8
VARS-221ENST00000463184 C7orf43Q8WVR3 580 aa26.3■■□□□ 1.8
VARS-221ENST00000463184 NIP7Q9Y221 180 aaKnown RBP eCLIP26.3■■□□□ 1.8
VARS-221ENST00000463184 DDNO94850 711 aaPredicted RBP26.29■■□□□ 1.8
VARS-221ENST00000463184 CCDC93Q567U6 631 aa26.29■■□□□ 1.8
VARS-221ENST00000463184 COL13A1Q5TAT6 717 aaPredicted RBP26.29■■□□□ 1.8
VARS-221ENST00000463184 PCNTO95613 3336 aa26.29■■□□□ 1.8
VARS-221ENST00000463184 ARFGEF2Q9Y6D5 1785 aa26.28■■□□□ 1.8
VARS-221ENST00000463184 NEFMP07197 916 aa26.27■■□□□ 1.8
VARS-221ENST00000463184 CHADLQ6NUI6 762 aa26.27■■□□□ 1.8
VARS-221ENST00000463184 CACNA1SQ13698 1873 aa26.25■■□□□ 1.79
VARS-221ENST00000463184 IQCA1LA6NCM1 817 aa26.25■■□□□ 1.79
VARS-221ENST00000463184 PNISRQ8TF01 805 aaKnown RBP26.25■■□□□ 1.79
VARS-221ENST00000463184 MIS18AQ9NYP9 233 aa26.25■■□□□ 1.79
VARS-221ENST00000463184 ALDH1B1P30837 517 aa26.24■■□□□ 1.79
VARS-221ENST00000463184 ZEB1P37275 1124 aaPredicted RBP26.24■■□□□ 1.79
VARS-221ENST00000463184 FKBP4Q02790 459 aaKnown RBP eCLIP26.24■■□□□ 1.79
VARS-221ENST00000463184 HLFQ16534 295 aa26.24■■□□□ 1.79
VARS-221ENST00000463184 RTKN2Q8IZC4 609 aa26.24■■□□□ 1.79
VARS-221ENST00000463184 FAM177BA6PVY3 158 aa26.23■■□□□ 1.79
VARS-221ENST00000463184 GTF2E1P29083 439 aaPredicted RBP26.23■■□□□ 1.79
VARS-221ENST00000463184 L3MBTL3Q96JM7 780 aaPredicted RBP26.23■■□□□ 1.79
VARS-221ENST00000463184 CREBZFQ9NS37 354 aa26.22■■□□□ 1.79
VARS-221ENST00000463184 ERVV-1B6SEH8 477 aa26.21■■□□□ 1.79
VARS-221ENST00000463184 POTEIP0CG38 1075 aa26.21■■□□□ 1.79
VARS-221ENST00000463184 POTEJP0CG39 1038 aa26.21■■□□□ 1.79
VARS-221ENST00000463184 HSPA1AP0DMV8 641 aaKnown RBP26.2■■□□□ 1.78
VARS-221ENST00000463184 HSPA1BP0DMV9 641 aaKnown RBP26.2■■□□□ 1.78
VARS-221ENST00000463184 NYXQ9GZU5 481 aa26.2■■□□□ 1.78
VARS-221ENST00000463184 ZNF277Q9NRM2 450 aaPredicted RBP26.2■■□□□ 1.78
VARS-221ENST00000463184 LDHDQ86WU2 507 aa26.19■■□□□ 1.78
VARS-221ENST00000463184 TAF1DQ9H5J8 278 aaPredicted RBP26.19■■□□□ 1.78
VARS-221ENST00000463184 EIF4A1P60842 406 aaKnown RBP26.18■■□□□ 1.78
VARS-221ENST00000463184 NGEFQ8N5V2 710 aa26.18■■□□□ 1.78
VARS-221ENST00000463184 PLEKHF1Q96S99 279 aa26.18■■□□□ 1.78
VARS-221ENST00000463184 OLFM4Q6UX06 510 aa26.17■■□□□ 1.78
VARS-221ENST00000463184 TNS4Q8IZW8 715 aa26.17■■□□□ 1.78
VARS-221ENST00000463184 MAP3K15Q6ZN16 1313 aa26.16■■□□□ 1.78
VARS-221ENST00000463184 SCN4AP35499 1836 aa26.16■■□□□ 1.78
VARS-221ENST00000463184 LAMB4A4D0S4 1761 aa26.16■■□□□ 1.78
VARS-221ENST00000463184 NFE2L2Q16236 605 aa26.16■■□□□ 1.78
VARS-221ENST00000463184 CRY2Q49AN0 593 aa26.16■■□□□ 1.78
VARS-221ENST00000463184 KIF6Q6ZMV9 814 aa26.16■■□□□ 1.78
VARS-221ENST00000463184 SYNE4Q8N205 404 aa26.16■■□□□ 1.78
VARS-221ENST00000463184 PNNQ9H307 717 aaKnown RBP26.16■■□□□ 1.78
VARS-221ENST00000463184 RRP7AQ9Y3A4 280 aaKnown RBP26.16■■□□□ 1.78
VARS-221ENST00000463184 IARSP41252 1262 aaKnown RBP26.15■■□□□ 1.78
VARS-221ENST00000463184 PASKQ96RG2 1323 aa26.14■■□□□ 1.78
VARS-221ENST00000463184 ZNF541Q9H0D2 1346 aa26.14■■□□□ 1.78
VARS-221ENST00000463184 PSMD1Q99460 953 aa26.14■■□□□ 1.78
VARS-221ENST00000463184 HACL1Q9UJ83 578 aa26.14■■□□□ 1.78
VARS-221ENST00000463184 FZD9O00144 591 aa26.13■■□□□ 1.77
VARS-221ENST00000463184 CC2D2BQ6DHV5 1058 aa26.13■■□□□ 1.77
VARS-221ENST00000463184 TTLL7Q6ZT98 887 aa26.13■■□□□ 1.77
VARS-221ENST00000463184 NUTM1Q86Y26 1132 aa26.13■■□□□ 1.77
VARS-221ENST00000463184 MKRN1Q9UHC7 482 aaKnown RBP26.13■■□□□ 1.77
VARS-221ENST00000463184 DLG5Q8TDM6 1919 aa26.13■■□□□ 1.77
VARS-221ENST00000463184 KDM3BQ7LBC6 1761 aa26.12■■□□□ 1.77
VARS-221ENST00000463184 ABCC12Q96J65 1359 aa26.11■■□□□ 1.77
VARS-221ENST00000463184 IBTKQ9P2D0 1353 aaPredicted RBP26.11■■□□□ 1.77
VARS-221ENST00000463184 MYL6BP14649 208 aa26.11■■□□□ 1.77
VARS-221ENST00000463184 EAPPQ56P03 285 aaPredicted RBP26.11■■□□□ 1.77
VARS-221ENST00000463184 JDP2Q8WYK2 163 aa26.11■■□□□ 1.77
VARS-221ENST00000463184 RPGRQ92834 1020 aaKnown RBP26.11■■□□□ 1.77
VARS-221ENST00000463184 THUMPD2Q9BTF0 503 aaKnown RBP26.11■■□□□ 1.77
VARS-221ENST00000463184 MAPK8IP3Q9UPT6 1336 aa26.11■■□□□ 1.77
VARS-221ENST00000463184 NUP98P52948 1817 aa26.1■■□□□ 1.77
VARS-221ENST00000463184 HOXA10P31260 410 aaPredicted RBP26.1■■□□□ 1.77
VARS-221ENST00000463184 EPHX2P34913 555 aa26.1■■□□□ 1.77
VARS-221ENST00000463184 GRIPAP1Q4V328 841 aa26.1■■□□□ 1.77
VARS-221ENST00000463184 PNMA8AQ86V59 439 aaPredicted RBP26.1■■□□□ 1.77
VARS-221ENST00000463184 ERBB4Q15303 1308 aa26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms