RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 PA2G4Q9UQ80 394 aaKnown RBP12.5□□□□□ -0.41
MSH5-211ENST00000463144 COL16A1Q07092 1604 aaPredicted RBP12.5□□□□□ -0.41
MSH5-211ENST00000463144 COL14A1Q05707 1796 aaKnown RBP12.5□□□□□ -0.41
MSH5-211ENST00000463144 CD2BP2O95400 341 aaKnown RBP12.5□□□□□ -0.41
MSH5-211ENST00000463144 COL22A1Q8NFW1 1626 aaPredicted RBP12.5□□□□□ -0.41
MSH5-211ENST00000463144 AOX1Q06278 1338 aa12.5□□□□□ -0.41
MSH5-211ENST00000463144 AFDNP55196 1824 aaKnown RBP12.49□□□□□ -0.41
MSH5-211ENST00000463144 NEXNQ0ZGT2 675 aa12.49□□□□□ -0.41
MSH5-211ENST00000463144 PI4K2BQ8TCG2 481 aa12.49□□□□□ -0.41
MSH5-211ENST00000463144 HDAC5Q9UQL6 1122 aa12.49□□□□□ -0.41
MSH5-211ENST00000463144 TNS2Q63HR2 1409 aa12.49□□□□□ -0.41
MSH5-211ENST00000463144 EIF5BO60841 1220 aaKnown RBP12.49□□□□□ -0.41
MSH5-211ENST00000463144 FRAT2O75474 233 aaPredicted RBP12.49□□□□□ -0.41
MSH5-211ENST00000463144 HSP90AB4PQ58FF6 505 aa12.49□□□□□ -0.41
MSH5-211ENST00000463144 EPHA10Q5JZY3 1008 aa12.49□□□□□ -0.41
MSH5-211ENST00000463144 CASC1Q6TDU7 716 aa12.49□□□□□ -0.41
MSH5-211ENST00000463144 HSCBQ8IWL3 235 aa12.49□□□□□ -0.41
MSH5-211ENST00000463144 PTCD1O75127 700 aaKnown RBP12.48□□□□□ -0.41
MSH5-211ENST00000463144 A1BGP04217 495 aa12.48□□□□□ -0.41
MSH5-211ENST00000463144 JARID2Q92833 1246 aaPredicted RBP12.48□□□□□ -0.41
MSH5-211ENST00000463144 DISP2A7MBM2 1401 aa12.48□□□□□ -0.41
MSH5-211ENST00000463144 TRIM6-TRIM34B2RNG4 842 aa12.48□□□□□ -0.41
MSH5-211ENST00000463144 ERC2O15083 957 aa12.48□□□□□ -0.41
MSH5-211ENST00000463144 CHMLP26374 656 aa12.48□□□□□ -0.41
MSH5-211ENST00000463144 PLBD2Q8NHP8 589 aa12.48□□□□□ -0.41
MSH5-211ENST00000463144 RILPL2Q969X0 211 aa12.48□□□□□ -0.41
MSH5-211ENST00000463144 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.48□□□□□ -0.41
MSH5-211ENST00000463144 ERBB4Q15303 1308 aa12.47□□□□□ -0.41
MSH5-211ENST00000463144 ATP5J2-PTCD1G3V325 749 aa12.47□□□□□ -0.41
MSH5-211ENST00000463144 TTLL7Q6ZT98 887 aa12.47□□□□□ -0.41
MSH5-211ENST00000463144 ESYT1Q9BSJ8 1104 aa12.47□□□□□ -0.41
MSH5-211ENST00000463144 SASH1O94885 1247 aa12.46□□□□□ -0.41
MSH5-211ENST00000463144 USP42Q9H9J4 1324 aaKnown RBP12.46□□□□□ -0.41
MSH5-211ENST00000463144 NUP188Q5SRE5 1749 aa12.46□□□□□ -0.41
MSH5-211ENST00000463144 ITGB4P16144 1822 aa12.46□□□□□ -0.41
MSH5-211ENST00000463144 REC8O95072 547 aa12.46□□□□□ -0.42
MSH5-211ENST00000463144 MAP4K4O95819 1239 aaPredicted RBP12.46□□□□□ -0.42
MSH5-211ENST00000463144 OS9Q13438 667 aaPredicted RBP12.46□□□□□ -0.42
MSH5-211ENST00000463144 AK9Q5TCS8 1911 aa12.46□□□□□ -0.42
MSH5-211ENST00000463144 TOM1O60784 492 aa12.45□□□□□ -0.42
MSH5-211ENST00000463144 DDIT3P35638 169 aa12.45□□□□□ -0.42
MSH5-211ENST00000463144 PIGBQ92521 554 aa12.45□□□□□ -0.42
MSH5-211ENST00000463144 TMOD3Q9NYL9 352 aa12.45□□□□□ -0.42
MSH5-211ENST00000463144 CASP7P55210 303 aa12.45□□□□□ -0.42
MSH5-211ENST00000463144 KLHDC4Q8TBB5 520 aa12.45□□□□□ -0.42
MSH5-211ENST00000463144 IL25Q9H293 177 aa12.45□□□□□ -0.42
MSH5-211ENST00000463144 ASAP1Q9ULH1 1129 aa12.45□□□□□ -0.42
MSH5-211ENST00000463144 UBE3BQ7Z3V4 1068 aa12.44□□□□□ -0.42
MSH5-211ENST00000463144 CLASRPQ8N2M8 674 aaKnown RBP12.44□□□□□ -0.42
MSH5-211ENST00000463144 PLCH1Q4KWH8 1693 aa12.44□□□□□ -0.42
MSH5-211ENST00000463144 A0A087WZG4 1122 aa12.44□□□□□ -0.42
MSH5-211ENST00000463144 UBAP1LF5GYI3 381 aa12.44□□□□□ -0.42
MSH5-211ENST00000463144 DEKP35659 375 aaKnown RBP12.44□□□□□ -0.42
MSH5-211ENST00000463144 RFX5P48382 616 aaPredicted RBP12.44□□□□□ -0.42
MSH5-211ENST00000463144 RABEP1Q15276 862 aa12.44□□□□□ -0.42
MSH5-211ENST00000463144 ERC1Q8IUD2 1116 aa12.44□□□□□ -0.42
MSH5-211ENST00000463144 ATG3Q9NT62 314 aa12.44□□□□□ -0.42
MSH5-211ENST00000463144 COL15A1P39059 1388 aa12.43□□□□□ -0.42
MSH5-211ENST00000463144 TTC41PQ6P2S7 1318 aa12.43□□□□□ -0.42
MSH5-211ENST00000463144 RABL6Q3YEC7 729 aaPredicted RBP12.43□□□□□ -0.42
MSH5-211ENST00000463144 SIL1Q9H173 461 aa12.43□□□□□ -0.42
MSH5-211ENST00000463144 WNK3Q9BYP7 1800 aa12.43□□□□□ -0.42
MSH5-211ENST00000463144 PHLPP1O60346 1717 aa12.43□□□□□ -0.42
MSH5-211ENST00000463144 K7ELQ4 463 aaPredicted RBP12.42□□□□□ -0.42
MSH5-211ENST00000463144 G3BP1Q13283 466 aaKnown RBP eCLIP12.42□□□□□ -0.42
MSH5-211ENST00000463144 EAF2Q96CJ1 260 aaPredicted RBP12.42□□□□□ -0.42
MSH5-211ENST00000463144 CHMP5Q9NZZ3 219 aa12.42□□□□□ -0.42
MSH5-211ENST00000463144 TJP1Q07157 1748 aa12.42□□□□□ -0.42
MSH5-211ENST00000463144 H7C1W4 665 aa12.42□□□□□ -0.42
MSH5-211ENST00000463144 GLRX3O76003 335 aaKnown RBP12.41□□□□□ -0.42
MSH5-211ENST00000463144 PTPN12Q05209 780 aaKnown RBP12.41□□□□□ -0.42
MSH5-211ENST00000463144 AACSQ86V21 672 aa12.41□□□□□ -0.42
MSH5-211ENST00000463144 DNAJC10Q8IXB1 793 aa12.41□□□□□ -0.42
MSH5-211ENST00000463144 ZBTB3Q9H5J0 574 aa12.41□□□□□ -0.42
MSH5-211ENST00000463144 COPRSQ9NQ92 184 aa12.41□□□□□ -0.42
MSH5-211ENST00000463144 ECHDC1Q9NTX5 307 aa12.41□□□□□ -0.42
MSH5-211ENST00000463144 IFIT2P09913 472 aaKnown RBP12.41□□□□□ -0.42
MSH5-211ENST00000463144 FOXO4P98177 505 aa12.41□□□□□ -0.42
MSH5-211ENST00000463144 CCDC8Q9H0W5 538 aaPredicted RBP12.41□□□□□ -0.42
MSH5-211ENST00000463144 TLR7Q9NYK1 1049 aaKnown RBP12.41□□□□□ -0.42
MSH5-211ENST00000463144 BCL9O00512 1426 aa12.41□□□□□ -0.42
MSH5-211ENST00000463144 EXOC5O00471 708 aa12.4□□□□□ -0.42
MSH5-211ENST00000463144 ADAMTS2O95450 1211 aa12.4□□□□□ -0.42
MSH5-211ENST00000463144 VSIG10Q8N0Z9 540 aa12.4□□□□□ -0.42
MSH5-211ENST00000463144 CNTROBQ8N137 903 aa12.4□□□□□ -0.42
MSH5-211ENST00000463144 SLC4A9Q96Q91 983 aa12.4□□□□□ -0.42
MSH5-211ENST00000463144 PALD1Q9ULE6 856 aa12.4□□□□□ -0.42
MSH5-211ENST00000463144 NRAPQ86VF7 1730 aa12.4□□□□□ -0.42
MSH5-211ENST00000463144 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.4□□□□□ -0.42
MSH5-211ENST00000463144 ANO2Q9NQ90 1003 aa12.4□□□□□ -0.42
MSH5-211ENST00000463144 FOXD4L1Q9NU39 408 aa12.4□□□□□ -0.42
MSH5-211ENST00000463144 LRP6O75581 1613 aa12.4□□□□□ -0.43
MSH5-211ENST00000463144 CWC25Q9NXE8 425 aaPredicted RBP12.39□□□□□ -0.43
MSH5-211ENST00000463144 SGSM2O43147 1006 aa12.39□□□□□ -0.43
MSH5-211ENST00000463144 LMBR1LQ6UX01 489 aa12.39□□□□□ -0.43
MSH5-211ENST00000463144 CCDC191Q8NCU4 936 aa12.38□□□□□ -0.43
MSH5-211ENST00000463144 FBXO41Q8TF61 875 aa12.38□□□□□ -0.43
MSH5-211ENST00000463144 ISCA1Q9BUE6 129 aa12.38□□□□□ -0.43
MSH5-211ENST00000463144 TEX13AQ9BXU3 409 aaPredicted RBP12.38□□□□□ -0.43
MSH5-211ENST00000463144 SPATA31A1Q5TZJ5 1347 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms