RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 PXDNLA1KZ92 1463 aa18.22■□□□□ 0.51
COL6A1-202ENST00000463060 COL15A1P39059 1388 aa18.22■□□□□ 0.51
COL6A1-202ENST00000463060 ERVV-1B6SEH8 477 aa18.22■□□□□ 0.51
COL6A1-202ENST00000463060 IRX6P78412 446 aaPredicted RBP18.22■□□□□ 0.51
COL6A1-202ENST00000463060 BEND3Q5T5X7 828 aa18.22■□□□□ 0.51
COL6A1-202ENST00000463060 METTL22Q9BUU2 404 aaPredicted RBP18.22■□□□□ 0.51
COL6A1-202ENST00000463060 UBR3Q6ZT12 1888 aa18.22■□□□□ 0.51
COL6A1-202ENST00000463060 NUP188Q5SRE5 1749 aa18.21■□□□□ 0.51
COL6A1-202ENST00000463060 GNPATO15228 680 aa18.21■□□□□ 0.51
COL6A1-202ENST00000463060 SMIM5Q71RC9 77 aa18.21■□□□□ 0.51
COL6A1-202ENST00000463060 RIC3Q7Z5B4 369 aa18.21■□□□□ 0.51
COL6A1-202ENST00000463060 DZIP3Q86Y13 1208 aaKnown RBP18.21■□□□□ 0.51
COL6A1-202ENST00000463060 CRBNQ96SW2 442 aa18.21■□□□□ 0.51
COL6A1-202ENST00000463060 TBC1D2BQ9UPU7 963 aa18.21■□□□□ 0.51
COL6A1-202ENST00000463060 COG6Q9Y2V7 657 aa18.21■□□□□ 0.51
COL6A1-202ENST00000463060 RTCBQ9Y3I0 505 aaKnown RBP18.21■□□□□ 0.51
COL6A1-202ENST00000463060 ATP10DQ9P241 1426 aa18.21■□□□□ 0.51
COL6A1-202ENST00000463060 IBTKQ9P2D0 1353 aaPredicted RBP18.2■□□□□ 0.5
COL6A1-202ENST00000463060 A0A087WZG4 1122 aa18.2■□□□□ 0.5
COL6A1-202ENST00000463060 RGL2O15211 777 aa18.2■□□□□ 0.5
COL6A1-202ENST00000463060 CAMTA2O94983 1202 aa18.2■□□□□ 0.5
COL6A1-202ENST00000463060 CCT4P50991 539 aaKnown RBP18.2■□□□□ 0.5
COL6A1-202ENST00000463060 MVPQ14764 893 aaKnown RBP18.2■□□□□ 0.5
COL6A1-202ENST00000463060 ZNF827Q17R98 1081 aa18.2■□□□□ 0.5
COL6A1-202ENST00000463060 GIGYF2Q6Y7W6 1299 aaKnown RBP18.2■□□□□ 0.5
COL6A1-202ENST00000463060 FTSJ3Q8IY81 847 aaKnown RBP18.2■□□□□ 0.5
COL6A1-202ENST00000463060 ARHGEF1Q92888 912 aaKnown RBP18.2■□□□□ 0.5
COL6A1-202ENST00000463060 AK7Q96M32 723 aa18.2■□□□□ 0.5
COL6A1-202ENST00000463060 N4BP2Q86UW6 1770 aaPredicted RBP18.19■□□□□ 0.5
COL6A1-202ENST00000463060 ARFGEF2Q9Y6D5 1785 aa18.19■□□□□ 0.5
COL6A1-202ENST00000463060 ZBTB7BO15156 539 aaPredicted RBP18.19■□□□□ 0.5
COL6A1-202ENST00000463060 IGKV5-2P06315 115 aa18.19■□□□□ 0.5
COL6A1-202ENST00000463060 ADRA2BP18089 450 aa18.19■□□□□ 0.5
COL6A1-202ENST00000463060 HLFQ16534 295 aa18.19■□□□□ 0.5
COL6A1-202ENST00000463060 ZBTB3Q9H5J0 574 aa18.19■□□□□ 0.5
COL6A1-202ENST00000463060 ZNF330Q9Y3S2 320 aaPredicted RBP18.19■□□□□ 0.5
COL6A1-202ENST00000463060 SSFA2P28290 1259 aa18.18■□□□□ 0.5
COL6A1-202ENST00000463060 TRIM28Q13263 835 aaKnown RBP18.18■□□□□ 0.5
COL6A1-202ENST00000463060 TCIRG1Q13488 830 aa18.18■□□□□ 0.5
COL6A1-202ENST00000463060 SLC4A10Q6U841 1118 aa18.18■□□□□ 0.5
COL6A1-202ENST00000463060 KIF6Q6ZMV9 814 aa18.18■□□□□ 0.5
COL6A1-202ENST00000463060 LINS1Q8NG48 757 aa18.18■□□□□ 0.5
COL6A1-202ENST00000463060 EXOC6Q8TAG9 804 aa18.18■□□□□ 0.5
COL6A1-202ENST00000463060 NARFQ9UHQ1 456 aa18.18■□□□□ 0.5
COL6A1-202ENST00000463060 SRCAPQ6ZRS2 3230 aa18.17■□□□□ 0.5
COL6A1-202ENST00000463060 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.17■□□□□ 0.5
COL6A1-202ENST00000463060 ALDH1L1O75891 902 aa18.17■□□□□ 0.5
COL6A1-202ENST00000463060 TRAPPC3LQ5T215 181 aa18.17■□□□□ 0.5
COL6A1-202ENST00000463060 ISCA1Q9BUE6 129 aa18.17■□□□□ 0.5
COL6A1-202ENST00000463060 BCL2L12Q9HB09 334 aa18.17■□□□□ 0.5
COL6A1-202ENST00000463060 ANO8Q9HCE9 1232 aaPredicted RBP18.17■□□□□ 0.5
COL6A1-202ENST00000463060 NEFLP07196 543 aa18.16■□□□□ 0.5
COL6A1-202ENST00000463060 FKBP8Q14318 412 aa18.16■□□□□ 0.5
COL6A1-202ENST00000463060 CLEC4GQ6UXB4 293 aa18.16■□□□□ 0.5
COL6A1-202ENST00000463060 NPM2Q86SE8 214 aaKnown RBP18.16■□□□□ 0.5
COL6A1-202ENST00000463060 MYD88Q99836 296 aa18.16■□□□□ 0.5
COL6A1-202ENST00000463060 SRCIN1Q9C0H9 1055 aa18.16■□□□□ 0.5
COL6A1-202ENST00000463060 NUP98P52948 1817 aa18.16■□□□□ 0.5
COL6A1-202ENST00000463060 BCORQ6W2J9 1755 aa18.15■□□□□ 0.5
COL6A1-202ENST00000463060 NEURL1BA8MQ27 555 aa18.15■□□□□ 0.5
COL6A1-202ENST00000463060 SLC15A2Q16348 729 aa18.15■□□□□ 0.5
COL6A1-202ENST00000463060 ERICH6BQ5W0A0 696 aa18.15■□□□□ 0.5
COL6A1-202ENST00000463060 ITPRIPQ8IWB1 547 aa18.15■□□□□ 0.5
COL6A1-202ENST00000463060 ZNF34Q8IZ26 560 aa18.15■□□□□ 0.5
COL6A1-202ENST00000463060 USP44Q9H0E7 712 aa18.15■□□□□ 0.5
COL6A1-202ENST00000463060 ZBTB40Q9NUA8 1239 aa18.15■□□□□ 0.5
COL6A1-202ENST00000463060 DDX19BQ9UMR2 479 aa18.15■□□□□ 0.5
COL6A1-202ENST00000463060 USP42Q9H9J4 1324 aaKnown RBP18.15■□□□□ 0.5
COL6A1-202ENST00000463060 C4AP0C0L4 1744 aa18.15■□□□□ 0.5
COL6A1-202ENST00000463060 TUBGCP6Q96RT7 1819 aa18.14■□□□□ 0.5
COL6A1-202ENST00000463060 CWF19L2Q2TBE0 894 aaKnown RBP18.14■□□□□ 0.49
COL6A1-202ENST00000463060 SRP68Q9UHB9 627 aaKnown RBP18.14■□□□□ 0.49
COL6A1-202ENST00000463060 NEXNQ0ZGT2 675 aa18.13■□□□□ 0.49
COL6A1-202ENST00000463060 GCKRQ14397 625 aa18.13■□□□□ 0.49
COL6A1-202ENST00000463060 HSP90AB3PQ58FF7 597 aa18.13■□□□□ 0.49
COL6A1-202ENST00000463060 FLAD1Q8NFF5 587 aa18.13■□□□□ 0.49
COL6A1-202ENST00000463060 ARXQ96QS3 562 aa18.13■□□□□ 0.49
COL6A1-202ENST00000463060 TFCP2L1Q9NZI6 479 aa18.13■□□□□ 0.49
COL6A1-202ENST00000463060 UTYO14607 1347 aa18.13■□□□□ 0.49
COL6A1-202ENST00000463060 PNPLA7Q6ZV29 1317 aa18.13■□□□□ 0.49
COL6A1-202ENST00000463060 SCN7AQ01118 1682 aa18.12■□□□□ 0.49
COL6A1-202ENST00000463060 ATP5J2-PTCD1G3V325 749 aa18.12■□□□□ 0.49
COL6A1-202ENST00000463060 PHF14O94880 888 aa18.12■□□□□ 0.49
COL6A1-202ENST00000463060 RFC4P35249 363 aa18.12■□□□□ 0.49
COL6A1-202ENST00000463060 AAMPQ13685 434 aa18.12■□□□□ 0.49
COL6A1-202ENST00000463060 USPL1Q5W0Q7 1092 aa18.12■□□□□ 0.49
COL6A1-202ENST00000463060 COL23A1Q86Y22 540 aaPredicted RBP18.12■□□□□ 0.49
COL6A1-202ENST00000463060 CCDC191Q8NCU4 936 aa18.12■□□□□ 0.49
COL6A1-202ENST00000463060 QSER1Q2KHR3 1735 aa18.12■□□□□ 0.49
COL6A1-202ENST00000463060 NLRP10Q86W26 655 aa18.11■□□□□ 0.49
COL6A1-202ENST00000463060 MEIS3Q99687 375 aa18.11■□□□□ 0.49
COL6A1-202ENST00000463060 STK32BQ9NY57 414 aa18.11■□□□□ 0.49
COL6A1-202ENST00000463060 ANKRD36CQ5JPF3 1778 aa18.11■□□□□ 0.49
COL6A1-202ENST00000463060 UBN2Q6ZU65 1347 aa18.1■□□□□ 0.49
COL6A1-202ENST00000463060 ZPR1O75312 459 aa18.1■□□□□ 0.49
COL6A1-202ENST00000463060 GYS1P13807 737 aa18.1■□□□□ 0.49
COL6A1-202ENST00000463060 CASP7P55210 303 aa18.1■□□□□ 0.49
COL6A1-202ENST00000463060 H7C1W4 665 aa18.09■□□□□ 0.49
COL6A1-202ENST00000463060 GRM8O00222 908 aa18.09■□□□□ 0.49
COL6A1-202ENST00000463060 NBPF7P0C2Y1 421 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms