RNA–Protein interactions for RNA: ENST00000462996.1

PTPN18-208, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 4

Gene PTPN18, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-208ENST00000462996 A1BGP04217 495 aa27.34■■□□□ 1.97
PTPN18-208ENST00000462996 SOGA3Q5TF21 947 aa27.34■■□□□ 1.97
PTPN18-208ENST00000462996 C7orf43Q8WVR3 580 aa27.34■■□□□ 1.97
PTPN18-208ENST00000462996 AIDAQ96BJ3 306 aa27.34■■□□□ 1.97
PTPN18-208ENST00000462996 TEX13AQ9BXU3 409 aaPredicted RBP27.34■■□□□ 1.97
PTPN18-208ENST00000462996 IL17REQ8NFR9 667 aa27.33■■□□□ 1.97
PTPN18-208ENST00000462996 WBP1LQ9NX94 342 aa27.33■■□□□ 1.97
PTPN18-208ENST00000462996 NPHP1O15259 732 aa27.32■■□□□ 1.96
PTPN18-208ENST00000462996 ST5P78524 1137 aa27.32■■□□□ 1.96
PTPN18-208ENST00000462996 LBX1P52954 281 aa27.31■■□□□ 1.96
PTPN18-208ENST00000462996 SIPA1L3O60292 1781 aaPredicted RBP27.3■■□□□ 1.96
PTPN18-208ENST00000462996 DIAPH1O60610 1272 aaKnown RBP27.3■■□□□ 1.96
PTPN18-208ENST00000462996 EAPPQ56P03 285 aaPredicted RBP27.3■■□□□ 1.96
PTPN18-208ENST00000462996 ZNF541Q9H0D2 1346 aa27.3■■□□□ 1.96
PTPN18-208ENST00000462996 TEFQ10587 303 aa27.29■■□□□ 1.96
PTPN18-208ENST00000462996 BCORQ6W2J9 1755 aa27.28■■□□□ 1.96
PTPN18-208ENST00000462996 CCDC93Q567U6 631 aa27.28■■□□□ 1.96
PTPN18-208ENST00000462996 ADAMTSL1Q8N6G6 1762 aa27.27■■□□□ 1.96
PTPN18-208ENST00000462996 ZNF277Q9NRM2 450 aaPredicted RBP27.27■■□□□ 1.96
PTPN18-208ENST00000462996 HACL1Q9UJ83 578 aa27.27■■□□□ 1.96
PTPN18-208ENST00000462996 GNAT3A8MTJ3 354 aa27.26■■□□□ 1.95
PTPN18-208ENST00000462996 OLFM4Q6UX06 510 aa27.26■■□□□ 1.95
PTPN18-208ENST00000462996 DZIP3Q86Y13 1208 aaKnown RBP27.26■■□□□ 1.95
PTPN18-208ENST00000462996 FMNL2Q96PY5 1086 aa27.26■■□□□ 1.95
PTPN18-208ENST00000462996 CLEC11AQ9Y240 323 aa27.26■■□□□ 1.95
PTPN18-208ENST00000462996 KCNQ3O43525 872 aa27.25■■□□□ 1.95
PTPN18-208ENST00000462996 SLC34A2O95436 690 aa27.25■■□□□ 1.95
PTPN18-208ENST00000462996 FKBP4Q02790 459 aaKnown RBP eCLIP27.25■■□□□ 1.95
PTPN18-208ENST00000462996 NPM2Q86SE8 214 aaKnown RBP27.25■■□□□ 1.95
PTPN18-208ENST00000462996 RASSF10A6NK89 507 aa27.24■■□□□ 1.95
PTPN18-208ENST00000462996 HSPA8P11142 646 aaKnown RBP27.24■■□□□ 1.95
PTPN18-208ENST00000462996 EPHX2P34913 555 aa27.24■■□□□ 1.95
PTPN18-208ENST00000462996 DEFB115Q30KQ5 88 aa27.24■■□□□ 1.95
PTPN18-208ENST00000462996 NPR1P16066 1061 aa27.23■■□□□ 1.95
PTPN18-208ENST00000462996 PIP4K2AP48426 406 aaPredicted RBP27.23■■□□□ 1.95
PTPN18-208ENST00000462996 MAP1SQ66K74 1059 aaPredicted RBP27.23■■□□□ 1.95
PTPN18-208ENST00000462996 NBPF5PQ86XG9 351 aaPredicted RBP27.23■■□□□ 1.95
PTPN18-208ENST00000462996 CNTROBQ8N137 903 aa27.23■■□□□ 1.95
PTPN18-208ENST00000462996 ABHD8Q96I13 439 aa27.23■■□□□ 1.95
PTPN18-208ENST00000462996 KLRG2A4D1S0 409 aaPredicted RBP27.22■■□□□ 1.95
PTPN18-208ENST00000462996 TRIM26Q12899 539 aaPredicted RBP27.22■■□□□ 1.95
PTPN18-208ENST00000462996 USP16Q9Y5T5 823 aa27.22■■□□□ 1.95
PTPN18-208ENST00000462996 RNF123Q5XPI4 1314 aa27.21■■□□□ 1.95
PTPN18-208ENST00000462996 GAS2L2Q8NHY3 880 aa27.21■■□□□ 1.95
PTPN18-208ENST00000462996 WDR33Q9C0J8 1336 aaKnown RBP27.2■■□□□ 1.95
PTPN18-208ENST00000462996 CLEC4GQ6UXB4 293 aa27.2■■□□□ 1.94
PTPN18-208ENST00000462996 PNMA8AQ86V59 439 aaPredicted RBP27.2■■□□□ 1.94
PTPN18-208ENST00000462996 FZD9O00144 591 aa27.19■■□□□ 1.94
PTPN18-208ENST00000462996 FAM161AQ3B820 660 aa27.19■■□□□ 1.94
PTPN18-208ENST00000462996 CEMIPQ8WUJ3 1361 aa27.19■■□□□ 1.94
PTPN18-208ENST00000462996 PRAMEF22A3QJZ6 481 aa27.18■■□□□ 1.94
PTPN18-208ENST00000462996 RTKN2Q8IZC4 609 aa27.18■■□□□ 1.94
PTPN18-208ENST00000462996 CLSPNQ9HAW4 1339 aa27.17■■□□□ 1.94
PTPN18-208ENST00000462996 BTBD11A6QL63 1104 aa27.17■■□□□ 1.94
PTPN18-208ENST00000462996 IARSP41252 1262 aaKnown RBP27.17■■□□□ 1.94
PTPN18-208ENST00000462996 MAP2K1Q02750 393 aaPredicted RBP27.17■■□□□ 1.94
PTPN18-208ENST00000462996 CC2D1BQ5T0F9 858 aaKnown RBP27.17■■□□□ 1.94
PTPN18-208ENST00000462996 COL3A1P02461 1466 aaPredicted RBP27.17■■□□□ 1.94
PTPN18-208ENST00000462996 U2SURPO15042 1029 aaKnown RBP27.16■■□□□ 1.94
PTPN18-208ENST00000462996 PER1O15534 1290 aaPredicted RBP27.16■■□□□ 1.94
PTPN18-208ENST00000462996 SYNE4Q8N205 404 aa27.16■■□□□ 1.94
PTPN18-208ENST00000462996 TPTE2Q6XPS3 522 aa27.15■■□□□ 1.94
PTPN18-208ENST00000462996 GPC2Q8N158 579 aa27.15■■□□□ 1.94
PTPN18-208ENST00000462996 ABT1Q9ULW3 272 aaKnown RBP27.15■■□□□ 1.94
PTPN18-208ENST00000462996 NIP7Q9Y221 180 aaKnown RBP eCLIP27.14■■□□□ 1.94
PTPN18-208ENST00000462996 ZNF652Q9Y2D9 606 aa27.14■■□□□ 1.94
PTPN18-208ENST00000462996 DDX21Q9NR30 783 aaKnown RBP eCLIP27.13■■□□□ 1.93
PTPN18-208ENST00000462996 FAM177BA6PVY3 158 aa27.12■■□□□ 1.93
PTPN18-208ENST00000462996 FMR1Q06787 632 aaKnown RBP eCLIP27.12■■□□□ 1.93
PTPN18-208ENST00000462996 PHACTR3Q96KR7 559 aa27.12■■□□□ 1.93
PTPN18-208ENST00000462996 SNED1Q8TER0 1413 aa27.12■■□□□ 1.93
PTPN18-208ENST00000462996 ALDH1B1P30837 517 aa27.11■■□□□ 1.93
PTPN18-208ENST00000462996 KIF7Q2M1P5 1343 aa27.11■■□□□ 1.93
PTPN18-208ENST00000462996 LTBP1Q14766 1721 aa27.1■■□□□ 1.93
PTPN18-208ENST00000462996 NBPF26B4DH59 902 aa27.1■■□□□ 1.93
PTPN18-208ENST00000462996 NBPF10Q6P3W6 841 aaKnown RBP27.1■■□□□ 1.93
PTPN18-208ENST00000462996 NBPF15Q8N660 670 aa27.1■■□□□ 1.93
PTPN18-208ENST00000462996 COL4A5P29400 1685 aa27.09■■□□□ 1.93
PTPN18-208ENST00000462996 SNRPA1P09661 255 aaKnown RBP27.09■■□□□ 1.93
PTPN18-208ENST00000462996 PSMD1Q99460 953 aa27.09■■□□□ 1.93
PTPN18-208ENST00000462996 PCGF6Q9BYE7 350 aa27.09■■□□□ 1.93
PTPN18-208ENST00000462996 HLFQ16534 295 aa27.08■■□□□ 1.93
PTPN18-208ENST00000462996 CAPNS2Q96L46 248 aa27.08■■□□□ 1.93
PTPN18-208ENST00000462996 GJA3Q9Y6H8 435 aa27.08■■□□□ 1.93
PTPN18-208ENST00000462996 THSD7BQ9C0I4 1608 aa27.08■■□□□ 1.93
PTPN18-208ENST00000462996 RGL2O15211 777 aa27.07■■□□□ 1.92
PTPN18-208ENST00000462996 JDP2Q8WYK2 163 aa27.07■■□□□ 1.92
PTPN18-208ENST00000462996 CCDC85CA6NKD9 419 aa27.05■■□□□ 1.92
PTPN18-208ENST00000462996 EPS15P42566 896 aa27.05■■□□□ 1.92
PTPN18-208ENST00000462996 SCNN1DP51172 638 aa27.05■■□□□ 1.92
PTPN18-208ENST00000462996 CST9Q5W186 159 aa27.05■■□□□ 1.92
PTPN18-208ENST00000462996 CYP4F22Q6NT55 531 aa27.05■■□□□ 1.92
PTPN18-208ENST00000462996 PRKAR2BP31323 418 aa27.04■■□□□ 1.92
PTPN18-208ENST00000462996 RGS19P49795 217 aa27.04■■□□□ 1.92
PTPN18-208ENST00000462996 EIF6P56537 245 aaKnown RBP27.04■■□□□ 1.92
PTPN18-208ENST00000462996 MLLT1Q03111 559 aaPredicted RBP27.04■■□□□ 1.92
PTPN18-208ENST00000462996 CRY2Q49AN0 593 aa27.04■■□□□ 1.92
PTPN18-208ENST00000462996 GPR101Q96P66 508 aaPredicted RBP27.04■■□□□ 1.92
PTPN18-208ENST00000462996 TRPM7Q96QT4 1865 aa27.04■■□□□ 1.92
PTPN18-208ENST00000462996 GTF2E1P29083 439 aaPredicted RBP27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms