RNA–Protein interactions for RNA: ENST00000462421.1

DDX39B-216, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-216ENST00000462421 BRIP1Q9BX63 1249 aa11.58□□□□□ -0.56
DDX39B-216ENST00000462421 PRAMEF22A3QJZ6 481 aa11.57□□□□□ -0.56
DDX39B-216ENST00000462421 ERVV-1B6SEH8 477 aa11.57□□□□□ -0.56
DDX39B-216ENST00000462421 HOXB7P09629 217 aa11.57□□□□□ -0.56
DDX39B-216ENST00000462421 PPP1R42Q7Z4L9 355 aa11.57□□□□□ -0.56
DDX39B-216ENST00000462421 NECTIN2Q92692 538 aa11.57□□□□□ -0.56
DDX39B-216ENST00000462421 CNKSR1Q969H4 720 aa11.57□□□□□ -0.56
DDX39B-216ENST00000462421 GPBP1L1Q9HC44 474 aaPredicted RBP11.57□□□□□ -0.56
DDX39B-216ENST00000462421 IFT57Q9NWB7 429 aa11.57□□□□□ -0.56
DDX39B-216ENST00000462421 MAP3K15Q6ZN16 1313 aa11.57□□□□□ -0.56
DDX39B-216ENST00000462421 SIPA1L3O60292 1781 aaPredicted RBP11.56□□□□□ -0.56
DDX39B-216ENST00000462421 CHRNA5P30532 468 aa11.56□□□□□ -0.56
DDX39B-216ENST00000462421 AIMP1Q12904 312 aaKnown RBP11.56□□□□□ -0.56
DDX39B-216ENST00000462421 C16orf71Q8IYS4 520 aaPredicted RBP11.56□□□□□ -0.56
DDX39B-216ENST00000462421 STK31Q9BXU1 1019 aa11.56□□□□□ -0.56
DDX39B-216ENST00000462421 ZBTB3Q9H5J0 574 aa11.56□□□□□ -0.56
DDX39B-216ENST00000462421 DBF4Q9UBU7 674 aaPredicted RBP11.56□□□□□ -0.56
DDX39B-216ENST00000462421 DDX58O95786 925 aaKnown RBP11.55□□□□□ -0.56
DDX39B-216ENST00000462421 HSP90B1P14625 803 aaKnown RBP11.55□□□□□ -0.56
DDX39B-216ENST00000462421 GOLGA2Q08379 1002 aa11.55□□□□□ -0.56
DDX39B-216ENST00000462421 PARP10Q53GL7 1025 aa11.55□□□□□ -0.56
DDX39B-216ENST00000462421 FAM9BQ8IZU0 186 aa11.55□□□□□ -0.56
DDX39B-216ENST00000462421 ZNF784Q8NCA9 323 aaPredicted RBP11.55□□□□□ -0.56
DDX39B-216ENST00000462421 RPGRQ92834 1020 aaKnown RBP11.55□□□□□ -0.56
DDX39B-216ENST00000462421 MASTLQ96GX5 879 aa11.55□□□□□ -0.56
DDX39B-216ENST00000462421 MYH14Q7Z406 1995 aaKnown RBP11.54□□□□□ -0.56
DDX39B-216ENST00000462421 CHL1O00533 1208 aa11.54□□□□□ -0.56
DDX39B-216ENST00000462421 PRR5LQ6MZQ0 368 aa11.54□□□□□ -0.56
DDX39B-216ENST00000462421 ZNF526Q8TF50 670 aaPredicted RBP11.54□□□□□ -0.56
DDX39B-216ENST00000462421 HYPKQ9NX55 129 aa11.54□□□□□ -0.56
DDX39B-216ENST00000462421 SCN7AQ01118 1682 aa11.54□□□□□ -0.56
DDX39B-216ENST00000462421 NBPF26B4DH59 902 aa11.53□□□□□ -0.56
DDX39B-216ENST00000462421 ALDH1B1P30837 517 aa11.53□□□□□ -0.56
DDX39B-216ENST00000462421 CCDC30Q5VVM6 783 aa11.53□□□□□ -0.56
DDX39B-216ENST00000462421 STYK1Q6J9G0 422 aa11.53□□□□□ -0.56
DDX39B-216ENST00000462421 NBPF10Q6P3W6 841 aaKnown RBP11.53□□□□□ -0.56
DDX39B-216ENST00000462421 NBPF15Q8N660 670 aa11.53□□□□□ -0.56
DDX39B-216ENST00000462421 BCL2L12Q9HB09 334 aa11.53□□□□□ -0.56
DDX39B-216ENST00000462421 DDX21Q9NR30 783 aaKnown RBP eCLIP11.53□□□□□ -0.56
DDX39B-216ENST00000462421 TRIM35Q9UPQ4 493 aa11.53□□□□□ -0.56
DDX39B-216ENST00000462421 LAMB4A4D0S4 1761 aa11.53□□□□□ -0.56
DDX39B-216ENST00000462421 KDM2BQ8NHM5 1336 aa11.53□□□□□ -0.56
DDX39B-216ENST00000462421 NPR1P16066 1061 aa11.52□□□□□ -0.57
DDX39B-216ENST00000462421 GPTP24298 496 aa11.52□□□□□ -0.57
DDX39B-216ENST00000462421 DUSP27Q5VZP5 1158 aa11.52□□□□□ -0.57
DDX39B-216ENST00000462421 UTP14AQ9BVJ6 771 aaKnown RBP11.52□□□□□ -0.57
DDX39B-216ENST00000462421 MBIPQ9NS73 344 aa11.52□□□□□ -0.57
DDX39B-216ENST00000462421 RNF181Q9P0P0 153 aa11.52□□□□□ -0.57
DDX39B-216ENST00000462421 KDM3BQ7LBC6 1761 aa11.51□□□□□ -0.57
DDX39B-216ENST00000462421 CCDC27Q2M243 656 aa11.51□□□□□ -0.57
DDX39B-216ENST00000462421 C9orf131Q5VYM1 1079 aa11.51□□□□□ -0.57
DDX39B-216ENST00000462421 GIGYF2Q6Y7W6 1299 aaKnown RBP11.51□□□□□ -0.57
DDX39B-216ENST00000462421 COPS6Q7L5N1 327 aa11.51□□□□□ -0.57
DDX39B-216ENST00000462421 RIC3Q7Z5B4 369 aa11.51□□□□□ -0.57
DDX39B-216ENST00000462421 CCDC24Q8N4L8 307 aa11.51□□□□□ -0.57
DDX39B-216ENST00000462421 XAGE3Q8WTP9 111 aa11.51□□□□□ -0.57
DDX39B-216ENST00000462421 RBM17Q96I25 401 aaKnown RBP11.51□□□□□ -0.57
DDX39B-216ENST00000462421 MYH16Q9H6N6 1097 aa11.51□□□□□ -0.57
DDX39B-216ENST00000462421 CHPF2Q9P2E5 772 aa11.51□□□□□ -0.57
DDX39B-216ENST00000462421 ZNF219Q9P2Y4 722 aaPredicted RBP11.51□□□□□ -0.57
DDX39B-216ENST00000462421 SALL2Q9Y467 1007 aaPredicted RBP11.51□□□□□ -0.57
DDX39B-216ENST00000462421 RNF123Q5XPI4 1314 aa11.51□□□□□ -0.57
DDX39B-216ENST00000462421 ATP10DQ9P241 1426 aa11.51□□□□□ -0.57
DDX39B-216ENST00000462421 DLG5Q8TDM6 1919 aa11.5□□□□□ -0.57
DDX39B-216ENST00000462421 LMNB1P20700 586 aa11.5□□□□□ -0.57
DDX39B-216ENST00000462421 NEXNQ0ZGT2 675 aa11.5□□□□□ -0.57
DDX39B-216ENST00000462421 CCDC93Q567U6 631 aa11.5□□□□□ -0.57
DDX39B-216ENST00000462421 TTLL7Q6ZT98 887 aa11.5□□□□□ -0.57
DDX39B-216ENST00000462421 NLRP3Q96P20 1036 aa11.5□□□□□ -0.57
DDX39B-216ENST00000462421 IBTKQ9P2D0 1353 aaPredicted RBP11.5□□□□□ -0.57
DDX39B-216ENST00000462421 ELL2O00472 640 aaPredicted RBP11.49□□□□□ -0.57
DDX39B-216ENST00000462421 C21orf2O43822 256 aa11.49□□□□□ -0.57
DDX39B-216ENST00000462421 HLFQ16534 295 aa11.49□□□□□ -0.57
DDX39B-216ENST00000462421 NCBP3Q53F19 620 aaKnown RBP11.49□□□□□ -0.57
DDX39B-216ENST00000462421 DPY19L2Q6NUT2 758 aa11.49□□□□□ -0.57
DDX39B-216ENST00000462421 PRPF40BQ6NWY9 871 aaKnown RBP11.49□□□□□ -0.57
DDX39B-216ENST00000462421 ANKRD13DQ6ZTN6 518 aa11.49□□□□□ -0.57
DDX39B-216ENST00000462421 PLBD2Q8NHP8 589 aa11.49□□□□□ -0.57
DDX39B-216ENST00000462421 TAOK3Q9H2K8 898 aa11.49□□□□□ -0.57
DDX39B-216ENST00000462421 TRMT112Q9UI30 125 aaKnown RBP11.49□□□□□ -0.57
DDX39B-216ENST00000462421 IL16Q14005 1332 aa11.49□□□□□ -0.57
DDX39B-216ENST00000462421 ZC3H4Q9UPT8 1303 aaKnown RBP11.49□□□□□ -0.57
DDX39B-216ENST00000462421 CHD4Q14839 1912 aa11.48□□□□□ -0.57
DDX39B-216ENST00000462421 ANXA1P04083 346 aa11.48□□□□□ -0.57
DDX39B-216ENST00000462421 SRGNP10124 158 aa11.48□□□□□ -0.57
DDX39B-216ENST00000462421 KCNA3P22001 575 aa11.48□□□□□ -0.57
DDX39B-216ENST00000462421 GRIPAP1Q4V328 841 aa11.48□□□□□ -0.57
DDX39B-216ENST00000462421 WWC1Q8IX03 1113 aa11.48□□□□□ -0.57
DDX39B-216ENST00000462421 RTKN2Q8IZC4 609 aa11.48□□□□□ -0.57
DDX39B-216ENST00000462421 KIF13BQ9NQT8 1826 aa11.47□□□□□ -0.57
DDX39B-216ENST00000462421 N4BP2Q86UW6 1770 aaPredicted RBP11.47□□□□□ -0.57
DDX39B-216ENST00000462421 SH3TC1Q8TE82 1336 aa11.47□□□□□ -0.57
DDX39B-216ENST00000462421 TWISTNBQ3B726 338 aaPredicted RBP11.47□□□□□ -0.57
DDX39B-216ENST00000462421 CC2D2BQ6DHV5 1058 aa11.47□□□□□ -0.57
DDX39B-216ENST00000462421 DDX46Q7L014 1031 aaKnown RBP11.47□□□□□ -0.57
DDX39B-216ENST00000462421 NUTM1Q86Y26 1132 aa11.47□□□□□ -0.57
DDX39B-216ENST00000462421 WDR63Q8IWG1 891 aa11.47□□□□□ -0.57
DDX39B-216ENST00000462421 BCORQ6W2J9 1755 aa11.46□□□□□ -0.57
DDX39B-216ENST00000462421 TCIRG1Q13488 830 aa11.46□□□□□ -0.57
DDX39B-216ENST00000462421 KRT24Q2M2I5 525 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms