RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 TIMELESSQ9UNS1 1208 aa8.33□□□□□ -1.08
VPS36-202ENST00000462289 TMEM94Q12767 1356 aa8.33□□□□□ -1.08
VPS36-202ENST00000462289 ROBO2Q9HCK4 1378 aa8.33□□□□□ -1.08
VPS36-202ENST00000462289 RALGAPBQ86X10 1494 aa8.32□□□□□ -1.08
VPS36-202ENST00000462289 INSM1Q01101 510 aaPredicted RBP8.32□□□□□ -1.08
VPS36-202ENST00000462289 CTDSPL2Q05D32 466 aa8.32□□□□□ -1.08
VPS36-202ENST00000462289 PPP2R2DQ66LE6 453 aa8.32□□□□□ -1.08
VPS36-202ENST00000462289 ITPKCQ96DU7 683 aa8.32□□□□□ -1.08
VPS36-202ENST00000462289 GPBP1L1Q9HC44 474 aaPredicted RBP8.32□□□□□ -1.08
VPS36-202ENST00000462289 ZIC2O95409 532 aaPredicted RBP8.31□□□□□ -1.08
VPS36-202ENST00000462289 SCARF1Q14162 830 aa8.31□□□□□ -1.08
VPS36-202ENST00000462289 DCAF11Q8TEB1 546 aa8.31□□□□□ -1.08
VPS36-202ENST00000462289 SLC16A10Q8TF71 515 aa8.31□□□□□ -1.08
VPS36-202ENST00000462289 BCANQ96GW7 911 aa8.31□□□□□ -1.08
VPS36-202ENST00000462289 DDRGK1Q96HY6 314 aa8.31□□□□□ -1.08
VPS36-202ENST00000462289 AMOTL2Q9Y2J4 779 aa8.31□□□□□ -1.08
VPS36-202ENST00000462289 FMN2Q9NZ56 1722 aa8.31□□□□□ -1.08
VPS36-202ENST00000462289 CFAP70Q5T0N1 1121 aa8.3□□□□□ -1.08
VPS36-202ENST00000462289 PURBQ96QR8 312 aaKnown RBP8.3□□□□□ -1.08
VPS36-202ENST00000462289 FAM117AQ9C073 453 aa8.3□□□□□ -1.08
VPS36-202ENST00000462289 ZFAND3Q9H8U3 227 aa8.3□□□□□ -1.08
VPS36-202ENST00000462289 PDXDC2PQ6P474 469 aa8.29□□□□□ -1.08
VPS36-202ENST00000462289 STK17AQ9UEE5 414 aa8.29□□□□□ -1.08
VPS36-202ENST00000462289 NHSL1Q5SYE7 1610 aa8.29□□□□□ -1.08
VPS36-202ENST00000462289 USP32Q8NFA0 1604 aa8.29□□□□□ -1.08
VPS36-202ENST00000462289 TOPAZ1Q8N9V7 1692 aa8.28□□□□□ -1.08
VPS36-202ENST00000462289 SBNO2Q9Y2G9 1366 aa8.28□□□□□ -1.08
VPS36-202ENST00000462289 H3BM21 787 aa8.28□□□□□ -1.08
VPS36-202ENST00000462289 FSHRP23945 695 aa8.28□□□□□ -1.08
VPS36-202ENST00000462289 NBPF8Q3BBV2 869 aa8.28□□□□□ -1.08
VPS36-202ENST00000462289 ERFEQ4G0M1 354 aa8.28□□□□□ -1.08
VPS36-202ENST00000462289 VASH1Q7L8A9 365 aaPredicted RBP8.28□□□□□ -1.08
VPS36-202ENST00000462289 MEIOBQ8N635 442 aa8.28□□□□□ -1.08
VPS36-202ENST00000462289 FBXO41Q8TF61 875 aa8.28□□□□□ -1.08
VPS36-202ENST00000462289 FKBPLQ9UIM3 349 aa8.28□□□□□ -1.08
VPS36-202ENST00000462289 AHDC1Q5TGY3 1603 aaPredicted RBP8.28□□□□□ -1.08
VPS36-202ENST00000462289 MST1RQ04912 1400 aa8.28□□□□□ -1.08
VPS36-202ENST00000462289 ZC3H4Q9UPT8 1303 aaKnown RBP8.28□□□□□ -1.08
VPS36-202ENST00000462289 ROBO1Q9Y6N7 1651 aa8.27□□□□□ -1.08
VPS36-202ENST00000462289 PROCA1Q8NCQ7 364 aaPredicted RBP8.27□□□□□ -1.09
VPS36-202ENST00000462289 LRRN4Q8WUT4 740 aa8.27□□□□□ -1.09
VPS36-202ENST00000462289 IRF7Q92985 503 aa8.27□□□□□ -1.09
VPS36-202ENST00000462289 RGPD8O14715 1765 aaPredicted RBP8.27□□□□□ -1.09
VPS36-202ENST00000462289 QRICH2Q9H0J4 1663 aa8.27□□□□□ -1.09
VPS36-202ENST00000462289 PLEKHH1Q9ULM0 1364 aa8.26□□□□□ -1.09
VPS36-202ENST00000462289 MAGEB6P1A0A0J9YX57 407 aa8.26□□□□□ -1.09
VPS36-202ENST00000462289 TMEM132EQ6IEE7 984 aa8.26□□□□□ -1.09
VPS36-202ENST00000462289 C19orf44Q9H6X5 657 aa8.26□□□□□ -1.09
VPS36-202ENST00000462289 MSH6P52701 1360 aa8.25□□□□□ -1.09
VPS36-202ENST00000462289 TONSLQ96HA7 1378 aa8.25□□□□□ -1.09
VPS36-202ENST00000462289 NBPF1Q3BBV0 1214 aa8.25□□□□□ -1.09
VPS36-202ENST00000462289 PROSER2Q86WR7 435 aaPredicted RBP8.25□□□□□ -1.09
VPS36-202ENST00000462289 CCDC116Q8IYX3 515 aa8.25□□□□□ -1.09
VPS36-202ENST00000462289 LINC00528Q8N1L1 170 aa8.25□□□□□ -1.09
VPS36-202ENST00000462289 EMILIN1Q9Y6C2 1016 aa8.25□□□□□ -1.09
VPS36-202ENST00000462289 COL16A1Q07092 1604 aaPredicted RBP8.25□□□□□ -1.09
VPS36-202ENST00000462289 KIF1AQ12756 1690 aa8.24□□□□□ -1.09
VPS36-202ENST00000462289 ITSN1Q15811 1721 aa8.24□□□□□ -1.09
VPS36-202ENST00000462289 ANKARQ7Z5J8 1434 aa8.24□□□□□ -1.09
VPS36-202ENST00000462289 GMPRP36959 345 aa8.24□□□□□ -1.09
VPS36-202ENST00000462289 NR6A1Q15406 480 aa8.24□□□□□ -1.09
VPS36-202ENST00000462289 CARD14Q9BXL6 1004 aa8.24□□□□□ -1.09
VPS36-202ENST00000462289 CDV3Q9UKY7 258 aaKnown RBP8.24□□□□□ -1.09
VPS36-202ENST00000462289 C1orf167Q5SNV9 1468 aa8.24□□□□□ -1.09
VPS36-202ENST00000462289 TULP4Q9NRJ4 1543 aa8.24□□□□□ -1.09
VPS36-202ENST00000462289 SOBPA7XYQ1 873 aa8.23□□□□□ -1.09
VPS36-202ENST00000462289 VSIG8P0DPA2 414 aa8.23□□□□□ -1.09
VPS36-202ENST00000462289 LORP23490 312 aaPredicted RBP8.23□□□□□ -1.09
VPS36-202ENST00000462289 VEGFBP49765 207 aa8.23□□□□□ -1.09
VPS36-202ENST00000462289 NEUROD1Q13562 356 aa8.23□□□□□ -1.09
VPS36-202ENST00000462289 OCSTAMPQ9BR26 566 aa8.23□□□□□ -1.09
VPS36-202ENST00000462289 ARHGAP9Q9BRR9 750 aa8.23□□□□□ -1.09
VPS36-202ENST00000462289 GPSM3Q9Y4H4 160 aa8.23□□□□□ -1.09
VPS36-202ENST00000462289 ATP7BP35670 1465 aa8.23□□□□□ -1.09
VPS36-202ENST00000462289 ERBB4Q15303 1308 aa8.23□□□□□ -1.09
VPS36-202ENST00000462289 TOM1O60784 492 aa8.22□□□□□ -1.09
VPS36-202ENST00000462289 UPP2O95045 317 aa8.22□□□□□ -1.09
VPS36-202ENST00000462289 C6orf118Q5T5N4 469 aa8.22□□□□□ -1.09
VPS36-202ENST00000462289 GOPCQ9HD26 462 aa8.22□□□□□ -1.09
VPS36-202ENST00000462289 SOS2Q07890 1332 aaPredicted RBP8.22□□□□□ -1.09
VPS36-202ENST00000462289 SHPRHQ149N8 1683 aa8.21□□□□□ -1.09
VPS36-202ENST00000462289 TRPM3Q9HCF6 1732 aaPredicted RBP8.21□□□□□ -1.09
VPS36-202ENST00000462289 Q6ZVU0 165 aa8.21□□□□□ -1.1
VPS36-202ENST00000462289 WAPLQ7Z5K2 1190 aa8.21□□□□□ -1.1
VPS36-202ENST00000462289 TSEN34Q9BSV6 310 aaKnown RBP8.21□□□□□ -1.1
VPS36-202ENST00000462289 SLAIN2Q9P270 581 aa8.21□□□□□ -1.1
VPS36-202ENST00000462289 ROCK2O75116 1388 aaKnown RBP8.21□□□□□ -1.1
VPS36-202ENST00000462289 AP1G2O75843 785 aa8.2□□□□□ -1.1
VPS36-202ENST00000462289 BMP2P12643 396 aa8.2□□□□□ -1.1
VPS36-202ENST00000462289 PPP1R26Q5T8A7 1209 aaPredicted RBP8.2□□□□□ -1.1
VPS36-202ENST00000462289 SLC10A4Q96EP9 437 aa8.2□□□□□ -1.1
VPS36-202ENST00000462289 PRAM1Q96QH2 718 aa8.2□□□□□ -1.1
VPS36-202ENST00000462289 KCTD15Q96SI1 283 aaPredicted RBP8.2□□□□□ -1.1
VPS36-202ENST00000462289 COL22A1Q8NFW1 1626 aaPredicted RBP8.2□□□□□ -1.1
VPS36-202ENST00000462289 PHLPP1O60346 1717 aa8.2□□□□□ -1.1
VPS36-202ENST00000462289 AKAP12Q02952 1782 aa8.2□□□□□ -1.1
VPS36-202ENST00000462289 PXDNQ92626 1479 aa8.19□□□□□ -1.1
VPS36-202ENST00000462289 ALS2Q96Q42 1657 aa8.19□□□□□ -1.1
VPS36-202ENST00000462289 UBAP1LF5GYI3 381 aa8.19□□□□□ -1.1
VPS36-202ENST00000462289 MAN1A2O60476 641 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms