RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 METTL22Q9BUU2 404 aaPredicted RBP13.5□□□□□ -0.25
RTF1-202ENST00000462276 MAP3K2Q9Y2U5 619 aa13.5□□□□□ -0.25
RTF1-202ENST00000462276 BTAF1O14981 1849 aa13.5□□□□□ -0.25
RTF1-202ENST00000462276 SBF2Q86WG5 1849 aa13.49□□□□□ -0.25
RTF1-202ENST00000462276 SSFA2P28290 1259 aa13.49□□□□□ -0.25
RTF1-202ENST00000462276 TRAPPC3LQ5T215 181 aa13.49□□□□□ -0.25
RTF1-202ENST00000462276 DZIP3Q86Y13 1208 aaKnown RBP13.49□□□□□ -0.25
RTF1-202ENST00000462276 PANK1Q8TE04 598 aa13.49□□□□□ -0.25
RTF1-202ENST00000462276 SRCIN1Q9C0H9 1055 aa13.49□□□□□ -0.25
RTF1-202ENST00000462276 ZNF652Q9Y2D9 606 aa13.49□□□□□ -0.25
RTF1-202ENST00000462276 ADCY9O60503 1353 aa13.48□□□□□ -0.25
RTF1-202ENST00000462276 F6X3S4 739 aa13.48□□□□□ -0.25
RTF1-202ENST00000462276 RLBP1P12271 317 aa13.48□□□□□ -0.25
RTF1-202ENST00000462276 PIP4K2AP48426 406 aaPredicted RBP13.48□□□□□ -0.25
RTF1-202ENST00000462276 KCNQ4P56696 695 aa13.48□□□□□ -0.25
RTF1-202ENST00000462276 EN1Q05925 392 aaPredicted RBP13.48□□□□□ -0.25
RTF1-202ENST00000462276 BEND3Q5T5X7 828 aa13.48□□□□□ -0.25
RTF1-202ENST00000462276 C20orf194Q5TEA3 1177 aa13.48□□□□□ -0.25
RTF1-202ENST00000462276 SLC4A10Q6U841 1118 aa13.48□□□□□ -0.25
RTF1-202ENST00000462276 GIGYF2Q6Y7W6 1299 aaKnown RBP13.48□□□□□ -0.25
RTF1-202ENST00000462276 TTLL7Q6ZT98 887 aa13.48□□□□□ -0.25
RTF1-202ENST00000462276 ITPRIPQ8IWB1 547 aa13.48□□□□□ -0.25
RTF1-202ENST00000462276 TMEM57Q8N5G2 664 aa13.48□□□□□ -0.25
RTF1-202ENST00000462276 ZNF330Q9Y3S2 320 aaPredicted RBP13.48□□□□□ -0.25
RTF1-202ENST00000462276 ATP10DQ9P241 1426 aa13.47□□□□□ -0.25
RTF1-202ENST00000462276 ZPR1O75312 459 aa13.47□□□□□ -0.25
RTF1-202ENST00000462276 TCIRG1Q13488 830 aa13.47□□□□□ -0.25
RTF1-202ENST00000462276 AKT1S1Q96B36 256 aa13.47□□□□□ -0.25
RTF1-202ENST00000462276 NARFQ9UHQ1 456 aa13.47□□□□□ -0.25
RTF1-202ENST00000462276 COG6Q9Y2V7 657 aa13.47□□□□□ -0.25
RTF1-202ENST00000462276 PXDNLA1KZ92 1463 aa13.47□□□□□ -0.25
RTF1-202ENST00000462276 CACNA1FO60840 1977 aa13.47□□□□□ -0.25
RTF1-202ENST00000462276 COL15A1P39059 1388 aa13.46□□□□□ -0.25
RTF1-202ENST00000462276 GNAI3P08754 354 aa13.46□□□□□ -0.25
RTF1-202ENST00000462276 RFC4P35249 363 aa13.46□□□□□ -0.25
RTF1-202ENST00000462276 FKBP8Q14318 412 aa13.46□□□□□ -0.25
RTF1-202ENST00000462276 EZH2Q15910 746 aaKnown RBP13.46□□□□□ -0.25
RTF1-202ENST00000462276 CCDC191Q8NCU4 936 aa13.46□□□□□ -0.25
RTF1-202ENST00000462276 ARXQ96QS3 562 aa13.46□□□□□ -0.25
RTF1-202ENST00000462276 TFCP2L1Q9NZI6 479 aa13.46□□□□□ -0.25
RTF1-202ENST00000462276 C5P01031 1676 aa13.46□□□□□ -0.26
RTF1-202ENST00000462276 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.45□□□□□ -0.26
RTF1-202ENST00000462276 ZBTB7BO15156 539 aaPredicted RBP13.45□□□□□ -0.26
RTF1-202ENST00000462276 CAMTA2O94983 1202 aa13.45□□□□□ -0.26
RTF1-202ENST00000462276 ARHGEF1Q92888 912 aaKnown RBP13.45□□□□□ -0.26
RTF1-202ENST00000462276 CRBNQ96SW2 442 aa13.45□□□□□ -0.26
RTF1-202ENST00000462276 ZBTB3Q9H5J0 574 aa13.45□□□□□ -0.26
RTF1-202ENST00000462276 STK32BQ9NY57 414 aa13.45□□□□□ -0.26
RTF1-202ENST00000462276 TBC1D2BQ9UPU7 963 aa13.45□□□□□ -0.26
RTF1-202ENST00000462276 LAMB4A4D0S4 1761 aa13.45□□□□□ -0.26
RTF1-202ENST00000462276 NEURL1BA8MQ27 555 aa13.44□□□□□ -0.26
RTF1-202ENST00000462276 HSP90B1P14625 803 aaKnown RBP13.44□□□□□ -0.26
RTF1-202ENST00000462276 PARP10Q53GL7 1025 aa13.44□□□□□ -0.26
RTF1-202ENST00000462276 ISCA1Q9BUE6 129 aa13.44□□□□□ -0.26
RTF1-202ENST00000462276 ZBTB40Q9NUA8 1239 aa13.44□□□□□ -0.26
RTF1-202ENST00000462276 TNNQ9UQP3 1299 aa13.44□□□□□ -0.26
RTF1-202ENST00000462276 LY75O60449 1722 aa13.44□□□□□ -0.26
RTF1-202ENST00000462276 IGKV5-2P06315 115 aa13.43□□□□□ -0.26
RTF1-202ENST00000462276 TJP1Q07157 1748 aa13.43□□□□□ -0.26
RTF1-202ENST00000462276 SLC15A2Q16348 729 aa13.43□□□□□ -0.26
RTF1-202ENST00000462276 DEFB132Q7Z7B7 95 aa13.43□□□□□ -0.26
RTF1-202ENST00000462276 MYD88Q99836 296 aa13.43□□□□□ -0.26
RTF1-202ENST00000462276 CWC25Q9NXE8 425 aaPredicted RBP13.43□□□□□ -0.26
RTF1-202ENST00000462276 C9orf78Q9NZ63 289 aaPredicted RBP13.43□□□□□ -0.26
RTF1-202ENST00000462276 UTYO14607 1347 aa13.42□□□□□ -0.26
RTF1-202ENST00000462276 USP42Q9H9J4 1324 aaKnown RBP13.42□□□□□ -0.26
RTF1-202ENST00000462276 GRM8O00222 908 aa13.42□□□□□ -0.26
RTF1-202ENST00000462276 GCKRQ14397 625 aa13.42□□□□□ -0.26
RTF1-202ENST00000462276 ZNF34Q8IZ26 560 aa13.42□□□□□ -0.26
RTF1-202ENST00000462276 EXOC6Q8TAG9 804 aa13.42□□□□□ -0.26
RTF1-202ENST00000462276 USP44Q9H0E7 712 aa13.42□□□□□ -0.26
RTF1-202ENST00000462276 RGPD3A6NKT7 1758 aaPredicted RBP13.42□□□□□ -0.26
RTF1-202ENST00000462276 RGPD4Q7Z3J3 1758 aa13.42□□□□□ -0.26
RTF1-202ENST00000462276 GNAI2P04899 355 aa13.41□□□□□ -0.26
RTF1-202ENST00000462276 UBTFL1P0CB47 393 aaPredicted RBP13.41□□□□□ -0.26
RTF1-202ENST00000462276 IRX6P78412 446 aaPredicted RBP13.41□□□□□ -0.26
RTF1-202ENST00000462276 HLFQ16534 295 aa13.41□□□□□ -0.26
RTF1-202ENST00000462276 NLGN1Q8N2Q7 840 aa13.41□□□□□ -0.26
RTF1-202ENST00000462276 RREB1Q92766 1687 aa13.4□□□□□ -0.26
RTF1-202ENST00000462276 ATP5J2-PTCD1G3V325 749 aa13.4□□□□□ -0.26
RTF1-202ENST00000462276 H7C1W4 665 aa13.4□□□□□ -0.26
RTF1-202ENST00000462276 PHF14O94880 888 aa13.4□□□□□ -0.26
RTF1-202ENST00000462276 ZNF827Q17R98 1081 aa13.4□□□□□ -0.26
RTF1-202ENST00000462276 CWF19L2Q2TBE0 894 aaKnown RBP13.4□□□□□ -0.26
RTF1-202ENST00000462276 USPL1Q5W0Q7 1092 aa13.4□□□□□ -0.26
RTF1-202ENST00000462276 PPP1R42Q7Z4L9 355 aa13.4□□□□□ -0.26
RTF1-202ENST00000462276 NLRP10Q86W26 655 aa13.4□□□□□ -0.26
RTF1-202ENST00000462276 SETDB2Q96T68 719 aa13.4□□□□□ -0.26
RTF1-202ENST00000462276 PPP4R2Q9NY27 417 aa13.4□□□□□ -0.26
RTF1-202ENST00000462276 C4BP0C0L5 1744 aa13.39□□□□□ -0.27
RTF1-202ENST00000462276 TNS1Q9HBL0 1735 aaKnown RBP13.39□□□□□ -0.27
RTF1-202ENST00000462276 PCCAP05165 728 aaPredicted RBP13.39□□□□□ -0.27
RTF1-202ENST00000462276 RPAP2Q8IXW5 612 aaPredicted RBP13.39□□□□□ -0.27
RTF1-202ENST00000462276 ZBTB38Q8NAP3 1195 aaPredicted RBP13.39□□□□□ -0.27
RTF1-202ENST00000462276 SLC16A10Q8TF71 515 aa13.39□□□□□ -0.27
RTF1-202ENST00000462276 NYXQ9GZU5 481 aa13.39□□□□□ -0.27
RTF1-202ENST00000462276 NIP7Q9Y221 180 aaKnown RBP eCLIP13.39□□□□□ -0.27
RTF1-202ENST00000462276 GTF3C3Q9Y5Q9 886 aa13.39□□□□□ -0.27
RTF1-202ENST00000462276 COL5A3P25940 1745 aaPredicted RBP13.39□□□□□ -0.27
RTF1-202ENST00000462276 AMIGO3Q86WK7 504 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms