RNA–Protein interactions for RNA: ENST00000462080.1

GPCPD1-203, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 2

Gene GPCPD1, Length 633 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-203ENST00000462080 MKRN1Q9UHC7 482 aaKnown RBP11.33□□□□□ -0.6
GPCPD1-203ENST00000462080 PRR12Q9ULL5 1215 aa11.33□□□□□ -0.6
GPCPD1-203ENST00000462080 PROCP04070 461 aa11.32□□□□□ -0.6
GPCPD1-203ENST00000462080 PCBP4P57723 403 aaKnown RBP11.32□□□□□ -0.6
GPCPD1-203ENST00000462080 GRIN2CQ14957 1233 aa11.32□□□□□ -0.6
GPCPD1-203ENST00000462080 SH3PXD2AQ5TCZ1 1133 aa11.32□□□□□ -0.6
GPCPD1-203ENST00000462080 LRRC69Q6ZNQ3 347 aa11.32□□□□□ -0.6
GPCPD1-203ENST00000462080 CHSY3Q70JA7 882 aa11.32□□□□□ -0.6
GPCPD1-203ENST00000462080 LARGE2Q8N3Y3 721 aa11.32□□□□□ -0.6
GPCPD1-203ENST00000462080 SUV39H2Q9H5I1 410 aa11.32□□□□□ -0.6
GPCPD1-203ENST00000462080 PALM3A6NDB9 673 aaPredicted RBP11.31□□□□□ -0.6
GPCPD1-203ENST00000462080 PSMA6P60900 246 aaKnown RBP11.31□□□□□ -0.6
GPCPD1-203ENST00000462080 C7orf43Q8WVR3 580 aa11.31□□□□□ -0.6
GPCPD1-203ENST00000462080 CLUAP1Q96AJ1 413 aa11.31□□□□□ -0.6
GPCPD1-203ENST00000462080 TSPAN10Q9H1Z9 355 aaPredicted RBP11.31□□□□□ -0.6
GPCPD1-203ENST00000462080 NEUROD4Q9HD90 331 aa11.31□□□□□ -0.6
GPCPD1-203ENST00000462080 M0R2N6 131 aa11.3□□□□□ -0.6
GPCPD1-203ENST00000462080 PROSER2Q86WR7 435 aaPredicted RBP11.3□□□□□ -0.6
GPCPD1-203ENST00000462080 SIX5Q8N196 739 aa11.3□□□□□ -0.6
GPCPD1-203ENST00000462080 TMEM132AQ24JP5 1023 aa11.29□□□□□ -0.6
GPCPD1-203ENST00000462080 FNBP4Q8N3X1 1017 aaPredicted RBP11.29□□□□□ -0.6
GPCPD1-203ENST00000462080 RHPN1Q8TCX5 695 aa11.29□□□□□ -0.6
GPCPD1-203ENST00000462080 GLMNQ92990 594 aa11.29□□□□□ -0.6
GPCPD1-203ENST00000462080 ZNF594Q96JF6 807 aaPredicted RBP11.29□□□□□ -0.6
GPCPD1-203ENST00000462080 CHMP3Q9Y3E7 222 aa11.29□□□□□ -0.6
GPCPD1-203ENST00000462080 HIRAP54198 1017 aaPredicted RBP11.27□□□□□ -0.61
GPCPD1-203ENST00000462080 C1orf53Q5VUE5 145 aa11.27□□□□□ -0.61
GPCPD1-203ENST00000462080 POTEAQ6S8J7 498 aa11.27□□□□□ -0.61
GPCPD1-203ENST00000462080 TSEN2Q8NCE0 465 aaKnown RBP11.27□□□□□ -0.61
GPCPD1-203ENST00000462080 NOP53Q9NZM5 478 aaKnown RBP11.27□□□□□ -0.61
GPCPD1-203ENST00000462080 RBM19Q9Y4C8 960 aaKnown RBP11.27□□□□□ -0.61
GPCPD1-203ENST00000462080 SFI1A8K8P3 1242 aa11.26□□□□□ -0.61
GPCPD1-203ENST00000462080 DKK1O94907 266 aa11.25□□□□□ -0.61
GPCPD1-203ENST00000462080 SYT9Q86SS6 491 aa11.25□□□□□ -0.61
GPCPD1-203ENST00000462080 PHACTR1Q9C0D0 580 aa11.25□□□□□ -0.61
GPCPD1-203ENST00000462080 TFIP11Q9UBB9 837 aaKnown RBP11.25□□□□□ -0.61
GPCPD1-203ENST00000462080 HCN4Q9Y3Q4 1203 aa11.25□□□□□ -0.61
GPCPD1-203ENST00000462080 MAFBQ9Y5Q3 323 aaPredicted RBP11.25□□□□□ -0.61
GPCPD1-203ENST00000462080 RASA1P20936 1047 aa11.24□□□□□ -0.61
GPCPD1-203ENST00000462080 SFSWAPQ12872 951 aaKnown RBP11.24□□□□□ -0.61
GPCPD1-203ENST00000462080 ELOA3CA0A087WX78 387 aaPredicted RBP11.23□□□□□ -0.61
GPCPD1-203ENST00000462080 ELOA3DA6NLF2 546 aaPredicted RBP11.23□□□□□ -0.61
GPCPD1-203ENST00000462080 PPP1R12BO60237 982 aaPredicted RBP11.23□□□□□ -0.61
GPCPD1-203ENST00000462080 ELOA3BQ3SY89 546 aa11.23□□□□□ -0.61
GPCPD1-203ENST00000462080 ELOA3Q8NG57 546 aa11.23□□□□□ -0.61
GPCPD1-203ENST00000462080 HSH2DQ96JZ2 352 aa11.23□□□□□ -0.61
GPCPD1-203ENST00000462080 C21orf2O43822 256 aa11.22□□□□□ -0.61
GPCPD1-203ENST00000462080 ADAM23O75077 832 aa11.22□□□□□ -0.61
GPCPD1-203ENST00000462080 SIN3BO75182 1162 aa11.22□□□□□ -0.61
GPCPD1-203ENST00000462080 MDFIQ99750 246 aa11.22□□□□□ -0.61
GPCPD1-203ENST00000462080 ANKIB1Q9P2G1 1089 aa11.22□□□□□ -0.61
GPCPD1-203ENST00000462080 ALAS2P22557 587 aa11.21□□□□□ -0.61
GPCPD1-203ENST00000462080 CEP63Q96MT8 703 aa11.21□□□□□ -0.61
GPCPD1-203ENST00000462080 SLC30A3Q99726 388 aa11.21□□□□□ -0.61
GPCPD1-203ENST00000462080 BRD7Q9NPI1 651 aa11.21□□□□□ -0.61
GPCPD1-203ENST00000462080 BAG6P46379 1132 aa11.2□□□□□ -0.62
GPCPD1-203ENST00000462080 SEC13P55735 322 aa11.2□□□□□ -0.62
GPCPD1-203ENST00000462080 ATAD2Q6PL18 1390 aa11.19□□□□□ -0.62
GPCPD1-203ENST00000462080 ADARB2-AS1A8MUL3 147 aa11.19□□□□□ -0.62
GPCPD1-203ENST00000462080 SPEM2Q0P670 501 aa11.19□□□□□ -0.62
GPCPD1-203ENST00000462080 STAG2Q8N3U4 1231 aa11.19□□□□□ -0.62
GPCPD1-203ENST00000462080 TRIM11Q96F44 468 aa11.19□□□□□ -0.62
GPCPD1-203ENST00000462080 SUSD3Q96L08 255 aa11.19□□□□□ -0.62
GPCPD1-203ENST00000462080 CALR3Q96L12 384 aaKnown RBP11.19□□□□□ -0.62
GPCPD1-203ENST00000462080 C1QTNF9BB2RNN3 333 aa11.18□□□□□ -0.62
GPCPD1-203ENST00000462080 TYRO3Q06418 890 aa11.18□□□□□ -0.62
GPCPD1-203ENST00000462080 LARP1Q6PKG0 1096 aaKnown RBP11.18□□□□□ -0.62
GPCPD1-203ENST00000462080 ZNF280CQ8ND82 737 aa11.18□□□□□ -0.62
GPCPD1-203ENST00000462080 SCG3Q8WXD2 468 aaKnown RBP11.18□□□□□ -0.62
GPCPD1-203ENST00000462080 C2orf49Q9BVC5 232 aaPredicted RBP11.18□□□□□ -0.62
GPCPD1-203ENST00000462080 PPP1R12CQ9BZL4 782 aa11.18□□□□□ -0.62
GPCPD1-203ENST00000462080 A6NJR5 290 aa11.17□□□□□ -0.62
GPCPD1-203ENST00000462080 KCNQ4P56696 695 aa11.17□□□□□ -0.62
GPCPD1-203ENST00000462080 NEUROD1Q13562 356 aa11.17□□□□□ -0.62
GPCPD1-203ENST00000462080 CD163Q86VB7 1156 aa11.17□□□□□ -0.62
GPCPD1-203ENST00000462080 ALDH16A1Q8IZ83 802 aa11.17□□□□□ -0.62
GPCPD1-203ENST00000462080 GAS2L2Q8NHY3 880 aa11.17□□□□□ -0.62
GPCPD1-203ENST00000462080 TNFRSF25Q93038 417 aa11.17□□□□□ -0.62
GPCPD1-203ENST00000462080 PLVAPQ9BX97 442 aa11.17□□□□□ -0.62
GPCPD1-203ENST00000462080 CHRNA4P43681 627 aa11.16□□□□□ -0.62
GPCPD1-203ENST00000462080 RAB44Q7Z6P3 723 aaPredicted RBP11.16□□□□□ -0.62
GPCPD1-203ENST00000462080 CHMP7Q8WUX9 453 aaPredicted RBP11.16□□□□□ -0.62
GPCPD1-203ENST00000462080 KCNH4Q9UQ05 1017 aa11.16□□□□□ -0.62
GPCPD1-203ENST00000462080 PTK7Q13308 1070 aa11.15□□□□□ -0.62
GPCPD1-203ENST00000462080 HIF1AQ16665 826 aa11.15□□□□□ -0.62
GPCPD1-203ENST00000462080 CRTC2Q53ET0 693 aaPredicted RBP11.15□□□□□ -0.62
GPCPD1-203ENST00000462080 K7ELQ4 463 aaPredicted RBP11.14□□□□□ -0.63
GPCPD1-203ENST00000462080 KANK4Q5T7N3 995 aaPredicted RBP11.14□□□□□ -0.63
GPCPD1-203ENST00000462080 NGLY1Q96IV0 654 aa11.14□□□□□ -0.63
GPCPD1-203ENST00000462080 DPYDQ12882 1025 aa11.13□□□□□ -0.63
GPCPD1-203ENST00000462080 BTLAQ7Z6A9 289 aa11.13□□□□□ -0.63
GPCPD1-203ENST00000462080 HINFPQ9BQA5 517 aa11.13□□□□□ -0.63
GPCPD1-203ENST00000462080 USP17L15C9J2P7 530 aa11.12□□□□□ -0.63
GPCPD1-203ENST00000462080 USP17L10C9JJH3 530 aa11.12□□□□□ -0.63
GPCPD1-203ENST00000462080 USP17L13C9JLJ4 530 aa11.12□□□□□ -0.63
GPCPD1-203ENST00000462080 USP17L12C9JPN9 530 aa11.12□□□□□ -0.63
GPCPD1-203ENST00000462080 USP17L11C9JVI0 530 aa11.12□□□□□ -0.63
GPCPD1-203ENST00000462080 USP17L21D6R901 530 aa11.12□□□□□ -0.63
GPCPD1-203ENST00000462080 USP17L18D6R9N7 530 aa11.12□□□□□ -0.63
GPCPD1-203ENST00000462080 USP17L22D6RA61 530 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms