RNA–Protein interactions for RNA: ENST00000461934.5

UBA3-205, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,224 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-205ENST00000461934 BRIP1Q9BX63 1249 aa17.51■□□□□ 0.39
UBA3-205ENST00000461934 PRAMEF22A3QJZ6 481 aa17.5■□□□□ 0.39
UBA3-205ENST00000461934 PRR5LQ6MZQ0 368 aa17.5■□□□□ 0.39
UBA3-205ENST00000461934 CCDC24Q8N4L8 307 aa17.5■□□□□ 0.39
UBA3-205ENST00000461934 LMNB1P20700 586 aa17.49■□□□□ 0.39
UBA3-205ENST00000461934 ZC3H4Q9UPT8 1303 aaKnown RBP17.48■□□□□ 0.39
UBA3-205ENST00000461934 CLEC4GQ6UXB4 293 aa17.48■□□□□ 0.39
UBA3-205ENST00000461934 NBPF5PQ86XG9 351 aaPredicted RBP17.48■□□□□ 0.39
UBA3-205ENST00000461934 ZNF219Q9P2Y4 722 aaPredicted RBP17.48■□□□□ 0.39
UBA3-205ENST00000461934 APLP1P51693 650 aa17.47■□□□□ 0.39
UBA3-205ENST00000461934 NFE2L2Q16236 605 aa17.47■□□□□ 0.39
UBA3-205ENST00000461934 CNKSR1Q969H4 720 aa17.47■□□□□ 0.39
UBA3-205ENST00000461934 RRAGCQ9HB90 399 aa17.47■□□□□ 0.39
UBA3-205ENST00000461934 MIS18AQ9NYP9 233 aa17.47■□□□□ 0.39
UBA3-205ENST00000461934 GTF2E1P29083 439 aaPredicted RBP17.46■□□□□ 0.39
UBA3-205ENST00000461934 RALBP1Q15311 655 aa17.46■□□□□ 0.39
UBA3-205ENST00000461934 ANKRD36CQ5JPF3 1778 aa17.45■□□□□ 0.38
UBA3-205ENST00000461934 C21orf2O43822 256 aa17.45■□□□□ 0.38
UBA3-205ENST00000461934 NGEFQ8N5V2 710 aa17.45■□□□□ 0.38
UBA3-205ENST00000461934 RBM46Q8TBY0 533 aaKnown RBP17.45■□□□□ 0.38
UBA3-205ENST00000461934 MASTLQ96GX5 879 aa17.45■□□□□ 0.38
UBA3-205ENST00000461934 PLEKHF1Q96S99 279 aa17.45■□□□□ 0.38
UBA3-205ENST00000461934 NIP7Q9Y221 180 aaKnown RBP eCLIP17.45■□□□□ 0.38
UBA3-205ENST00000461934 FAM177BA6PVY3 158 aa17.44■□□□□ 0.38
UBA3-205ENST00000461934 STYK1Q6J9G0 422 aa17.44■□□□□ 0.38
UBA3-205ENST00000461934 TPTE2Q6XPS3 522 aa17.44■□□□□ 0.38
UBA3-205ENST00000461934 SOGA3Q5TF21 947 aa17.43■□□□□ 0.38
UBA3-205ENST00000461934 DPY19L2Q6NUT2 758 aa17.43■□□□□ 0.38
UBA3-205ENST00000461934 KIF6Q6ZMV9 814 aa17.43■□□□□ 0.38
UBA3-205ENST00000461934 GLTPD2A6NH11 291 aa17.42■□□□□ 0.38
UBA3-205ENST00000461934 NBPF26B4DH59 902 aa17.42■□□□□ 0.38
UBA3-205ENST00000461934 RGL2O15211 777 aa17.42■□□□□ 0.38
UBA3-205ENST00000461934 SRGNP10124 158 aa17.42■□□□□ 0.38
UBA3-205ENST00000461934 NBPF10Q6P3W6 841 aaKnown RBP17.42■□□□□ 0.38
UBA3-205ENST00000461934 NBPF15Q8N660 670 aa17.42■□□□□ 0.38
UBA3-205ENST00000461934 THUMPD2Q9BTF0 503 aaKnown RBP17.42■□□□□ 0.38
UBA3-205ENST00000461934 RRP7AQ9Y3A4 280 aaKnown RBP17.42■□□□□ 0.38
UBA3-205ENST00000461934 NFKBIEO00221 500 aa17.41■□□□□ 0.38
UBA3-205ENST00000461934 LMOD3Q0VAK6 560 aa17.41■□□□□ 0.38
UBA3-205ENST00000461934 FSTL1Q12841 308 aa17.41■□□□□ 0.38
UBA3-205ENST00000461934 DDX10Q13206 875 aaKnown RBP17.41■□□□□ 0.38
UBA3-205ENST00000461934 ERFEQ4G0M1 354 aa17.41■□□□□ 0.38
UBA3-205ENST00000461934 PRPF40BQ6NWY9 871 aaKnown RBP17.41■□□□□ 0.38
UBA3-205ENST00000461934 TAOK3Q9H2K8 898 aa17.41■□□□□ 0.38
UBA3-205ENST00000461934 TSPYL4Q9UJ04 414 aa17.41■□□□□ 0.38
UBA3-205ENST00000461934 SCN4AP35499 1836 aa17.41■□□□□ 0.38
UBA3-205ENST00000461934 MYL6BP14649 208 aa17.4■□□□□ 0.38
UBA3-205ENST00000461934 VEGFAP15692 232 aaPredicted RBP17.4■□□□□ 0.38
UBA3-205ENST00000461934 RIPK4P57078 832 aa17.4■□□□□ 0.38
UBA3-205ENST00000461934 EIF4A1P60842 406 aaKnown RBP17.4■□□□□ 0.38
UBA3-205ENST00000461934 NYXQ9GZU5 481 aa17.4■□□□□ 0.38
UBA3-205ENST00000461934 NPR1P16066 1061 aa17.39■□□□□ 0.37
UBA3-205ENST00000461934 SMC1BQ8NDV3 1235 aa17.39■□□□□ 0.37
UBA3-205ENST00000461934 MYBBP1AQ9BQG0 1328 aaKnown RBP17.39■□□□□ 0.37
UBA3-205ENST00000461934 WDR43Q15061 677 aaKnown RBP eCLIP17.38■□□□□ 0.37
UBA3-205ENST00000461934 HLFQ16534 295 aa17.38■□□□□ 0.37
UBA3-205ENST00000461934 MAP3K15Q6ZN16 1313 aa17.38■□□□□ 0.37
UBA3-205ENST00000461934 LTBP3Q9NS15 1303 aa17.38■□□□□ 0.37
UBA3-205ENST00000461934 LAMB2P55268 1798 aa17.38■□□□□ 0.37
UBA3-205ENST00000461934 ERVV-1B6SEH8 477 aa17.37■□□□□ 0.37
UBA3-205ENST00000461934 PRELPP51888 382 aa17.37■□□□□ 0.37
UBA3-205ENST00000461934 CCDC93Q567U6 631 aa17.37■□□□□ 0.37
UBA3-205ENST00000461934 RNF39Q9H2S5 420 aa17.37■□□□□ 0.37
UBA3-205ENST00000461934 CEP350Q5VT06 3117 aa17.36■□□□□ 0.37
UBA3-205ENST00000461934 ALDH1B1P30837 517 aa17.36■□□□□ 0.37
UBA3-205ENST00000461934 ERBB4Q15303 1308 aa17.36■□□□□ 0.37
UBA3-205ENST00000461934 EIF2S2P20042 333 aaKnown RBP17.35■□□□□ 0.37
UBA3-205ENST00000461934 TMPOP42166 694 aaKnown RBP17.35■□□□□ 0.37
UBA3-205ENST00000461934 NEUROD2Q15784 382 aa17.35■□□□□ 0.37
UBA3-205ENST00000461934 ZBTB3Q9H5J0 574 aa17.35■□□□□ 0.37
UBA3-205ENST00000461934 GPTP24298 496 aa17.34■□□□□ 0.37
UBA3-205ENST00000461934 CCDC146Q8IYE0 955 aa17.34■□□□□ 0.37
UBA3-205ENST00000461934 RPGRQ92834 1020 aaKnown RBP17.34■□□□□ 0.37
UBA3-205ENST00000461934 TTLL7Q6ZT98 887 aa17.33■□□□□ 0.36
UBA3-205ENST00000461934 PPP1R42Q7Z4L9 355 aa17.33■□□□□ 0.36
UBA3-205ENST00000461934 NUTM1Q86Y26 1132 aa17.33■□□□□ 0.36
UBA3-205ENST00000461934 RTKN2Q8IZC4 609 aa17.33■□□□□ 0.36
UBA3-205ENST00000461934 BABAM1Q9NWV8 329 aa17.33■□□□□ 0.36
UBA3-205ENST00000461934 LAS1LQ9Y4W2 734 aaKnown RBP17.33■□□□□ 0.36
UBA3-205ENST00000461934 IBTKQ9P2D0 1353 aaPredicted RBP17.31■□□□□ 0.36
UBA3-205ENST00000461934 KLRG2A4D1S0 409 aaPredicted RBP17.31■□□□□ 0.36
UBA3-205ENST00000461934 FKBP4Q02790 459 aaKnown RBP eCLIP17.31■□□□□ 0.36
UBA3-205ENST00000461934 GIGYF2Q6Y7W6 1299 aaKnown RBP17.31■□□□□ 0.36
UBA3-205ENST00000461934 RUNDC1Q96C34 613 aa17.31■□□□□ 0.36
UBA3-205ENST00000461934 TMX4Q9H1E5 349 aaPredicted RBP17.3■□□□□ 0.36
UBA3-205ENST00000461934 TAF1P21675 1872 aa17.3■□□□□ 0.36
UBA3-205ENST00000461934 ABCC12Q96J65 1359 aa17.29■□□□□ 0.36
UBA3-205ENST00000461934 IQCA1LA6NCM1 817 aa17.29■□□□□ 0.36
UBA3-205ENST00000461934 DDNO94850 711 aaPredicted RBP17.29■□□□□ 0.36
UBA3-205ENST00000461934 HTRA3P83110 453 aa17.29■□□□□ 0.36
UBA3-205ENST00000461934 PARP10Q53GL7 1025 aa17.29■□□□□ 0.36
UBA3-205ENST00000461934 NECTIN2Q92692 538 aa17.29■□□□□ 0.36
UBA3-205ENST00000461934 RBM17Q96I25 401 aaKnown RBP17.29■□□□□ 0.36
UBA3-205ENST00000461934 ZNF277Q9NRM2 450 aaPredicted RBP17.29■□□□□ 0.36
UBA3-205ENST00000461934 RIC1Q4ADV7 1423 aa17.29■□□□□ 0.36
UBA3-205ENST00000461934 UBN2Q6ZU65 1347 aa17.28■□□□□ 0.36
UBA3-205ENST00000461934 AIMP1Q12904 312 aaKnown RBP17.28■□□□□ 0.36
UBA3-205ENST00000461934 SUSD4Q5VX71 490 aa17.28■□□□□ 0.36
UBA3-205ENST00000461934 DNAJC5GQ8N7S2 189 aa17.28■□□□□ 0.36
UBA3-205ENST00000461934 C7orf43Q8WVR3 580 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms