RNA–Protein interactions for RNA: ENST00000460810.1

CCDC58-202, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-202ENST00000460810 PRRT3Q5FWE3 981 aa7.63□□□□□ -1.19
CCDC58-202ENST00000460810 HOMEZQ8IX15 550 aa7.63□□□□□ -1.19
CCDC58-202ENST00000460810 C7orf43Q8WVR3 580 aa7.63□□□□□ -1.19
CCDC58-202ENST00000460810 KRTAP4-8Q9BYQ9 185 aa7.63□□□□□ -1.19
CCDC58-202ENST00000460810 NEUROD4Q9HD90 331 aa7.63□□□□□ -1.19
CCDC58-202ENST00000460810 PRDM6Q9NQX0 595 aa7.63□□□□□ -1.19
CCDC58-202ENST00000460810 SKIP12755 728 aa7.62□□□□□ -1.19
CCDC58-202ENST00000460810 EPHA4P54764 986 aa7.62□□□□□ -1.19
CCDC58-202ENST00000460810 LRRC69Q6ZNQ3 347 aa7.62□□□□□ -1.19
CCDC58-202ENST00000460810 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.62□□□□□ -1.19
CCDC58-202ENST00000460810 TNFRSF25Q93038 417 aa7.62□□□□□ -1.19
CCDC58-202ENST00000460810 ALG2Q9H553 416 aa7.62□□□□□ -1.19
CCDC58-202ENST00000460810 PSME1Q06323 249 aa7.61□□□□□ -1.19
CCDC58-202ENST00000460810 MCM6Q14566 821 aa7.61□□□□□ -1.19
CCDC58-202ENST00000460810 APBA3O96018 575 aa7.6□□□□□ -1.19
CCDC58-202ENST00000460810 NEUROD1Q13562 356 aa7.6□□□□□ -1.19
CCDC58-202ENST00000460810 NCOA4Q13772 614 aa7.6□□□□□ -1.19
CCDC58-202ENST00000460810 RSPO4Q2I0M5 234 aaPredicted RBP7.6□□□□□ -1.19
CCDC58-202ENST00000460810 SLC9A9Q8IVB4 645 aa7.6□□□□□ -1.19
CCDC58-202ENST00000460810 ZNF232Q9UNY5 417 aa7.6□□□□□ -1.19
CCDC58-202ENST00000460810 SERTM1A2A2V5 107 aa7.59□□□□□ -1.19
CCDC58-202ENST00000460810 M0R082 166 aa7.59□□□□□ -1.19
CCDC58-202ENST00000460810 COL9A3Q14050 684 aaPredicted RBP7.59□□□□□ -1.19
CCDC58-202ENST00000460810 NKAPLQ5M9Q1 402 aa7.59□□□□□ -1.19
CCDC58-202ENST00000460810 ZMYM1Q5SVZ6 1142 aa7.59□□□□□ -1.19
CCDC58-202ENST00000460810 WWC1Q8IX03 1113 aa7.59□□□□□ -1.19
CCDC58-202ENST00000460810 ZNF417Q8TAU3 575 aa7.59□□□□□ -1.19
CCDC58-202ENST00000460810 NACC1Q96RE7 527 aa7.59□□□□□ -1.19
CCDC58-202ENST00000460810 ZNF587Q96SQ5 575 aaPredicted RBP7.59□□□□□ -1.19
CCDC58-202ENST00000460810 COG6Q9Y2V7 657 aa7.59□□□□□ -1.19
CCDC58-202ENST00000460810 SFSWAPQ12872 951 aaKnown RBP7.58□□□□□ -1.2
CCDC58-202ENST00000460810 TRIM28Q13263 835 aaKnown RBP7.58□□□□□ -1.2
CCDC58-202ENST00000460810 C1orf53Q5VUE5 145 aa7.58□□□□□ -1.2
CCDC58-202ENST00000460810 TRIM50Q86XT4 487 aa7.58□□□□□ -1.2
CCDC58-202ENST00000460810 TNS4Q8IZW8 715 aa7.58□□□□□ -1.2
CCDC58-202ENST00000460810 MICALL1Q8N3F8 863 aa7.58□□□□□ -1.2
CCDC58-202ENST00000460810 SLC30A3Q99726 388 aa7.58□□□□□ -1.2
CCDC58-202ENST00000460810 ANKIB1Q9P2G1 1089 aa7.58□□□□□ -1.2
CCDC58-202ENST00000460810 STARD13Q9Y3M8 1113 aa7.58□□□□□ -1.2
CCDC58-202ENST00000460810 KCNQ4P56696 695 aa7.57□□□□□ -1.2
CCDC58-202ENST00000460810 POTEAQ6S8J7 498 aa7.57□□□□□ -1.2
CCDC58-202ENST00000460810 RHPN1Q8TCX5 695 aa7.57□□□□□ -1.2
CCDC58-202ENST00000460810 TPSG1Q9NRR2 321 aa7.57□□□□□ -1.2
CCDC58-202ENST00000460810 USP17L5A8MUK1 530 aa7.56□□□□□ -1.2
CCDC58-202ENST00000460810 HIRAP54198 1017 aaPredicted RBP7.56□□□□□ -1.2
CCDC58-202ENST00000460810 PSMA6P60900 246 aaKnown RBP7.56□□□□□ -1.2
CCDC58-202ENST00000460810 SPEM2Q0P670 501 aa7.56□□□□□ -1.2
CCDC58-202ENST00000460810 PSMG3-AS1Q96PY0 264 aa7.56□□□□□ -1.2
CCDC58-202ENST00000460810 CHMP3Q9Y3E7 222 aa7.56□□□□□ -1.2
CCDC58-202ENST00000460810 ZBTB7BO15156 539 aaPredicted RBP7.55□□□□□ -1.2
CCDC58-202ENST00000460810 ALBP02768 609 aa7.55□□□□□ -1.2
CCDC58-202ENST00000460810 NID1P14543 1247 aa7.55□□□□□ -1.2
CCDC58-202ENST00000460810 ADH7P40394 386 aa7.55□□□□□ -1.2
CCDC58-202ENST00000460810 ATP1A2P50993 1020 aa7.55□□□□□ -1.2
CCDC58-202ENST00000460810 TBCELQ5QJ74 424 aa7.55□□□□□ -1.2
CCDC58-202ENST00000460810 BRD7Q9NPI1 651 aa7.55□□□□□ -1.2
CCDC58-202ENST00000460810 M0R2N6 131 aa7.54□□□□□ -1.2
CCDC58-202ENST00000460810 SH3PXD2AQ5TCZ1 1133 aa7.54□□□□□ -1.2
CCDC58-202ENST00000460810 C20orf204Q6ZNR8 217 aa7.54□□□□□ -1.2
CCDC58-202ENST00000460810 PLEKHM2Q8IWE5 1019 aa7.54□□□□□ -1.2
CCDC58-202ENST00000460810 DEPDC4Q8N2C3 294 aa7.54□□□□□ -1.2
CCDC58-202ENST00000460810 KCNH4Q9UQ05 1017 aa7.54□□□□□ -1.2
CCDC58-202ENST00000460810 DYRK3O43781 588 aa7.53□□□□□ -1.2
CCDC58-202ENST00000460810 CCDC102BQ68D86 513 aa7.53□□□□□ -1.2
CCDC58-202ENST00000460810 TPCN2Q8NHX9 752 aa7.53□□□□□ -1.2
CCDC58-202ENST00000460810 CEP63Q96MT8 703 aa7.53□□□□□ -1.2
CCDC58-202ENST00000460810 EFCC1Q9HA90 598 aa7.53□□□□□ -1.2
CCDC58-202ENST00000460810 SFI1A8K8P3 1242 aa7.52□□□□□ -1.21
CCDC58-202ENST00000460810 C9orf172C9J069 976 aa7.52□□□□□ -1.21
CCDC58-202ENST00000460810 FAM229AH3BQW9 127 aa7.52□□□□□ -1.21
CCDC58-202ENST00000460810 C8orf86Q6ZUL3 223 aa7.52□□□□□ -1.21
CCDC58-202ENST00000460810 LILRB5O75023 590 aa7.51□□□□□ -1.21
CCDC58-202ENST00000460810 GRIK4Q16099 956 aa7.51□□□□□ -1.21
CCDC58-202ENST00000460810 TRAPPC3LQ5T215 181 aa7.51□□□□□ -1.21
CCDC58-202ENST00000460810 LARGE2Q8N3Y3 721 aa7.51□□□□□ -1.21
CCDC58-202ENST00000460810 PHACTR1Q9C0D0 580 aa7.51□□□□□ -1.21
CCDC58-202ENST00000460810 TSPAN10Q9H1Z9 355 aaPredicted RBP7.51□□□□□ -1.21
CCDC58-202ENST00000460810 HCN4Q9Y3Q4 1203 aa7.51□□□□□ -1.21
CCDC58-202ENST00000460810 CLDN10P78369 228 aa7.5□□□□□ -1.21
CCDC58-202ENST00000460810 TYRO3Q06418 890 aa7.5□□□□□ -1.21
CCDC58-202ENST00000460810 HIF1AQ16665 826 aa7.5□□□□□ -1.21
CCDC58-202ENST00000460810 FOXD4L6Q3SYB3 417 aaPredicted RBP7.5□□□□□ -1.21
CCDC58-202ENST00000460810 FOXD4L3Q6VB84 417 aaPredicted RBP7.5□□□□□ -1.21
CCDC58-202ENST00000460810 RAB44Q7Z6P3 723 aaPredicted RBP7.5□□□□□ -1.21
CCDC58-202ENST00000460810 HSH2DQ96JZ2 352 aa7.5□□□□□ -1.21
CCDC58-202ENST00000460810 SUSD3Q96L08 255 aa7.5□□□□□ -1.21
CCDC58-202ENST00000460810 KIAA1024Q9UPX6 916 aa7.5□□□□□ -1.21
CCDC58-202ENST00000460810 SCO2A0A1W2PP80 73 aa7.49□□□□□ -1.21
CCDC58-202ENST00000460810 USP17L3A6NCW0 530 aa7.49□□□□□ -1.21
CCDC58-202ENST00000460810 USP17L4A6NCW7 530 aa7.49□□□□□ -1.21
CCDC58-202ENST00000460810 PALM3A6NDB9 673 aaPredicted RBP7.49□□□□□ -1.21
CCDC58-202ENST00000460810 SUPT5HO00267 1087 aaKnown RBP7.49□□□□□ -1.21
CCDC58-202ENST00000460810 H2AFB1P0C5Y9 115 aa7.49□□□□□ -1.21
CCDC58-202ENST00000460810 H2AFB2P0C5Z0 115 aa7.49□□□□□ -1.21
CCDC58-202ENST00000460810 ELNP15502 786 aa7.49□□□□□ -1.21
CCDC58-202ENST00000460810 USP17L2Q6R6M4 530 aa7.49□□□□□ -1.21
CCDC58-202ENST00000460810 USP17L1Q7RTZ2 530 aa7.49□□□□□ -1.21
CCDC58-202ENST00000460810 STAG2Q8N3U4 1231 aa7.49□□□□□ -1.21
CCDC58-202ENST00000460810 RAD21O60216 631 aa7.48□□□□□ -1.21
CCDC58-202ENST00000460810 NRG1Q02297 640 aaPredicted RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms