RNA–Protein interactions for RNA: ENST00000460790.1

CSDC2-202, Transcript of cold shock domain containing C2, humanhuman

TSL 3

Gene CSDC2, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-202ENST00000460790 ATP10DQ9P241 1426 aa13.76□□□□□ -0.21
CSDC2-202ENST00000460790 CNTNAP4Q9C0A0 1308 aa13.76□□□□□ -0.21
CSDC2-202ENST00000460790 ALDH1L1O75891 902 aa13.76□□□□□ -0.21
CSDC2-202ENST00000460790 SLC27A3Q5K4L6 730 aa13.76□□□□□ -0.21
CSDC2-202ENST00000460790 APBA3O96018 575 aa13.75□□□□□ -0.21
CSDC2-202ENST00000460790 HMGB2P26583 209 aaKnown RBP13.75□□□□□ -0.21
CSDC2-202ENST00000460790 LINS1Q8NG48 757 aa13.75□□□□□ -0.21
CSDC2-202ENST00000460790 CCDC136Q96JN2 1154 aa13.75□□□□□ -0.21
CSDC2-202ENST00000460790 LRRC4BQ9NT99 713 aa13.75□□□□□ -0.21
CSDC2-202ENST00000460790 NUP188Q5SRE5 1749 aa13.75□□□□□ -0.21
CSDC2-202ENST00000460790 NUP98P52948 1817 aa13.74□□□□□ -0.21
CSDC2-202ENST00000460790 NEXNQ0ZGT2 675 aa13.74□□□□□ -0.21
CSDC2-202ENST00000460790 B4GALNT3Q6L9W6 998 aa13.74□□□□□ -0.21
CSDC2-202ENST00000460790 NPM2Q86SE8 214 aaKnown RBP13.74□□□□□ -0.21
CSDC2-202ENST00000460790 PROM2Q8N271 834 aa13.74□□□□□ -0.21
CSDC2-202ENST00000460790 USP44Q9H0E7 712 aa13.74□□□□□ -0.21
CSDC2-202ENST00000460790 ZNF330Q9Y3S2 320 aaPredicted RBP13.74□□□□□ -0.21
CSDC2-202ENST00000460790 PCDHB15Q9Y5E8 787 aa13.74□□□□□ -0.21
CSDC2-202ENST00000460790 TNS1Q9HBL0 1735 aaKnown RBP13.73□□□□□ -0.21
CSDC2-202ENST00000460790 IBTKQ9P2D0 1353 aaPredicted RBP13.73□□□□□ -0.21
CSDC2-202ENST00000460790 MAP3K15Q6ZN16 1313 aa13.73□□□□□ -0.21
CSDC2-202ENST00000460790 ERVV-1B6SEH8 477 aa13.73□□□□□ -0.21
CSDC2-202ENST00000460790 RPS6KA4O75676 772 aa13.73□□□□□ -0.21
CSDC2-202ENST00000460790 IGKV5-2P06315 115 aa13.73□□□□□ -0.21
CSDC2-202ENST00000460790 TXNRD1Q16881 649 aa13.73□□□□□ -0.21
CSDC2-202ENST00000460790 KIF6Q6ZMV9 814 aa13.73□□□□□ -0.21
CSDC2-202ENST00000460790 MEIS3Q99687 375 aa13.73□□□□□ -0.21
CSDC2-202ENST00000460790 AFDNP55196 1824 aaKnown RBP13.73□□□□□ -0.21
CSDC2-202ENST00000460790 A0A087WZG4 1122 aa13.72□□□□□ -0.21
CSDC2-202ENST00000460790 GNAI3P08754 354 aa13.72□□□□□ -0.21
CSDC2-202ENST00000460790 CWF19L2Q2TBE0 894 aaKnown RBP13.72□□□□□ -0.21
CSDC2-202ENST00000460790 DZIP3Q86Y13 1208 aaKnown RBP13.72□□□□□ -0.21
CSDC2-202ENST00000460790 MYD88Q99836 296 aa13.72□□□□□ -0.21
CSDC2-202ENST00000460790 ZBTB3Q9H5J0 574 aa13.72□□□□□ -0.21
CSDC2-202ENST00000460790 TBC1D2BQ9UPU7 963 aa13.72□□□□□ -0.21
CSDC2-202ENST00000460790 C4BP0C0L5 1744 aa13.72□□□□□ -0.21
CSDC2-202ENST00000460790 NEURL1BA8MQ27 555 aa13.71□□□□□ -0.21
CSDC2-202ENST00000460790 TCIRG1Q13488 830 aa13.71□□□□□ -0.21
CSDC2-202ENST00000460790 GIGYF2Q6Y7W6 1299 aaKnown RBP13.71□□□□□ -0.21
CSDC2-202ENST00000460790 ARXQ96QS3 562 aa13.71□□□□□ -0.21
CSDC2-202ENST00000460790 RGPD3A6NKT7 1758 aaPredicted RBP13.71□□□□□ -0.22
CSDC2-202ENST00000460790 RGPD4Q7Z3J3 1758 aa13.71□□□□□ -0.22
CSDC2-202ENST00000460790 TRIM28Q13263 835 aaKnown RBP13.7□□□□□ -0.22
CSDC2-202ENST00000460790 GCKRQ14397 625 aa13.7□□□□□ -0.22
CSDC2-202ENST00000460790 HLFQ16534 295 aa13.7□□□□□ -0.22
CSDC2-202ENST00000460790 ISCA1Q9BUE6 129 aa13.7□□□□□ -0.22
CSDC2-202ENST00000460790 C9orf78Q9NZ63 289 aaPredicted RBP13.7□□□□□ -0.22
CSDC2-202ENST00000460790 RTCBQ9Y3I0 505 aaKnown RBP13.7□□□□□ -0.22
CSDC2-202ENST00000460790 COL15A1P39059 1388 aa13.7□□□□□ -0.22
CSDC2-202ENST00000460790 UTYO14607 1347 aa13.69□□□□□ -0.22
CSDC2-202ENST00000460790 ATP5J2-PTCD1G3V325 749 aa13.69□□□□□ -0.22
CSDC2-202ENST00000460790 GRM8O00222 908 aa13.69□□□□□ -0.22
CSDC2-202ENST00000460790 GNPATO15228 680 aa13.69□□□□□ -0.22
CSDC2-202ENST00000460790 CAMTA2O94983 1202 aa13.69□□□□□ -0.22
CSDC2-202ENST00000460790 IGHDP01880 384 aa13.69□□□□□ -0.22
CSDC2-202ENST00000460790 GNAI2P04899 355 aa13.69□□□□□ -0.22
CSDC2-202ENST00000460790 HSP90AB3PQ58FF7 597 aa13.69□□□□□ -0.22
CSDC2-202ENST00000460790 CCDC191Q8NCU4 936 aa13.69□□□□□ -0.22
CSDC2-202ENST00000460790 C1orf115Q9H7X2 142 aa13.69□□□□□ -0.22
CSDC2-202ENST00000460790 EP400Q96L91 3159 aa13.69□□□□□ -0.22
CSDC2-202ENST00000460790 UBR3Q6ZT12 1888 aa13.69□□□□□ -0.22
CSDC2-202ENST00000460790 ANKRD36CQ5JPF3 1778 aa13.68□□□□□ -0.22
CSDC2-202ENST00000460790 RGL2O15211 777 aa13.68□□□□□ -0.22
CSDC2-202ENST00000460790 NBPF7P0C2Y1 421 aaPredicted RBP13.68□□□□□ -0.22
CSDC2-202ENST00000460790 UBTFL1P0CB47 393 aaPredicted RBP13.68□□□□□ -0.22
CSDC2-202ENST00000460790 HDAC1Q13547 482 aaPredicted RBP13.68□□□□□ -0.22
CSDC2-202ENST00000460790 RPAP2Q8IXW5 612 aaPredicted RBP13.68□□□□□ -0.22
CSDC2-202ENST00000460790 AK7Q96M32 723 aa13.68□□□□□ -0.22
CSDC2-202ENST00000460790 CAMKK2Q96RR4 588 aa13.68□□□□□ -0.22
CSDC2-202ENST00000460790 RWDD1Q9H446 243 aaPredicted RBP13.68□□□□□ -0.22
CSDC2-202ENST00000460790 HDAC5Q9UQL6 1122 aa13.68□□□□□ -0.22
CSDC2-202ENST00000460790 TRAPPC3LQ5T215 181 aa13.67□□□□□ -0.22
CSDC2-202ENST00000460790 CLEC4GQ6UXB4 293 aa13.67□□□□□ -0.22
CSDC2-202ENST00000460790 ZNF34Q8IZ26 560 aa13.67□□□□□ -0.22
CSDC2-202ENST00000460790 ARHGEF1Q92888 912 aaKnown RBP13.67□□□□□ -0.22
CSDC2-202ENST00000460790 CWC25Q9NXE8 425 aaPredicted RBP13.67□□□□□ -0.22
CSDC2-202ENST00000460790 KDM2BQ8NHM5 1336 aa13.66□□□□□ -0.22
CSDC2-202ENST00000460790 BCORQ6W2J9 1755 aa13.66□□□□□ -0.22
CSDC2-202ENST00000460790 H7C1W4 665 aa13.66□□□□□ -0.22
CSDC2-202ENST00000460790 ADRA2BP18089 450 aa13.66□□□□□ -0.22
CSDC2-202ENST00000460790 SF3B2Q13435 895 aaKnown RBP13.66□□□□□ -0.22
CSDC2-202ENST00000460790 CEP85Q6P2H3 762 aa13.66□□□□□ -0.22
CSDC2-202ENST00000460790 SMIM5Q71RC9 77 aa13.66□□□□□ -0.22
CSDC2-202ENST00000460790 AMIGO3Q86WK7 504 aa13.66□□□□□ -0.22
CSDC2-202ENST00000460790 SIRT2Q8IXJ6 389 aa13.66□□□□□ -0.22
CSDC2-202ENST00000460790 ANKRD44Q8N8A2 993 aa13.66□□□□□ -0.22
CSDC2-202ENST00000460790 NARFQ9UHQ1 456 aa13.66□□□□□ -0.22
CSDC2-202ENST00000460790 LRRFIP2Q9Y608 721 aaKnown RBP13.66□□□□□ -0.22
CSDC2-202ENST00000460790 ATP8B2P98198 1209 aa13.65□□□□□ -0.22
CSDC2-202ENST00000460790 EN1Q05925 392 aaPredicted RBP13.65□□□□□ -0.22
CSDC2-202ENST00000460790 EZH2Q15910 746 aaKnown RBP13.65□□□□□ -0.22
CSDC2-202ENST00000460790 CENPQQ7L2Z9 268 aaPredicted RBP13.65□□□□□ -0.22
CSDC2-202ENST00000460790 CCDC125Q86Z20 511 aa13.65□□□□□ -0.22
CSDC2-202ENST00000460790 AKT1S1Q96B36 256 aa13.65□□□□□ -0.22
CSDC2-202ENST00000460790 ZPR1O75312 459 aa13.64□□□□□ -0.23
CSDC2-202ENST00000460790 SSFA2P28290 1259 aa13.64□□□□□ -0.23
CSDC2-202ENST00000460790 BAG6P46379 1132 aa13.64□□□□□ -0.23
CSDC2-202ENST00000460790 CASP7P55210 303 aa13.64□□□□□ -0.23
CSDC2-202ENST00000460790 NLRP10Q86W26 655 aa13.64□□□□□ -0.23
CSDC2-202ENST00000460790 ZNF652Q9Y2D9 606 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms