RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 HEG1Q9ULI3 1381 aa18.28■□□□□ 0.52
SCAMP4-206ENST00000460767 SRGNP10124 158 aa18.27■□□□□ 0.52
SCAMP4-206ENST00000460767 CNGB1Q14028 1251 aaPredicted RBP18.27■□□□□ 0.52
SCAMP4-206ENST00000460767 MTHFSDQ2M296 383 aaKnown RBP18.26■□□□□ 0.51
SCAMP4-206ENST00000460767 PRPF40BQ6NWY9 871 aaKnown RBP18.26■□□□□ 0.51
SCAMP4-206ENST00000460767 BICDL1Q6ZP65 573 aa18.26■□□□□ 0.51
SCAMP4-206ENST00000460767 TTC5Q8N0Z6 440 aa18.26■□□□□ 0.51
SCAMP4-206ENST00000460767 TAF1DQ9H5J8 278 aaPredicted RBP18.26■□□□□ 0.51
SCAMP4-206ENST00000460767 WBP1LQ9NX94 342 aa18.26■□□□□ 0.51
SCAMP4-206ENST00000460767 ZNF316A6NFI3 1004 aaPredicted RBP18.25■□□□□ 0.51
SCAMP4-206ENST00000460767 TMEM88BA6NKF7 163 aa18.25■□□□□ 0.51
SCAMP4-206ENST00000460767 ITGBL1O95965 494 aaPredicted RBP18.25■□□□□ 0.51
SCAMP4-206ENST00000460767 HMOX1P09601 288 aa18.25■□□□□ 0.51
SCAMP4-206ENST00000460767 CNBD1Q8NA66 436 aa18.25■□□□□ 0.51
SCAMP4-206ENST00000460767 AIDAQ96BJ3 306 aa18.25■□□□□ 0.51
SCAMP4-206ENST00000460767 MASTLQ96GX5 879 aa18.25■□□□□ 0.51
SCAMP4-206ENST00000460767 RSPH6AQ9H0K4 717 aa18.25■□□□□ 0.51
SCAMP4-206ENST00000460767 C7orf43Q8WVR3 580 aa18.24■□□□□ 0.51
SCAMP4-206ENST00000460767 CFAP53Q96M91 514 aa18.24■□□□□ 0.51
SCAMP4-206ENST00000460767 RASSF10A6NK89 507 aa18.23■□□□□ 0.51
SCAMP4-206ENST00000460767 CAMTA2O94983 1202 aa18.23■□□□□ 0.51
SCAMP4-206ENST00000460767 VEGFBP49765 207 aa18.23■□□□□ 0.51
SCAMP4-206ENST00000460767 ST5P78524 1137 aa18.23■□□□□ 0.51
SCAMP4-206ENST00000460767 ZNF790Q6PG37 636 aa18.23■□□□□ 0.51
SCAMP4-206ENST00000460767 ZNF496Q96IT1 587 aaPredicted RBP18.23■□□□□ 0.51
SCAMP4-206ENST00000460767 PRKRIP1Q9H875 184 aaPredicted RBP18.23■□□□□ 0.51
SCAMP4-206ENST00000460767 RGL2O15211 777 aa18.22■□□□□ 0.51
SCAMP4-206ENST00000460767 CCDC93Q567U6 631 aa18.22■□□□□ 0.51
SCAMP4-206ENST00000460767 SETDB2Q96T68 719 aa18.22■□□□□ 0.51
SCAMP4-206ENST00000460767 KLRG2A4D1S0 409 aaPredicted RBP18.21■□□□□ 0.51
SCAMP4-206ENST00000460767 MYBBP1AQ9BQG0 1328 aaKnown RBP18.21■□□□□ 0.51
SCAMP4-206ENST00000460767 CEMIPQ8WUJ3 1361 aa18.2■□□□□ 0.5
SCAMP4-206ENST00000460767 FKBP4Q02790 459 aaKnown RBP eCLIP18.2■□□□□ 0.57e-6■■■■□ 25.4
SCAMP4-206ENST00000460767 CLEC4GQ6UXB4 293 aa18.2■□□□□ 0.5
SCAMP4-206ENST00000460767 PNMA8AQ86V59 439 aaPredicted RBP18.2■□□□□ 0.5
SCAMP4-206ENST00000460767 ZNF219Q9P2Y4 722 aaPredicted RBP18.2■□□□□ 0.5
SCAMP4-206ENST00000460767 HACL1Q9UJ83 578 aa18.2■□□□□ 0.5
SCAMP4-206ENST00000460767 TBC1D2BQ9UPU7 963 aa18.2■□□□□ 0.5
SCAMP4-206ENST00000460767 SNED1Q8TER0 1413 aa18.2■□□□□ 0.5
SCAMP4-206ENST00000460767 U2SURPO15042 1029 aaKnown RBP18.19■□□□□ 0.5
SCAMP4-206ENST00000460767 PHACTR3Q96KR7 559 aa18.19■□□□□ 0.5
SCAMP4-206ENST00000460767 HSPA8P11142 646 aaKnown RBP18.18■□□□□ 0.5
SCAMP4-206ENST00000460767 NPR1P16066 1061 aa18.18■□□□□ 0.5
SCAMP4-206ENST00000460767 LBX1P52954 281 aa18.18■□□□□ 0.5
SCAMP4-206ENST00000460767 MAP2K1Q02750 393 aaPredicted RBP18.18■□□□□ 0.5
SCAMP4-206ENST00000460767 FMNL2Q96PY5 1086 aa18.18■□□□□ 0.5
SCAMP4-206ENST00000460767 NUDCQ9Y266 331 aa18.18■□□□□ 0.5
SCAMP4-206ENST00000460767 ZNF541Q9H0D2 1346 aa18.18■□□□□ 0.5
SCAMP4-206ENST00000460767 EPHX2P34913 555 aa18.17■□□□□ 0.5
SCAMP4-206ENST00000460767 TEFQ10587 303 aa18.17■□□□□ 0.5
SCAMP4-206ENST00000460767 CCDC24Q8N4L8 307 aa18.17■□□□□ 0.5
SCAMP4-206ENST00000460767 GAS2L2Q8NHY3 880 aa18.17■□□□□ 0.5
SCAMP4-206ENST00000460767 ABHD8Q96I13 439 aa18.17■□□□□ 0.5
SCAMP4-206ENST00000460767 PLEKHF1Q96S99 279 aa18.17■□□□□ 0.5
SCAMP4-206ENST00000460767 GNAT3A8MTJ3 354 aa18.16■□□□□ 0.5
SCAMP4-206ENST00000460767 FZD9O00144 591 aa18.16■□□□□ 0.5
SCAMP4-206ENST00000460767 PRKAR2BP31323 418 aa18.16■□□□□ 0.5
SCAMP4-206ENST00000460767 DEFB115Q30KQ5 88 aa18.16■□□□□ 0.5
SCAMP4-206ENST00000460767 NPM2Q86SE8 214 aaKnown RBP18.16■□□□□ 0.5
SCAMP4-206ENST00000460767 DZIP3Q86Y13 1208 aaKnown RBP18.16■□□□□ 0.5
SCAMP4-206ENST00000460767 RTKN2Q8IZC4 609 aa18.16■□□□□ 0.5
SCAMP4-206ENST00000460767 IL17REQ8NFR9 667 aa18.16■□□□□ 0.5
SCAMP4-206ENST00000460767 NPHP1O15259 732 aa18.15■□□□□ 0.5
SCAMP4-206ENST00000460767 U2AF1L5P0DN76 240 aaPredicted RBP18.15■□□□□ 0.5
SCAMP4-206ENST00000460767 U2AF1Q01081 240 aaKnown RBP eCLIP18.15■□□□□ 0.5
SCAMP4-206ENST00000460767 DLG5Q8TDM6 1919 aa18.14■□□□□ 0.49
SCAMP4-206ENST00000460767 A1BGP04217 495 aa18.14■□□□□ 0.49
SCAMP4-206ENST00000460767 GPC2Q8N158 579 aa18.14■□□□□ 0.49
SCAMP4-206ENST00000460767 ZNF652Q9Y2D9 606 aa18.14■□□□□ 0.49
SCAMP4-206ENST00000460767 ZNF330Q9Y3S2 320 aaPredicted RBP18.14■□□□□ 0.49
SCAMP4-206ENST00000460767 WDR33Q9C0J8 1336 aaKnown RBP18.14■□□□□ 0.49
SCAMP4-206ENST00000460767 LTBP1Q14766 1721 aa18.13■□□□□ 0.49
SCAMP4-206ENST00000460767 RGS19P49795 217 aa18.13■□□□□ 0.49
SCAMP4-206ENST00000460767 EAPPQ56P03 285 aaPredicted RBP18.13■□□□□ 0.49
SCAMP4-206ENST00000460767 NBPF5PQ86XG9 351 aaPredicted RBP18.13■□□□□ 0.49
SCAMP4-206ENST00000460767 CNTROBQ8N137 903 aa18.13■□□□□ 0.49
SCAMP4-206ENST00000460767 IARSP41252 1262 aaKnown RBP18.12■□□□□ 0.49
SCAMP4-206ENST00000460767 PSMD1Q99460 953 aa18.12■□□□□ 0.49
SCAMP4-206ENST00000460767 ZNF277Q9NRM2 450 aaPredicted RBP18.12■□□□□ 0.49
SCAMP4-206ENST00000460767 RNF123Q5XPI4 1314 aa18.12■□□□□ 0.49
SCAMP4-206ENST00000460767 TRPM7Q96QT4 1865 aa18.12■□□□□ 0.49
SCAMP4-206ENST00000460767 FAM161AQ3B820 660 aa18.11■□□□□ 0.49
SCAMP4-206ENST00000460767 RIC1Q4ADV7 1423 aa18.11■□□□□ 0.49
SCAMP4-206ENST00000460767 LAMB4A4D0S4 1761 aa18.11■□□□□ 0.49
SCAMP4-206ENST00000460767 ALDH1B1P30837 517 aa18.1■□□□□ 0.49
SCAMP4-206ENST00000460767 MAP1SQ66K74 1059 aaPredicted RBP18.1■□□□□ 0.49
SCAMP4-206ENST00000460767 TPTE2Q6XPS3 522 aa18.1■□□□□ 0.49
SCAMP4-206ENST00000460767 DDX21Q9NR30 783 aaKnown RBP eCLIP18.1■□□□□ 0.49
SCAMP4-206ENST00000460767 PCDH10Q9P2E7 1040 aa18.1■□□□□ 0.49
SCAMP4-206ENST00000460767 CLEC11AQ9Y240 323 aa18.1■□□□□ 0.49
SCAMP4-206ENST00000460767 CRY2Q49AN0 593 aa18.09■□□□□ 0.49
SCAMP4-206ENST00000460767 CC2D2BQ6DHV5 1058 aa18.09■□□□□ 0.49
SCAMP4-206ENST00000460767 COL4A5P29400 1685 aa18.09■□□□□ 0.49
SCAMP4-206ENST00000460767 ECE1P42892 770 aa18.08■□□□□ 0.48
SCAMP4-206ENST00000460767 GRIPAP1Q4V328 841 aa18.08■□□□□ 0.48
SCAMP4-206ENST00000460767 ABT1Q9ULW3 272 aaKnown RBP18.08■□□□□ 0.48
SCAMP4-206ENST00000460767 USP16Q9Y5T5 823 aa18.08■□□□□ 0.48
SCAMP4-206ENST00000460767 BTBD11A6QL63 1104 aa18.07■□□□□ 0.48
SCAMP4-206ENST00000460767 HTATSF1O43719 755 aaKnown RBP18.07■□□□□ 0.48
SCAMP4-206ENST00000460767 IBTKQ9P2D0 1353 aaPredicted RBP18.06■□□□□ 0.48
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