RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 PNMA6EA0A0J9YXQ4 647 aa14.22□□□□□ -0.13
CPNE6-202ENST00000460657 TPM1P09493 284 aa14.22□□□□□ -0.13
CPNE6-202ENST00000460657 JMYQ8N9B5 988 aa14.22□□□□□ -0.13
CPNE6-202ENST00000460657 SMC2O95347 1197 aa14.22□□□□□ -0.13
CPNE6-202ENST00000460657 F13A1P00488 732 aa14.22□□□□□ -0.13
CPNE6-202ENST00000460657 AK2P54819 239 aa14.22□□□□□ -0.13
CPNE6-202ENST00000460657 CEP57L1Q8IYX8 460 aa14.22□□□□□ -0.13
CPNE6-202ENST00000460657 FMNL2Q96PY5 1086 aa14.22□□□□□ -0.13
CPNE6-202ENST00000460657 ZKSCAN5Q9Y2L8 839 aa14.22□□□□□ -0.13
CPNE6-202ENST00000460657 TMEM2Q9UHN6 1383 aa14.21□□□□□ -0.13
CPNE6-202ENST00000460657 A0A087WZG4 1122 aa14.21□□□□□ -0.13
CPNE6-202ENST00000460657 FSD2A1L4K1 749 aa14.21□□□□□ -0.13
CPNE6-202ENST00000460657 LINS1Q8NG48 757 aa14.21□□□□□ -0.13
CPNE6-202ENST00000460657 PTCH1Q13635 1447 aa14.21□□□□□ -0.13
CPNE6-202ENST00000460657 METP08581 1390 aa14.21□□□□□ -0.13
CPNE6-202ENST00000460657 CDK12Q9NYV4 1490 aaPredicted RBP14.21□□□□□ -0.14
CPNE6-202ENST00000460657 SIRT2Q8IXJ6 389 aa14.21□□□□□ -0.14
CPNE6-202ENST00000460657 CNNM1Q9NRU3 951 aa14.21□□□□□ -0.14
CPNE6-202ENST00000460657 LMBRD1Q9NUN5 540 aa14.21□□□□□ -0.14
CPNE6-202ENST00000460657 ABCA9Q8IUA7 1624 aa14.2□□□□□ -0.14
CPNE6-202ENST00000460657 KIAA1210Q9ULL0 1709 aa14.2□□□□□ -0.14
CPNE6-202ENST00000460657 HOXB7P09629 217 aa14.2□□□□□ -0.14
CPNE6-202ENST00000460657 NECAB1Q8N987 351 aa14.2□□□□□ -0.14
CPNE6-202ENST00000460657 SART3Q15020 963 aaKnown RBP14.2□□□□□ -0.14
CPNE6-202ENST00000460657 ZSCAN25Q6NSZ9 544 aa14.2□□□□□ -0.14
CPNE6-202ENST00000460657 IP6K1Q92551 441 aa14.2□□□□□ -0.14
CPNE6-202ENST00000460657 PRDM11Q9NQV5 511 aa14.2□□□□□ -0.14
CPNE6-202ENST00000460657 RBSNQ9H1K0 784 aa14.2□□□□□ -0.14
CPNE6-202ENST00000460657 TFIP11Q9UBB9 837 aaKnown RBP14.2□□□□□ -0.14
CPNE6-202ENST00000460657 PA2G4Q9UQ80 394 aaKnown RBP14.2□□□□□ -0.14
CPNE6-202ENST00000460657 DHX8Q14562 1220 aaKnown RBP14.19□□□□□ -0.14
CPNE6-202ENST00000460657 INO80Q9ULG1 1556 aaPredicted RBP14.19□□□□□ -0.14
CPNE6-202ENST00000460657 IFIT1P09914 478 aaKnown RBP14.19□□□□□ -0.14
CPNE6-202ENST00000460657 GIMAP6Q6P9H5 292 aa14.19□□□□□ -0.14
CPNE6-202ENST00000460657 KRT28Q7Z3Y7 464 aa14.19□□□□□ -0.14
CPNE6-202ENST00000460657 CKAP2LQ8IYA6 745 aa14.19□□□□□ -0.14
CPNE6-202ENST00000460657 IFNL2Q8IZJ0 200 aa14.19□□□□□ -0.14
CPNE6-202ENST00000460657 NEK1Q96PY6 1258 aa14.19□□□□□ -0.14
CPNE6-202ENST00000460657 IMMTQ16891 758 aaKnown RBP14.19□□□□□ -0.14
CPNE6-202ENST00000460657 UBE3BQ7Z3V4 1068 aa14.19□□□□□ -0.14
CPNE6-202ENST00000460657 CCDC112Q8NEF3 446 aa14.19□□□□□ -0.14
CPNE6-202ENST00000460657 PDCL3Q9H2J4 239 aa14.19□□□□□ -0.14
CPNE6-202ENST00000460657 EPB41L2O43491 1005 aaKnown RBP14.18□□□□□ -0.14
CPNE6-202ENST00000460657 KCNA6P17658 529 aa14.18□□□□□ -0.14
CPNE6-202ENST00000460657 VPS53Q5VIR6 699 aa14.18□□□□□ -0.14
CPNE6-202ENST00000460657 ANKRD13DQ6ZTN6 518 aa14.18□□□□□ -0.14
CPNE6-202ENST00000460657 MED14O60244 1454 aa14.18□□□□□ -0.14
CPNE6-202ENST00000460657 PNPLA6Q8IY17 1366 aa14.18□□□□□ -0.14
CPNE6-202ENST00000460657 CD2BP2O95400 341 aaKnown RBP14.18□□□□□ -0.14
CPNE6-202ENST00000460657 VPS37DQ86XT2 251 aa14.18□□□□□ -0.14
CPNE6-202ENST00000460657 CCAR2Q8N163 923 aaKnown RBP14.18□□□□□ -0.14
CPNE6-202ENST00000460657 LRRC59Q96AG4 307 aaKnown RBP14.18□□□□□ -0.14
CPNE6-202ENST00000460657 STRN4Q9NRL3 753 aa14.18□□□□□ -0.14
CPNE6-202ENST00000460657 SGSM2O43147 1006 aa14.18□□□□□ -0.14
CPNE6-202ENST00000460657 SNRPA1P09661 255 aaKnown RBP14.17□□□□□ -0.14
CPNE6-202ENST00000460657 DNM1Q05193 864 aaKnown RBP14.17□□□□□ -0.14
CPNE6-202ENST00000460657 MNS1Q8NEH6 495 aa14.17□□□□□ -0.14
CPNE6-202ENST00000460657 AKAP2Q9Y2D5 859 aa14.17□□□□□ -0.14
CPNE6-202ENST00000460657 PPRC1Q5VV67 1664 aaKnown RBP14.17□□□□□ -0.14
CPNE6-202ENST00000460657 TULP4Q9NRJ4 1543 aa14.17□□□□□ -0.14
CPNE6-202ENST00000460657 CTAGE5O15320 804 aa14.17□□□□□ -0.14
CPNE6-202ENST00000460657 OFD1O75665 1012 aa14.17□□□□□ -0.14
CPNE6-202ENST00000460657 ZNF771Q7L3S4 317 aaPredicted RBP14.17□□□□□ -0.14
CPNE6-202ENST00000460657 ANKRD20A12PQ8NF67 263 aa14.17□□□□□ -0.14
CPNE6-202ENST00000460657 CDKL5O76039 1030 aa14.17□□□□□ -0.14
CPNE6-202ENST00000460657 XBP1P17861 261 aa14.17□□□□□ -0.14
CPNE6-202ENST00000460657 NMIQ13287 307 aaPredicted RBP14.17□□□□□ -0.14
CPNE6-202ENST00000460657 TSR1Q2NL82 804 aaKnown RBP14.17□□□□□ -0.14
CPNE6-202ENST00000460657 CWF19L2Q2TBE0 894 aaKnown RBP14.17□□□□□ -0.14
CPNE6-202ENST00000460657 FILIP1Q7Z7B0 1213 aa14.17□□□□□ -0.14
CPNE6-202ENST00000460657 XAGE3Q8WTP9 111 aa14.17□□□□□ -0.14
CPNE6-202ENST00000460657 PES1O00541 588 aaKnown RBP14.16□□□□□ -0.14
CPNE6-202ENST00000460657 KDM4AO75164 1064 aa14.16□□□□□ -0.14
CPNE6-202ENST00000460657 SYT1P21579 422 aa14.16□□□□□ -0.14
CPNE6-202ENST00000460657 COPS6Q7L5N1 327 aa14.16□□□□□ -0.14
CPNE6-202ENST00000460657 RAD50Q92878 1312 aa14.16□□□□□ -0.14
CPNE6-202ENST00000460657 CCP110O43303 1012 aa14.16□□□□□ -0.14
CPNE6-202ENST00000460657 TCEANC2Q96MN5 208 aa14.16□□□□□ -0.14
CPNE6-202ENST00000460657 OSBPL3Q9H4L5 887 aa14.16□□□□□ -0.14
CPNE6-202ENST00000460657 ANO10Q9NW15 660 aa14.16□□□□□ -0.14
CPNE6-202ENST00000460657 ARGLU1Q9NWB6 273 aaPredicted RBP14.16□□□□□ -0.14
CPNE6-202ENST00000460657 ATP5J2-PTCD1G3V325 749 aa14.16□□□□□ -0.14
CPNE6-202ENST00000460657 PTCD1O75127 700 aaKnown RBP14.16□□□□□ -0.14
CPNE6-202ENST00000460657 IQSEC2Q5JU85 1478 aa14.15□□□□□ -0.14
CPNE6-202ENST00000460657 SSH2Q76I76 1423 aa14.15□□□□□ -0.14
CPNE6-202ENST00000460657 BRD1O95696 1058 aa14.15□□□□□ -0.14
CPNE6-202ENST00000460657 CREB3L3Q68CJ9 461 aa14.15□□□□□ -0.14
CPNE6-202ENST00000460657 USP44Q9H0E7 712 aa14.15□□□□□ -0.14
CPNE6-202ENST00000460657 SNX14Q9Y5W7 946 aa14.15□□□□□ -0.14
CPNE6-202ENST00000460657 RNMTO43148 476 aaKnown RBP14.15□□□□□ -0.14
CPNE6-202ENST00000460657 HSPA4P34932 840 aa14.15□□□□□ -0.14
CPNE6-202ENST00000460657 GOLIM4O00461 696 aa14.15□□□□□ -0.14
CPNE6-202ENST00000460657 GAS2L3Q86XJ1 694 aa14.15□□□□□ -0.14
CPNE6-202ENST00000460657 SSH3Q8TE77 659 aa14.15□□□□□ -0.14
CPNE6-202ENST00000460657 BCL11BQ9C0K0 894 aaPredicted RBP14.15□□□□□ -0.14
CPNE6-202ENST00000460657 ZSCAN16Q9H4T2 348 aaPredicted RBP14.15□□□□□ -0.14
CPNE6-202ENST00000460657 CCDC171Q6TFL3 1326 aa14.15□□□□□ -0.15
CPNE6-202ENST00000460657 DYNC1I1O14576 645 aa14.14□□□□□ -0.15
CPNE6-202ENST00000460657 CAVIN2O95810 425 aa14.14□□□□□ -0.15
CPNE6-202ENST00000460657 RUFY3Q7L099 469 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms