RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 RILPL2Q969X0 211 aa7.39□□□□□ -1.23
HLA-DQA1-205ENST00000460633 HMGB3O15347 200 aaKnown RBP7.38□□□□□ -1.23
HLA-DQA1-205ENST00000460633 POTEJP0CG39 1038 aa7.38□□□□□ -1.23
HLA-DQA1-205ENST00000460633 TXLNAP40222 546 aa7.38□□□□□ -1.23
HLA-DQA1-205ENST00000460633 TTC39AQ5SRH9 613 aa7.38□□□□□ -1.23
HLA-DQA1-205ENST00000460633 SH2D4AQ9H788 454 aa7.38□□□□□ -1.23
HLA-DQA1-205ENST00000460633 QRICH2Q9H0J4 1663 aa7.38□□□□□ -1.23
HLA-DQA1-205ENST00000460633 PRPF40AO75400 957 aaKnown RBP7.38□□□□□ -1.23
HLA-DQA1-205ENST00000460633 MYCNP04198 464 aaPredicted RBP7.38□□□□□ -1.23
HLA-DQA1-205ENST00000460633 SYCP1Q15431 976 aa7.38□□□□□ -1.23
HLA-DQA1-205ENST00000460633 MYO6Q9UM54 1294 aa7.38□□□□□ -1.23
HLA-DQA1-205ENST00000460633 C1orf167Q5SNV9 1468 aa7.38□□□□□ -1.23
HLA-DQA1-205ENST00000460633 ZNF530Q6P9A1 599 aaPredicted RBP7.38□□□□□ -1.23
HLA-DQA1-205ENST00000460633 FEZ1Q99689 392 aa7.38□□□□□ -1.23
HLA-DQA1-205ENST00000460633 ANKIB1Q9P2G1 1089 aa7.38□□□□□ -1.23
HLA-DQA1-205ENST00000460633 FLT4P35916 1363 aa7.38□□□□□ -1.23
HLA-DQA1-205ENST00000460633 PIP4K2AP48426 406 aaPredicted RBP7.38□□□□□ -1.23
HLA-DQA1-205ENST00000460633 CCDC178Q5BJE1 867 aa7.38□□□□□ -1.23
HLA-DQA1-205ENST00000460633 CCDC82Q8N4S0 544 aa7.38□□□□□ -1.23
HLA-DQA1-205ENST00000460633 RBM28Q9NW13 759 aaKnown RBP7.38□□□□□ -1.23
HLA-DQA1-205ENST00000460633 ROBO2Q9HCK4 1378 aa7.38□□□□□ -1.23
HLA-DQA1-205ENST00000460633 IFIT1P09914 478 aaKnown RBP7.38□□□□□ -1.23
HLA-DQA1-205ENST00000460633 CA8P35219 290 aa7.38□□□□□ -1.23
HLA-DQA1-205ENST00000460633 EPS15P42566 896 aa7.38□□□□□ -1.23
HLA-DQA1-205ENST00000460633 CCDC57Q2TAC2 916 aa7.38□□□□□ -1.23
HLA-DQA1-205ENST00000460633 TXLNBQ8N3L3 684 aa7.38□□□□□ -1.23
HLA-DQA1-205ENST00000460633 GOLGA6L19H0YKK7 550 aa7.37□□□□□ -1.23
HLA-DQA1-205ENST00000460633 PRDM10Q9NQV6 1147 aa7.37□□□□□ -1.23
HLA-DQA1-205ENST00000460633 IFT57Q9NWB7 429 aa7.37□□□□□ -1.23
HLA-DQA1-205ENST00000460633 CCDC150Q8NCX0 1101 aa7.37□□□□□ -1.23
HLA-DQA1-205ENST00000460633 MTIF3Q9H2K0 278 aaKnown RBP7.37□□□□□ -1.23
HLA-DQA1-205ENST00000460633 H3BQV1 296 aa7.37□□□□□ -1.23
HLA-DQA1-205ENST00000460633 FOXO3O43524 673 aa7.37□□□□□ -1.23
HLA-DQA1-205ENST00000460633 ZNF76P36508 570 aa7.37□□□□□ -1.23
HLA-DQA1-205ENST00000460633 IFFO2Q5TF58 517 aa7.37□□□□□ -1.23
HLA-DQA1-205ENST00000460633 PABPN1LA6NDY0 278 aaKnown RBP7.37□□□□□ -1.23
HLA-DQA1-205ENST00000460633 REC8O95072 547 aa7.37□□□□□ -1.23
HLA-DQA1-205ENST00000460633 MPNDQ8N594 471 aa7.37□□□□□ -1.23
HLA-DQA1-205ENST00000460633 CCDC112Q8NEF3 446 aa7.37□□□□□ -1.23
HLA-DQA1-205ENST00000460633 IPO4Q8TEX9 1081 aaKnown RBP7.37□□□□□ -1.23
HLA-DQA1-205ENST00000460633 RTCBQ9Y3I0 505 aaKnown RBP7.37□□□□□ -1.23
HLA-DQA1-205ENST00000460633 LRRC7Q96NW7 1537 aa7.37□□□□□ -1.23
HLA-DQA1-205ENST00000460633 IFT172Q9UG01 1749 aa7.37□□□□□ -1.23
HLA-DQA1-205ENST00000460633 RBM17Q96I25 401 aaKnown RBP7.36□□□□□ -1.23
HLA-DQA1-205ENST00000460633 AKAP2Q9Y2D5 859 aa7.36□□□□□ -1.23
HLA-DQA1-205ENST00000460633 CDR1P51861 262 aa7.36□□□□□ -1.23
HLA-DQA1-205ENST00000460633 C20orf194Q5TEA3 1177 aa7.36□□□□□ -1.23
HLA-DQA1-205ENST00000460633 ANKRD18AQ8IVF6 992 aa7.36□□□□□ -1.23
HLA-DQA1-205ENST00000460633 BCCIPQ9P287 314 aaKnown RBP eCLIP7.36□□□□□ -1.23
HLA-DQA1-205ENST00000460633 USP21Q9UK80 565 aa7.36□□□□□ -1.23
HLA-DQA1-205ENST00000460633 AATKQ6ZMQ8 1374 aa7.36□□□□□ -1.23
HLA-DQA1-205ENST00000460633 ATP2B2Q01814 1243 aa7.36□□□□□ -1.23
HLA-DQA1-205ENST00000460633 NFE2L2Q16236 605 aa7.36□□□□□ -1.23
HLA-DQA1-205ENST00000460633 TEX35Q5T0J7 233 aa7.36□□□□□ -1.23
HLA-DQA1-205ENST00000460633 CCAR2Q8N163 923 aaKnown RBP7.36□□□□□ -1.23
HLA-DQA1-205ENST00000460633 ZFP91Q96JP5 570 aaPredicted RBP7.36□□□□□ -1.23
HLA-DQA1-205ENST00000460633 PDCL3Q9H2J4 239 aa7.36□□□□□ -1.23
HLA-DQA1-205ENST00000460633 BECN2A8MW95 431 aa7.36□□□□□ -1.23
HLA-DQA1-205ENST00000460633 RUNDC1Q96C34 613 aa7.36□□□□□ -1.23
HLA-DQA1-205ENST00000460633 TMEM106CQ9BVX2 250 aa7.36□□□□□ -1.23
HLA-DQA1-205ENST00000460633 NOD1Q9Y239 953 aa7.36□□□□□ -1.23
HLA-DQA1-205ENST00000460633 SOS1Q07889 1333 aaPredicted RBP7.35□□□□□ -1.23
HLA-DQA1-205ENST00000460633 ZSCAN30Q86W11 494 aa7.35□□□□□ -1.23
HLA-DQA1-205ENST00000460633 TSPY26PQ9H489 355 aa7.35□□□□□ -1.23
HLA-DQA1-205ENST00000460633 IVNS1ABPQ9Y6Y0 642 aa7.35□□□□□ -1.23
HLA-DQA1-205ENST00000460633 MAST3O60307 1309 aa7.35□□□□□ -1.23
HLA-DQA1-205ENST00000460633 HOMER2Q9NSB8 354 aa7.35□□□□□ -1.23
HLA-DQA1-205ENST00000460633 FCHSD2O94868 740 aa7.35□□□□□ -1.23
HLA-DQA1-205ENST00000460633 BAG3O95817 575 aa7.35□□□□□ -1.23
HLA-DQA1-205ENST00000460633 KRT18P05783 430 aaKnown RBP7.35□□□□□ -1.23
HLA-DQA1-205ENST00000460633 HOXD10P28358 340 aa7.35□□□□□ -1.23
HLA-DQA1-205ENST00000460633 PDE3AQ14432 1141 aa7.35□□□□□ -1.23
HLA-DQA1-205ENST00000460633 INTS3Q68E01 1043 aaKnown RBP7.35□□□□□ -1.23
HLA-DQA1-205ENST00000460633 EXOC4Q96A65 974 aa7.35□□□□□ -1.23
HLA-DQA1-205ENST00000460633 SPATA31A3Q5VYP0 1347 aa7.35□□□□□ -1.23
HLA-DQA1-205ENST00000460633 C6orf229H3BNL8 230 aa7.35□□□□□ -1.23
HLA-DQA1-205ENST00000460633 GNAI3P08754 354 aa7.35□□□□□ -1.23
HLA-DQA1-205ENST00000460633 HMGN5P82970 282 aaKnown RBP7.35□□□□□ -1.23
HLA-DQA1-205ENST00000460633 MAPK8IP2Q13387 824 aaPredicted RBP7.35□□□□□ -1.23
HLA-DQA1-205ENST00000460633 USP6P35125 1406 aa7.35□□□□□ -1.23
HLA-DQA1-205ENST00000460633 USP31Q70CQ4 1352 aa7.35□□□□□ -1.23
HLA-DQA1-205ENST00000460633 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.34□□□□□ -1.23
HLA-DQA1-205ENST00000460633 FYB1O15117 783 aa7.34□□□□□ -1.23
HLA-DQA1-205ENST00000460633 IP6K1Q92551 441 aa7.34□□□□□ -1.23
HLA-DQA1-205ENST00000460633 H7C1D1 291 aa7.34□□□□□ -1.23
HLA-DQA1-205ENST00000460633 CDC45O75419 566 aa7.34□□□□□ -1.23
HLA-DQA1-205ENST00000460633 PPP2R1AP30153 589 aa7.34□□□□□ -1.23
HLA-DQA1-205ENST00000460633 TMOD4Q9NZQ9 345 aa7.34□□□□□ -1.23
HLA-DQA1-205ENST00000460633 PNMA2Q9UL42 364 aa7.34□□□□□ -1.23
HLA-DQA1-205ENST00000460633 FKBP5Q13451 457 aaPredicted RBP7.34□□□□□ -1.23
HLA-DQA1-205ENST00000460633 GPHNQ9NQX3 736 aaPredicted RBP7.34□□□□□ -1.23
HLA-DQA1-205ENST00000460633 BMP2KQ9NSY1 1161 aaPredicted RBP7.34□□□□□ -1.23
HLA-DQA1-205ENST00000460633 USP32Q8NFA0 1604 aa7.34□□□□□ -1.23
HLA-DQA1-205ENST00000460633 ABCC6O95255 1503 aa7.34□□□□□ -1.23
HLA-DQA1-205ENST00000460633 FAM177BA6PVY3 158 aa7.34□□□□□ -1.23
HLA-DQA1-205ENST00000460633 ZRSR2Q15696 482 aaKnown RBP7.34□□□□□ -1.23
HLA-DQA1-205ENST00000460633 BRINP3Q76B58 766 aa7.34□□□□□ -1.23
HLA-DQA1-205ENST00000460633 CNPY4Q8N129 248 aa7.34□□□□□ -1.23
HLA-DQA1-205ENST00000460633 SETDB2Q96T68 719 aa7.34□□□□□ -1.23
HLA-DQA1-205ENST00000460633 LRRFIP2Q9Y608 721 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms