RNA–Protein interactions for RNA: ENST00000460345.1

TNC-204, Transcript of tenascin C, humanhuman

TSL 3

Gene TNC, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-204ENST00000460345 EIF5P55010 431 aaKnown RBP12.43□□□□□ -0.42
TNC-204ENST00000460345 MVPQ14764 893 aaKnown RBP12.43□□□□□ -0.42
TNC-204ENST00000460345 EZH2Q15910 746 aaKnown RBP12.43□□□□□ -0.42
TNC-204ENST00000460345 DZIP3Q86Y13 1208 aaKnown RBP12.43□□□□□ -0.42
TNC-204ENST00000460345 PLBD2Q8NHP8 589 aa12.43□□□□□ -0.42
TNC-204ENST00000460345 ZBTB3Q9H5J0 574 aa12.43□□□□□ -0.42
TNC-204ENST00000460345 RTCBQ9Y3I0 505 aaKnown RBP12.43□□□□□ -0.42
TNC-204ENST00000460345 CICQ96RK0 1608 aaPredicted RBP12.43□□□□□ -0.42
TNC-204ENST00000460345 ADCY9O60503 1353 aa12.43□□□□□ -0.42
TNC-204ENST00000460345 TNS1Q9HBL0 1735 aaKnown RBP12.42□□□□□ -0.42
TNC-204ENST00000460345 A0A087WZG4 1122 aa12.42□□□□□ -0.42
TNC-204ENST00000460345 NEXNQ0ZGT2 675 aa12.42□□□□□ -0.42
TNC-204ENST00000460345 INTS3Q68E01 1043 aaKnown RBP12.42□□□□□ -0.42
TNC-204ENST00000460345 DEFB132Q7Z7B7 95 aa12.42□□□□□ -0.42
TNC-204ENST00000460345 CCDC125Q86Z20 511 aa12.42□□□□□ -0.42
TNC-204ENST00000460345 CAMKK2Q96RR4 588 aa12.42□□□□□ -0.42
TNC-204ENST00000460345 DDX19BQ9UMR2 479 aa12.42□□□□□ -0.42
TNC-204ENST00000460345 TBC1D2BQ9UPU7 963 aa12.42□□□□□ -0.42
TNC-204ENST00000460345 COL5A3P25940 1745 aaPredicted RBP12.42□□□□□ -0.42
TNC-204ENST00000460345 MYH14Q7Z406 1995 aaKnown RBP12.41□□□□□ -0.42
TNC-204ENST00000460345 SMIM5Q71RC9 77 aa12.41□□□□□ -0.42
TNC-204ENST00000460345 MYD88Q99836 296 aa12.41□□□□□ -0.42
TNC-204ENST00000460345 METTL22Q9BUU2 404 aaPredicted RBP12.41□□□□□ -0.42
TNC-204ENST00000460345 SRCIN1Q9C0H9 1055 aa12.41□□□□□ -0.42
TNC-204ENST00000460345 MAP3K15Q6ZN16 1313 aa12.4□□□□□ -0.42
TNC-204ENST00000460345 TAF1LQ8IZX4 1826 aa12.4□□□□□ -0.42
TNC-204ENST00000460345 PHF14O94880 888 aa12.4□□□□□ -0.42
TNC-204ENST00000460345 TRAPPC3LQ5T215 181 aa12.4□□□□□ -0.42
TNC-204ENST00000460345 BEND3Q5T5X7 828 aa12.4□□□□□ -0.42
TNC-204ENST00000460345 CHMP4BQ9H444 224 aaKnown RBP12.4□□□□□ -0.42
TNC-204ENST00000460345 COL15A1P39059 1388 aa12.4□□□□□ -0.42
TNC-204ENST00000460345 C4BP0C0L5 1744 aa12.4□□□□□ -0.43
TNC-204ENST00000460345 ERVV-1B6SEH8 477 aa12.39□□□□□ -0.43
TNC-204ENST00000460345 ERICH6BQ5W0A0 696 aa12.39□□□□□ -0.43
TNC-204ENST00000460345 LINS1Q8NG48 757 aa12.39□□□□□ -0.43
TNC-204ENST00000460345 RREB1Q92766 1687 aa12.38□□□□□ -0.43
TNC-204ENST00000460345 ATP5J2-PTCD1G3V325 749 aa12.38□□□□□ -0.43
TNC-204ENST00000460345 ZPR1O75312 459 aa12.38□□□□□ -0.43
TNC-204ENST00000460345 ALDH1L1O75891 902 aa12.38□□□□□ -0.43
TNC-204ENST00000460345 CAMTA2O94983 1202 aa12.38□□□□□ -0.43
TNC-204ENST00000460345 RFC4P35249 363 aa12.38□□□□□ -0.43
TNC-204ENST00000460345 HLFQ16534 295 aa12.38□□□□□ -0.43
TNC-204ENST00000460345 CWF19L2Q2TBE0 894 aaKnown RBP12.38□□□□□ -0.43
TNC-204ENST00000460345 HSP90AB3PQ58FF7 597 aa12.38□□□□□ -0.43
TNC-204ENST00000460345 ARHGEF1Q92888 912 aaKnown RBP12.38□□□□□ -0.43
TNC-204ENST00000460345 TFCP2L1Q9NZI6 479 aa12.38□□□□□ -0.43
TNC-204ENST00000460345 PXDNLA1KZ92 1463 aa12.38□□□□□ -0.43
TNC-204ENST00000460345 ATP10DQ9P241 1426 aa12.37□□□□□ -0.43
TNC-204ENST00000460345 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.37□□□□□ -0.43
TNC-204ENST00000460345 ZBTB7BO15156 539 aaPredicted RBP12.37□□□□□ -0.43
TNC-204ENST00000460345 IGKV5-2P06315 115 aa12.37□□□□□ -0.43
TNC-204ENST00000460345 SSFA2P28290 1259 aa12.37□□□□□ -0.43
TNC-204ENST00000460345 TCIRG1Q13488 830 aa12.37□□□□□ -0.43
TNC-204ENST00000460345 ZNF827Q17R98 1081 aa12.37□□□□□ -0.43
TNC-204ENST00000460345 GIGYF2Q6Y7W6 1299 aaKnown RBP12.37□□□□□ -0.43
TNC-204ENST00000460345 AMIGO3Q86WK7 504 aa12.37□□□□□ -0.43
TNC-204ENST00000460345 AKT1S1Q96B36 256 aa12.37□□□□□ -0.43
TNC-204ENST00000460345 ZNF652Q9Y2D9 606 aa12.37□□□□□ -0.43
TNC-204ENST00000460345 RGPD3A6NKT7 1758 aaPredicted RBP12.37□□□□□ -0.43
TNC-204ENST00000460345 RGPD4Q7Z3J3 1758 aa12.37□□□□□ -0.43
TNC-204ENST00000460345 NEURL1BA8MQ27 555 aa12.36□□□□□ -0.43
TNC-204ENST00000460345 USPL1Q5W0Q7 1092 aa12.36□□□□□ -0.43
TNC-204ENST00000460345 UPF1Q92900 1129 aaKnown RBP eCLIP12.36□□□□□ -0.43
TNC-204ENST00000460345 MEIS3Q99687 375 aa12.36□□□□□ -0.43
TNC-204ENST00000460345 STK32BQ9NY57 414 aa12.36□□□□□ -0.43
TNC-204ENST00000460345 C9orf78Q9NZ63 289 aaPredicted RBP12.36□□□□□ -0.43
TNC-204ENST00000460345 SRP68Q9UHB9 627 aaKnown RBP12.36□□□□□ -0.43
TNC-204ENST00000460345 NARFQ9UHQ1 456 aa12.36□□□□□ -0.43
TNC-204ENST00000460345 GNAI3P08754 354 aa12.35□□□□□ -0.43
TNC-204ENST00000460345 GPTP24298 496 aa12.35□□□□□ -0.43
TNC-204ENST00000460345 AAMPQ13685 434 aa12.35□□□□□ -0.43
TNC-204ENST00000460345 ISCA1Q9BUE6 129 aa12.35□□□□□ -0.43
TNC-204ENST00000460345 USP44Q9H0E7 712 aa12.35□□□□□ -0.43
TNC-204ENST00000460345 ZBTB40Q9NUA8 1239 aa12.35□□□□□ -0.43
TNC-204ENST00000460345 CWC25Q9NXE8 425 aaPredicted RBP12.35□□□□□ -0.43
TNC-204ENST00000460345 PPP4R2Q9NY27 417 aa12.35□□□□□ -0.43
TNC-204ENST00000460345 EP400Q96L91 3159 aa12.35□□□□□ -0.43
TNC-204ENST00000460345 ARFGEF2Q9Y6D5 1785 aa12.35□□□□□ -0.43
TNC-204ENST00000460345 UBTFL1P0CB47 393 aaPredicted RBP12.34□□□□□ -0.43
TNC-204ENST00000460345 GCKRQ14397 625 aa12.34□□□□□ -0.43
TNC-204ENST00000460345 SLC15A2Q16348 729 aa12.34□□□□□ -0.43
TNC-204ENST00000460345 CLEC4GQ6UXB4 293 aa12.34□□□□□ -0.43
TNC-204ENST00000460345 CCDC191Q8NCU4 936 aa12.34□□□□□ -0.43
TNC-204ENST00000460345 FLAD1Q8NFF5 587 aa12.34□□□□□ -0.43
TNC-204ENST00000460345 C1orf115Q9H7X2 142 aa12.34□□□□□ -0.43
TNC-204ENST00000460345 NUP188Q5SRE5 1749 aa12.34□□□□□ -0.43
TNC-204ENST00000460345 GRM8O00222 908 aa12.33□□□□□ -0.44
TNC-204ENST00000460345 GNAI2P04899 355 aa12.33□□□□□ -0.44
TNC-204ENST00000460345 TRIM28Q13263 835 aaKnown RBP12.33□□□□□ -0.44
TNC-204ENST00000460345 BICDL1Q6ZP65 573 aa12.33□□□□□ -0.44
TNC-204ENST00000460345 ILDR2Q71H61 639 aa12.33□□□□□ -0.44
TNC-204ENST00000460345 ZNF34Q8IZ26 560 aa12.33□□□□□ -0.44
TNC-204ENST00000460345 CNKSR2Q8WXI2 1034 aa12.33□□□□□ -0.44
TNC-204ENST00000460345 JARID2Q92833 1246 aaPredicted RBP12.33□□□□□ -0.44
TNC-204ENST00000460345 ANO8Q9HCE9 1232 aaPredicted RBP12.33□□□□□ -0.44
TNC-204ENST00000460345 HDAC5Q9UQL6 1122 aa12.33□□□□□ -0.44
TNC-204ENST00000460345 NIP7Q9Y221 180 aaKnown RBP eCLIP12.33□□□□□ -0.44
TNC-204ENST00000460345 USP42Q9H9J4 1324 aaKnown RBP12.33□□□□□ -0.44
TNC-204ENST00000460345 UBR3Q6ZT12 1888 aa12.32□□□□□ -0.44
TNC-204ENST00000460345 FAM177BA6PVY3 158 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms