RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 PHAXQ9H814 394 aaKnown RBP15.65■□□□□ 0.1
HDAC4-206ENST00000460235 TAF1LQ8IZX4 1826 aa15.64■□□□□ 0.09
HDAC4-206ENST00000460235 PHF14O94880 888 aa15.64■□□□□ 0.09
HDAC4-206ENST00000460235 ANXA1P04083 346 aa15.64■□□□□ 0.09
HDAC4-206ENST00000460235 CCT4P50991 539 aaKnown RBP15.64■□□□□ 0.09
HDAC4-206ENST00000460235 PDE3AQ14432 1141 aa15.64■□□□□ 0.09
HDAC4-206ENST00000460235 NLGN1Q8N2Q7 840 aa15.64■□□□□ 0.09
HDAC4-206ENST00000460235 DNAAF4Q8WXU2 420 aa15.64■□□□□ 0.09
HDAC4-206ENST00000460235 ARHGEF1Q92888 912 aaKnown RBP15.64■□□□□ 0.09
HDAC4-206ENST00000460235 PI4KAP2A4QPH2 592 aa15.63■□□□□ 0.09
HDAC4-206ENST00000460235 SOCS7O14512 581 aa15.63■□□□□ 0.09
HDAC4-206ENST00000460235 HSP90B1P14625 803 aaKnown RBP15.63■□□□□ 0.09
HDAC4-206ENST00000460235 PIP4K2AP48426 406 aaPredicted RBP15.63■□□□□ 0.09
HDAC4-206ENST00000460235 GIGYF2Q6Y7W6 1299 aaKnown RBP15.63■□□□□ 0.09
HDAC4-206ENST00000460235 LRP10Q7Z4F1 713 aa15.63■□□□□ 0.09
HDAC4-206ENST00000460235 DZIP1LQ8IYY4 767 aaKnown RBP15.63■□□□□ 0.09
HDAC4-206ENST00000460235 PI4KAP1Q8N8J0 262 aa15.63■□□□□ 0.09
HDAC4-206ENST00000460235 TBC1D2BQ9UPU7 963 aa15.63■□□□□ 0.09
HDAC4-206ENST00000460235 RREB1Q92766 1687 aa15.63■□□□□ 0.09
HDAC4-206ENST00000460235 NEFLP07196 543 aa15.62■□□□□ 0.09
HDAC4-206ENST00000460235 METTL22Q9BUU2 404 aaPredicted RBP15.62■□□□□ 0.09
HDAC4-206ENST00000460235 MAP3K2Q9Y2U5 619 aa15.62■□□□□ 0.09
HDAC4-206ENST00000460235 RRP1P56182 461 aaKnown RBP15.61■□□□□ 0.09
HDAC4-206ENST00000460235 ZNF827Q17R98 1081 aa15.61■□□□□ 0.09
HDAC4-206ENST00000460235 PARP10Q53GL7 1025 aa15.61■□□□□ 0.09
HDAC4-206ENST00000460235 SLC4A10Q6U841 1118 aa15.61■□□□□ 0.09
HDAC4-206ENST00000460235 TTLL7Q6ZT98 887 aa15.61■□□□□ 0.09
HDAC4-206ENST00000460235 G2E3Q7L622 706 aa15.61■□□□□ 0.09
HDAC4-206ENST00000460235 LINS1Q8NG48 757 aa15.61■□□□□ 0.09
HDAC4-206ENST00000460235 ZBTB3Q9H5J0 574 aa15.61■□□□□ 0.09
HDAC4-206ENST00000460235 USP42Q9H9J4 1324 aaKnown RBP15.61■□□□□ 0.09
HDAC4-206ENST00000460235 ALDH1L1O75891 902 aa15.6■□□□□ 0.09
HDAC4-206ENST00000460235 CAMTA2O94983 1202 aa15.6■□□□□ 0.09
HDAC4-206ENST00000460235 TRIM28Q13263 835 aaKnown RBP15.6■□□□□ 0.09
HDAC4-206ENST00000460235 TCIRG1Q13488 830 aa15.6■□□□□ 0.09
HDAC4-206ENST00000460235 SETDB2Q96T68 719 aa15.6■□□□□ 0.09
HDAC4-206ENST00000460235 SRCIN1Q9C0H9 1055 aa15.6■□□□□ 0.09
HDAC4-206ENST00000460235 SUPT16HQ9Y5B9 1047 aaKnown RBP15.6■□□□□ 0.09
HDAC4-206ENST00000460235 MYH14Q7Z406 1995 aaKnown RBP15.59■□□□□ 0.09
HDAC4-206ENST00000460235 TRIM27P14373 513 aa15.59■□□□□ 0.09
HDAC4-206ENST00000460235 AAMPQ13685 434 aa15.59■□□□□ 0.09
HDAC4-206ENST00000460235 PPP1R42Q7Z4L9 355 aa15.59■□□□□ 0.09
HDAC4-206ENST00000460235 COL23A1Q86Y22 540 aaPredicted RBP15.59■□□□□ 0.09
HDAC4-206ENST00000460235 CCDC191Q8NCU4 936 aa15.59■□□□□ 0.09
HDAC4-206ENST00000460235 EP400Q96L91 3159 aa15.59■□□□□ 0.09
HDAC4-206ENST00000460235 NUP188Q5SRE5 1749 aa15.58■□□□□ 0.08
HDAC4-206ENST00000460235 USPL1Q5W0Q7 1092 aa15.58■□□□□ 0.08
HDAC4-206ENST00000460235 NYXQ9GZU5 481 aa15.58■□□□□ 0.08
HDAC4-206ENST00000460235 ANO8Q9HCE9 1232 aaPredicted RBP15.58■□□□□ 0.08
HDAC4-206ENST00000460235 PNPLA7Q6ZV29 1317 aa15.58■□□□□ 0.08
HDAC4-206ENST00000460235 PXDNLA1KZ92 1463 aa15.58■□□□□ 0.08
HDAC4-206ENST00000460235 NPHP1O15259 732 aa15.57■□□□□ 0.08
HDAC4-206ENST00000460235 INTS3Q68E01 1043 aaKnown RBP15.57■□□□□ 0.08
HDAC4-206ENST00000460235 MYD88Q99836 296 aa15.57■□□□□ 0.08
HDAC4-206ENST00000460235 CWC25Q9NXE8 425 aaPredicted RBP15.57■□□□□ 0.08
HDAC4-206ENST00000460235 DDX19BQ9UMR2 479 aa15.57■□□□□ 0.08
HDAC4-206ENST00000460235 NIP7Q9Y221 180 aaKnown RBP eCLIP15.57■□□□□ 0.08
HDAC4-206ENST00000460235 RNF123Q5XPI4 1314 aa15.57■□□□□ 0.08
HDAC4-206ENST00000460235 IBTKQ9P2D0 1353 aaPredicted RBP15.57■□□□□ 0.08
HDAC4-206ENST00000460235 ATP10DQ9P241 1426 aa15.57■□□□□ 0.08
HDAC4-206ENST00000460235 F6X3S4 739 aa15.56■□□□□ 0.08
HDAC4-206ENST00000460235 GTF2E1P29083 439 aaPredicted RBP15.56■□□□□ 0.08
HDAC4-206ENST00000460235 TPTE2Q6XPS3 522 aa15.56■□□□□ 0.08
HDAC4-206ENST00000460235 CLUAP1Q96AJ1 413 aa15.56■□□□□ 0.08
HDAC4-206ENST00000460235 C9orf78Q9NZ63 289 aaPredicted RBP15.56■□□□□ 0.08
HDAC4-206ENST00000460235 ABCC4O15439 1325 aa15.56■□□□□ 0.08
HDAC4-206ENST00000460235 ADCY9O60503 1353 aa15.56■□□□□ 0.08
HDAC4-206ENST00000460235 UBR3Q6ZT12 1888 aa15.56■□□□□ 0.08
HDAC4-206ENST00000460235 GNAI3P08754 354 aa15.55■□□□□ 0.08
HDAC4-206ENST00000460235 GYS1P13807 737 aa15.55■□□□□ 0.08
HDAC4-206ENST00000460235 ITPRIPQ8IWB1 547 aa15.55■□□□□ 0.08
HDAC4-206ENST00000460235 ZNF34Q8IZ26 560 aa15.55■□□□□ 0.08
HDAC4-206ENST00000460235 PARP3Q9Y6F1 533 aa15.55■□□□□ 0.08
HDAC4-206ENST00000460235 QSER1Q2KHR3 1735 aa15.54■□□□□ 0.08
HDAC4-206ENST00000460235 POLD1P28340 1107 aa15.54■□□□□ 0.08
HDAC4-206ENST00000460235 R3HDM1Q15032 1099 aaKnown RBP15.54■□□□□ 0.08
HDAC4-206ENST00000460235 HLFQ16534 295 aa15.54■□□□□ 0.08
HDAC4-206ENST00000460235 BEND3Q5T5X7 828 aa15.54■□□□□ 0.08
HDAC4-206ENST00000460235 ISCA1Q9BUE6 129 aa15.54■□□□□ 0.08
HDAC4-206ENST00000460235 UTP14AQ9BVJ6 771 aaKnown RBP15.54■□□□□ 0.08
HDAC4-206ENST00000460235 MTFR1LQ9H019 292 aa15.54■□□□□ 0.08
HDAC4-206ENST00000460235 SRP68Q9UHB9 627 aaKnown RBP15.54■□□□□ 0.08
HDAC4-206ENST00000460235 CARMIL3Q8ND23 1372 aa15.53■□□□□ 0.08
HDAC4-206ENST00000460235 NEURL1BA8MQ27 555 aa15.53■□□□□ 0.08
HDAC4-206ENST00000460235 PLIN1O60240 522 aa15.53■□□□□ 0.08
HDAC4-206ENST00000460235 MVPQ14764 893 aaKnown RBP15.53■□□□□ 0.08
HDAC4-206ENST00000460235 ATP5J2-PTCD1G3V325 749 aa15.52■□□□□ 0.08
HDAC4-206ENST00000460235 FKBP8Q14318 412 aa15.52■□□□□ 0.08
HDAC4-206ENST00000460235 GCKRQ14397 625 aa15.52■□□□□ 0.08
HDAC4-206ENST00000460235 NLRP10Q86W26 655 aa15.52■□□□□ 0.08
HDAC4-206ENST00000460235 NBPF5PQ86XG9 351 aaPredicted RBP15.52■□□□□ 0.08
HDAC4-206ENST00000460235 TMEM57Q8N5G2 664 aa15.52■□□□□ 0.08
HDAC4-206ENST00000460235 TRMT112Q9UI30 125 aaKnown RBP15.52■□□□□ 0.08
HDAC4-206ENST00000460235 UBTFL1P0CB47 393 aaPredicted RBP15.51■□□□□ 0.07
HDAC4-206ENST00000460235 GPTP24298 496 aa15.51■□□□□ 0.07
HDAC4-206ENST00000460235 ST5P78524 1137 aa15.51■□□□□ 0.07
HDAC4-206ENST00000460235 TBC1D9BQ66K14 1250 aa15.51■□□□□ 0.07
HDAC4-206ENST00000460235 BICDL1Q6ZP65 573 aa15.51■□□□□ 0.07
HDAC4-206ENST00000460235 ZBTB38Q8NAP3 1195 aaPredicted RBP15.51■□□□□ 0.07
HDAC4-206ENST00000460235 SH3TC1Q8TE82 1336 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms