RNA–Protein interactions for RNA: ENST00000460207.1

RUNX1-209, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-209ENST00000460207 SMC1BQ8NDV3 1235 aa21.72■■□□□ 1.07
RUNX1-209ENST00000460207 TNRC6CQ9HCJ0 1690 aaKnown RBP21.72■■□□□ 1.07
RUNX1-209ENST00000460207 NBPF26B4DH59 902 aa21.71■■□□□ 1.07
RUNX1-209ENST00000460207 DPY19L2Q6NUT2 758 aa21.71■■□□□ 1.07
RUNX1-209ENST00000460207 NBPF10Q6P3W6 841 aaKnown RBP21.71■■□□□ 1.07
RUNX1-209ENST00000460207 NBPF15Q8N660 670 aa21.71■■□□□ 1.07
RUNX1-209ENST00000460207 PNISRQ8TF01 805 aaKnown RBP21.71■■□□□ 1.07
RUNX1-209ENST00000460207 MASTLQ96GX5 879 aa21.71■■□□□ 1.07
RUNX1-209ENST00000460207 LTBP3Q9NS15 1303 aa21.71■■□□□ 1.07
RUNX1-209ENST00000460207 CCDC88AQ3V6T2 1871 aa21.71■■□□□ 1.07
RUNX1-209ENST00000460207 PIP4K2AP48426 406 aaPredicted RBP21.7■■□□□ 1.06
RUNX1-209ENST00000460207 SOGA3Q5TF21 947 aa21.7■■□□□ 1.06
RUNX1-209ENST00000460207 TPTE2Q6XPS3 522 aa21.7■■□□□ 1.06
RUNX1-209ENST00000460207 NBPF5PQ86XG9 351 aaPredicted RBP21.7■■□□□ 1.06
RUNX1-209ENST00000460207 KLRG2A4D1S0 409 aaPredicted RBP21.69■■□□□ 1.06
RUNX1-209ENST00000460207 PNNQ9H307 717 aaKnown RBP21.69■■□□□ 1.06
RUNX1-209ENST00000460207 PLEKHF1Q96S99 279 aa21.68■■□□□ 1.06
RUNX1-209ENST00000460207 FER1L6Q2WGJ9 1857 aa21.67■■□□□ 1.06
RUNX1-209ENST00000460207 BCORQ6W2J9 1755 aa21.67■■□□□ 1.06
RUNX1-209ENST00000460207 ERFEQ4G0M1 354 aa21.67■■□□□ 1.06
RUNX1-209ENST00000460207 PRPF40BQ6NWY9 871 aaKnown RBP21.67■■□□□ 1.06
RUNX1-209ENST00000460207 MIS18AQ9NYP9 233 aa21.67■■□□□ 1.06
RUNX1-209ENST00000460207 NPR1P16066 1061 aa21.66■■□□□ 1.06
RUNX1-209ENST00000460207 KLRG1Q96E93 195 aa21.66■■□□□ 1.06
RUNX1-209ENST00000460207 TAOK3Q9H2K8 898 aa21.66■■□□□ 1.06
RUNX1-209ENST00000460207 ZNF219Q9P2Y4 722 aaPredicted RBP21.66■■□□□ 1.06
RUNX1-209ENST00000460207 NIP7Q9Y221 180 aaKnown RBP eCLIP21.66■■□□□ 1.06
RUNX1-209ENST00000460207 NFE2L2Q16236 605 aa21.65■■□□□ 1.06
RUNX1-209ENST00000460207 C7orf43Q8WVR3 580 aa21.65■■□□□ 1.06
RUNX1-209ENST00000460207 DICER1Q9UPY3 1922 aaKnown RBP21.65■■□□□ 1.06
RUNX1-209ENST00000460207 SLX4Q8IY92 1834 aa21.64■■□□□ 1.06
RUNX1-209ENST00000460207 COL11A2P13942 1736 aaPredicted RBP21.64■■□□□ 1.06
RUNX1-209ENST00000460207 WDR90Q96KV7 1748 aa21.64■■□□□ 1.06
RUNX1-209ENST00000460207 POTECB2RU33 542 aa21.64■■□□□ 1.05
RUNX1-209ENST00000460207 ERVV-1B6SEH8 477 aa21.64■■□□□ 1.05
RUNX1-209ENST00000460207 JMYQ8N9B5 988 aa21.63■■□□□ 1.05
RUNX1-209ENST00000460207 EIF4A1P60842 406 aaKnown RBP21.62■■□□□ 1.05
RUNX1-209ENST00000460207 HLFQ16534 295 aa21.61■■□□□ 1.05
RUNX1-209ENST00000460207 TIAM2Q8IVF5 1701 aa21.6■■□□□ 1.05
RUNX1-209ENST00000460207 ALDH1B1P30837 517 aa21.6■■□□□ 1.05
RUNX1-209ENST00000460207 HTRA3P83110 453 aa21.6■■□□□ 1.05
RUNX1-209ENST00000460207 CCDC93Q567U6 631 aa21.6■■□□□ 1.05
RUNX1-209ENST00000460207 DLG5Q8TDM6 1919 aa21.6■■□□□ 1.05
RUNX1-209ENST00000460207 GTF2E1P29083 439 aaPredicted RBP21.59■■□□□ 1.05
RUNX1-209ENST00000460207 RTKN2Q8IZC4 609 aa21.59■■□□□ 1.05
RUNX1-209ENST00000460207 NYXQ9GZU5 481 aa21.59■■□□□ 1.05
RUNX1-209ENST00000460207 ARFGEF2Q9Y6D5 1785 aa21.59■■□□□ 1.05
RUNX1-209ENST00000460207 MAPK8IP3Q9UPT6 1336 aa21.58■■□□□ 1.05
RUNX1-209ENST00000460207 MAP3K15Q6ZN16 1313 aa21.57■■□□□ 1.04
RUNX1-209ENST00000460207 RALBP1Q15311 655 aa21.57■■□□□ 1.04
RUNX1-209ENST00000460207 RRP7AQ9Y3A4 280 aaKnown RBP21.57■■□□□ 1.04
RUNX1-209ENST00000460207 PCNTO95613 3336 aa21.57■■□□□ 1.04
RUNX1-209ENST00000460207 ERBB4Q15303 1308 aa21.56■■□□□ 1.04
RUNX1-209ENST00000460207 FKBP4Q02790 459 aaKnown RBP eCLIP21.56■■□□□ 1.04
RUNX1-209ENST00000460207 CRY2Q49AN0 593 aa21.56■■□□□ 1.04
RUNX1-209ENST00000460207 KIF6Q6ZMV9 814 aa21.56■■□□□ 1.04
RUNX1-209ENST00000460207 THUMPD2Q9BTF0 503 aaKnown RBP21.56■■□□□ 1.04
RUNX1-209ENST00000460207 BABAM1Q9NWV8 329 aa21.56■■□□□ 1.04
RUNX1-209ENST00000460207 KDM3BQ7LBC6 1761 aa21.56■■□□□ 1.04
RUNX1-209ENST00000460207 FAM177BA6PVY3 158 aa21.55■■□□□ 1.04
RUNX1-209ENST00000460207 DDNO94850 711 aaPredicted RBP21.55■■□□□ 1.04
RUNX1-209ENST00000460207 NGEFQ8N5V2 710 aa21.55■■□□□ 1.04
RUNX1-209ENST00000460207 LAMB4A4D0S4 1761 aa21.55■■□□□ 1.04
RUNX1-209ENST00000460207 IQCA1LA6NCM1 817 aa21.54■■□□□ 1.04
RUNX1-209ENST00000460207 TTLL7Q6ZT98 887 aa21.54■■□□□ 1.04
RUNX1-209ENST00000460207 L3MBTL3Q96JM7 780 aaPredicted RBP21.54■■□□□ 1.04
RUNX1-209ENST00000460207 CACNA1SQ13698 1873 aa21.54■■□□□ 1.04
RUNX1-209ENST00000460207 HOXA10P31260 410 aaPredicted RBP21.53■■□□□ 1.04
RUNX1-209ENST00000460207 CC2D2BQ6DHV5 1058 aa21.53■■□□□ 1.04
RUNX1-209ENST00000460207 CHADLQ6NUI6 762 aa21.53■■□□□ 1.04
RUNX1-209ENST00000460207 NUP98P52948 1817 aa21.52■■□□□ 1.04
RUNX1-209ENST00000460207 MYL6BP14649 208 aa21.52■■□□□ 1.04
RUNX1-209ENST00000460207 RIPK4P57078 832 aa21.52■■□□□ 1.04
RUNX1-209ENST00000460207 GRIPAP1Q4V328 841 aa21.52■■□□□ 1.04
RUNX1-209ENST00000460207 ZNF34Q8IZ26 560 aa21.52■■□□□ 1.04
RUNX1-209ENST00000460207 TSPYL4Q9UJ04 414 aa21.52■■□□□ 1.04
RUNX1-209ENST00000460207 IBTKQ9P2D0 1353 aaPredicted RBP21.51■■□□□ 1.03
RUNX1-209ENST00000460207 GIGYF2Q6Y7W6 1299 aaKnown RBP21.51■■□□□ 1.03
RUNX1-209ENST00000460207 LMOD3Q0VAK6 560 aa21.5■■□□□ 1.03
RUNX1-209ENST00000460207 NUTM1Q86Y26 1132 aa21.5■■□□□ 1.03
RUNX1-209ENST00000460207 PSMD1Q99460 953 aa21.5■■□□□ 1.03
RUNX1-209ENST00000460207 ZNF277Q9NRM2 450 aaPredicted RBP21.5■■□□□ 1.03
RUNX1-209ENST00000460207 RIC1Q4ADV7 1423 aa21.49■■□□□ 1.03
RUNX1-209ENST00000460207 TMPOP42166 694 aaKnown RBP21.49■■□□□ 1.03
RUNX1-209ENST00000460207 OLFM4Q6UX06 510 aa21.49■■□□□ 1.03
RUNX1-209ENST00000460207 SYNE4Q8N205 404 aa21.49■■□□□ 1.03
RUNX1-209ENST00000460207 ZBTB3Q9H5J0 574 aa21.49■■□□□ 1.03
RUNX1-209ENST00000460207 FZD9O00144 591 aa21.48■■□□□ 1.03
RUNX1-209ENST00000460207 GPTP24298 496 aa21.48■■□□□ 1.03
RUNX1-209ENST00000460207 IARSP41252 1262 aaKnown RBP21.48■■□□□ 1.03
RUNX1-209ENST00000460207 PDIA6Q15084 440 aa21.48■■□□□ 1.03
RUNX1-209ENST00000460207 PARP10Q53GL7 1025 aa21.48■■□□□ 1.03
RUNX1-209ENST00000460207 SUSD4Q5VX71 490 aa21.48■■□□□ 1.03
RUNX1-209ENST00000460207 LRP10Q7Z4F1 713 aa21.48■■□□□ 1.03
RUNX1-209ENST00000460207 PPP1R42Q7Z4L9 355 aa21.48■■□□□ 1.03
RUNX1-209ENST00000460207 LDHDQ86WU2 507 aa21.48■■□□□ 1.03
RUNX1-209ENST00000460207 RPGRQ92834 1020 aaKnown RBP21.48■■□□□ 1.03
RUNX1-209ENST00000460207 CRAMP1Q96RY5 1269 aa21.48■■□□□ 1.03
RUNX1-209ENST00000460207 TAF1DQ9H5J8 278 aaPredicted RBP21.48■■□□□ 1.03
RUNX1-209ENST00000460207 UBN2Q6ZU65 1347 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms