RNA–Protein interactions for RNA: ENST00000460119.1

PDE6B-203, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-203ENST00000460119 CNKSR1Q969H4 720 aa29.01■■■□□ 2.23
PDE6B-203ENST00000460119 MIS18AQ9NYP9 233 aa29.01■■■□□ 2.23
PDE6B-203ENST00000460119 VIRMAQ69YN4 1812 aaKnown RBP29.01■■■□□ 2.23
PDE6B-203ENST00000460119 NBPF26B4DH59 902 aa29■■■□□ 2.23
PDE6B-203ENST00000460119 NBPF10Q6P3W6 841 aaKnown RBP29■■■□□ 2.23
PDE6B-203ENST00000460119 NBPF15Q8N660 670 aa29■■■□□ 2.23
PDE6B-203ENST00000460119 FAM177BA6PVY3 158 aa28.99■■■□□ 2.23
PDE6B-203ENST00000460119 DDNO94850 711 aaPredicted RBP28.99■■■□□ 2.23
PDE6B-203ENST00000460119 NBPF5PQ86XG9 351 aaPredicted RBP28.99■■■□□ 2.23
PDE6B-203ENST00000460119 MASTLQ96GX5 879 aa28.99■■■□□ 2.23
PDE6B-203ENST00000460119 TAOK3Q9H2K8 898 aa28.99■■■□□ 2.23
PDE6B-203ENST00000460119 POTEIP0CG38 1075 aa28.96■■■□□ 2.23
PDE6B-203ENST00000460119 POTEJP0CG39 1038 aa28.96■■■□□ 2.23
PDE6B-203ENST00000460119 ANKRD31Q8N7Z5 1873 aa28.95■■■□□ 2.23
PDE6B-203ENST00000460119 CLEC4GQ6UXB4 293 aa28.95■■■□□ 2.22
PDE6B-203ENST00000460119 C7orf43Q8WVR3 580 aa28.95■■■□□ 2.22
PDE6B-203ENST00000460119 TNRC6CQ9HCJ0 1690 aaKnown RBP28.95■■■□□ 2.22
PDE6B-203ENST00000460119 DLEC1Q9Y238 1755 aa28.94■■■□□ 2.22
PDE6B-203ENST00000460119 HLFQ16534 295 aa28.94■■■□□ 2.22
PDE6B-203ENST00000460119 OLFM4Q6UX06 510 aa28.94■■■□□ 2.22
PDE6B-203ENST00000460119 NIP7Q9Y221 180 aaKnown RBP eCLIP28.94■■■□□ 2.22
PDE6B-203ENST00000460119 LTBP3Q9NS15 1303 aa28.94■■■□□ 2.22
PDE6B-203ENST00000460119 SIPA1L3O60292 1781 aaPredicted RBP28.93■■■□□ 2.22
PDE6B-203ENST00000460119 TAF7Q15545 349 aaPredicted RBP28.92■■■□□ 2.22
PDE6B-203ENST00000460119 NGEFQ8N5V2 710 aa28.92■■■□□ 2.22
PDE6B-203ENST00000460119 SCN7AQ01118 1682 aa28.91■■■□□ 2.22
PDE6B-203ENST00000460119 ZNF652Q9Y2D9 606 aa28.91■■■□□ 2.22
PDE6B-203ENST00000460119 NPR1P16066 1061 aa28.9■■■□□ 2.22
PDE6B-203ENST00000460119 TPTE2Q6XPS3 522 aa28.9■■■□□ 2.22
PDE6B-203ENST00000460119 COL11A2P13942 1736 aaPredicted RBP28.89■■■□□ 2.22
PDE6B-203ENST00000460119 HTATSF1O43719 755 aaKnown RBP28.89■■■□□ 2.22
PDE6B-203ENST00000460119 CHADLQ6NUI6 762 aa28.89■■■□□ 2.22
PDE6B-203ENST00000460119 KLRG2A4D1S0 409 aaPredicted RBP28.88■■■□□ 2.21
PDE6B-203ENST00000460119 CAPN15O75808 1086 aa28.88■■■□□ 2.21
PDE6B-203ENST00000460119 SOGA3Q5TF21 947 aa28.88■■■□□ 2.21
PDE6B-203ENST00000460119 ZNF277Q9NRM2 450 aaPredicted RBP28.88■■■□□ 2.21
PDE6B-203ENST00000460119 HSPA1AP0DMV8 641 aaKnown RBP28.87■■■□□ 2.21
PDE6B-203ENST00000460119 HSPA1BP0DMV9 641 aaKnown RBP28.87■■■□□ 2.21
PDE6B-203ENST00000460119 CCDC93Q567U6 631 aa28.87■■■□□ 2.21
PDE6B-203ENST00000460119 SLX4Q8IY92 1834 aa28.87■■■□□ 2.21
PDE6B-203ENST00000460119 THUMPD2Q9BTF0 503 aaKnown RBP28.85■■■□□ 2.21
PDE6B-203ENST00000460119 CCDC88AQ3V6T2 1871 aa28.85■■■□□ 2.21
PDE6B-203ENST00000460119 TIAM2Q8IVF5 1701 aa28.84■■■□□ 2.21
PDE6B-203ENST00000460119 MKRN1Q9UHC7 482 aaKnown RBP28.84■■■□□ 2.21
PDE6B-203ENST00000460119 GTF2E1P29083 439 aaPredicted RBP28.83■■■□□ 2.21
PDE6B-203ENST00000460119 FKBP4Q02790 459 aaKnown RBP eCLIP28.83■■■□□ 2.21
PDE6B-203ENST00000460119 TNS4Q8IZW8 715 aa28.83■■■□□ 2.21
PDE6B-203ENST00000460119 RRP7AQ9Y3A4 280 aaKnown RBP28.83■■■□□ 2.21
PDE6B-203ENST00000460119 NUTM1Q86Y26 1132 aa28.82■■■□□ 2.2
PDE6B-203ENST00000460119 ZNF541Q9H0D2 1346 aa28.81■■■□□ 2.2
PDE6B-203ENST00000460119 TTLL7Q6ZT98 887 aa28.81■■■□□ 2.2
PDE6B-203ENST00000460119 SYNE4Q8N205 404 aa28.81■■■□□ 2.2
PDE6B-203ENST00000460119 TAF1DQ9H5J8 278 aaPredicted RBP28.81■■■□□ 2.2
PDE6B-203ENST00000460119 FER1L6Q2WGJ9 1857 aa28.8■■■□□ 2.2
PDE6B-203ENST00000460119 EIF4A1P60842 406 aaKnown RBP28.79■■■□□ 2.2
PDE6B-203ENST00000460119 CREBZFQ9NS37 354 aa28.79■■■□□ 2.2
PDE6B-203ENST00000460119 RGL2O15211 777 aa28.78■■■□□ 2.2
PDE6B-203ENST00000460119 MYL6BP14649 208 aa28.78■■■□□ 2.2
PDE6B-203ENST00000460119 GPTP24298 496 aa28.78■■■□□ 2.2
PDE6B-203ENST00000460119 EAPPQ56P03 285 aaPredicted RBP28.78■■■□□ 2.2
PDE6B-203ENST00000460119 L3MBTL3Q96JM7 780 aaPredicted RBP28.78■■■□□ 2.2
PDE6B-203ENST00000460119 PLEKHF1Q96S99 279 aa28.78■■■□□ 2.2
PDE6B-203ENST00000460119 SLC51AQ86UW1 340 aa28.77■■■□□ 2.2
PDE6B-203ENST00000460119 RTKN2Q8IZC4 609 aa28.77■■■□□ 2.2
PDE6B-203ENST00000460119 IQCA1LA6NCM1 817 aa28.76■■■□□ 2.19
PDE6B-203ENST00000460119 ALDH1B1P30837 517 aa28.76■■■□□ 2.19
PDE6B-203ENST00000460119 BCORQ6W2J9 1755 aa28.75■■■□□ 2.19
PDE6B-203ENST00000460119 LDHDQ86WU2 507 aa28.75■■■□□ 2.19
PDE6B-203ENST00000460119 PNISRQ8TF01 805 aaKnown RBP28.75■■■□□ 2.19
PDE6B-203ENST00000460119 ZBTB3Q9H5J0 574 aa28.75■■■□□ 2.19
PDE6B-203ENST00000460119 CLEC11AQ9Y240 323 aa28.75■■■□□ 2.19
PDE6B-203ENST00000460119 ABCC12Q96J65 1359 aa28.75■■■□□ 2.19
PDE6B-203ENST00000460119 ERVV-1B6SEH8 477 aa28.74■■■□□ 2.19
PDE6B-203ENST00000460119 NEFMP07197 916 aa28.74■■■□□ 2.19
PDE6B-203ENST00000460119 IARSP41252 1262 aaKnown RBP28.74■■■□□ 2.19
PDE6B-203ENST00000460119 NFE2L2Q16236 605 aa28.74■■■□□ 2.19
PDE6B-203ENST00000460119 MAP3K15Q6ZN16 1313 aa28.73■■■□□ 2.19
PDE6B-203ENST00000460119 PASKQ96RG2 1323 aa28.73■■■□□ 2.19
PDE6B-203ENST00000460119 ITGBL1O95965 494 aaPredicted RBP28.73■■■□□ 2.19
PDE6B-203ENST00000460119 SUSD4Q5VX71 490 aa28.73■■■□□ 2.19
PDE6B-203ENST00000460119 HACL1Q9UJ83 578 aa28.73■■■□□ 2.19
PDE6B-203ENST00000460119 TCERG1O14776 1098 aaKnown RBP28.72■■■□□ 2.19
PDE6B-203ENST00000460119 FZD9O00144 591 aa28.71■■■□□ 2.19
PDE6B-203ENST00000460119 EPHX2P34913 555 aa28.71■■■□□ 2.19
PDE6B-203ENST00000460119 CRY2Q49AN0 593 aa28.71■■■□□ 2.19
PDE6B-203ENST00000460119 NYXQ9GZU5 481 aa28.71■■■□□ 2.19
PDE6B-203ENST00000460119 RNF123Q5XPI4 1314 aa28.7■■■□□ 2.19
PDE6B-203ENST00000460119 UBN2Q6ZU65 1347 aa28.7■■■□□ 2.19
PDE6B-203ENST00000460119 KIF6Q6ZMV9 814 aa28.7■■■□□ 2.18
PDE6B-203ENST00000460119 C3orf67Q6ZVT6 689 aa28.7■■■□□ 2.18
PDE6B-203ENST00000460119 DICER1Q9UPY3 1922 aaKnown RBP28.69■■■□□ 2.18
PDE6B-203ENST00000460119 MAP1SQ66K74 1059 aaPredicted RBP28.68■■■□□ 2.18
PDE6B-203ENST00000460119 ZNF34Q8IZ26 560 aa28.67■■■□□ 2.18
PDE6B-203ENST00000460119 RPGRQ92834 1020 aaKnown RBP28.67■■■□□ 2.18
PDE6B-203ENST00000460119 GJA3Q9Y6H8 435 aa28.67■■■□□ 2.18
PDE6B-203ENST00000460119 CACNA1SQ13698 1873 aa28.67■■■□□ 2.18
PDE6B-203ENST00000460119 HOXA10P31260 410 aaPredicted RBP28.66■■■□□ 2.18
PDE6B-203ENST00000460119 VEGFBP49765 207 aa28.66■■■□□ 2.18
PDE6B-203ENST00000460119 PSMD1Q99460 953 aa28.66■■■□□ 2.18
PDE6B-203ENST00000460119 CNTNAP1P78357 1384 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms