RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 ADCY9O60503 1353 aa11.42□□□□□ -0.58
NUDCD3-203ENST00000460110 ALDH1L1O75891 902 aa11.42□□□□□ -0.58
NUDCD3-203ENST00000460110 GCKRQ14397 625 aa11.42□□□□□ -0.58
NUDCD3-203ENST00000460110 KIF6Q6ZMV9 814 aa11.42□□□□□ -0.58
NUDCD3-203ENST00000460110 UNC5CLQ8IV45 518 aa11.42□□□□□ -0.58
NUDCD3-203ENST00000460110 NEURL1BA8MQ27 555 aa11.42□□□□□ -0.58
NUDCD3-203ENST00000460110 LARP6Q9BRS8 491 aaKnown RBP11.42□□□□□ -0.58
NUDCD3-203ENST00000460110 EPHA10Q5JZY3 1008 aa11.41□□□□□ -0.58
NUDCD3-203ENST00000460110 BICDL1Q6ZP65 573 aa11.41□□□□□ -0.58
NUDCD3-203ENST00000460110 FAM89AQ96GI7 184 aa11.41□□□□□ -0.58
NUDCD3-203ENST00000460110 METTL22Q9BUU2 404 aaPredicted RBP11.41□□□□□ -0.58
NUDCD3-203ENST00000460110 UPF3BQ9BZI7 483 aaKnown RBP11.41□□□□□ -0.58
NUDCD3-203ENST00000460110 ERC2O15083 957 aa11.41□□□□□ -0.58
NUDCD3-203ENST00000460110 NBPF26B4DH59 902 aa11.41□□□□□ -0.58
NUDCD3-203ENST00000460110 NEK4P51957 841 aa11.41□□□□□ -0.58
NUDCD3-203ENST00000460110 PDIA6Q15084 440 aa11.41□□□□□ -0.58
NUDCD3-203ENST00000460110 NBPF14Q5TI25 921 aa11.41□□□□□ -0.58
NUDCD3-203ENST00000460110 NBPF10Q6P3W6 841 aaKnown RBP11.41□□□□□ -0.58
NUDCD3-203ENST00000460110 NBPF15Q8N660 670 aa11.41□□□□□ -0.58
NUDCD3-203ENST00000460110 SSH3Q8TE77 659 aa11.41□□□□□ -0.58
NUDCD3-203ENST00000460110 ZNF594Q96JF6 807 aaPredicted RBP11.41□□□□□ -0.58
NUDCD3-203ENST00000460110 ZNF142P52746 1687 aaPredicted RBP11.41□□□□□ -0.58
NUDCD3-203ENST00000460110 DTNBO60941 627 aa11.4□□□□□ -0.58
NUDCD3-203ENST00000460110 KDM6AO15550 1401 aaPredicted RBP11.4□□□□□ -0.58
NUDCD3-203ENST00000460110 MCCP23508 829 aa11.4□□□□□ -0.58
NUDCD3-203ENST00000460110 GTF2E1P29083 439 aaPredicted RBP11.4□□□□□ -0.58
NUDCD3-203ENST00000460110 ATP10DQ9P241 1426 aa11.4□□□□□ -0.58
NUDCD3-203ENST00000460110 LTN1O94822 1766 aa11.4□□□□□ -0.58
NUDCD3-203ENST00000460110 ERVV-2B6SEH9 535 aa11.4□□□□□ -0.59
NUDCD3-203ENST00000460110 FSD1Q9BTV5 496 aa11.4□□□□□ -0.59
NUDCD3-203ENST00000460110 DCCP43146 1447 aa11.4□□□□□ -0.59
NUDCD3-203ENST00000460110 NWD1Q149M9 1564 aa11.39□□□□□ -0.59
NUDCD3-203ENST00000460110 CWC25Q9NXE8 425 aaPredicted RBP11.39□□□□□ -0.59
NUDCD3-203ENST00000460110 RAB11FIP3O75154 756 aa11.39□□□□□ -0.59
NUDCD3-203ENST00000460110 SMIM5Q71RC9 77 aa11.39□□□□□ -0.59
NUDCD3-203ENST00000460110 CNTROBQ8N137 903 aa11.39□□□□□ -0.59
NUDCD3-203ENST00000460110 SYNE4Q8N205 404 aa11.39□□□□□ -0.59
NUDCD3-203ENST00000460110 EDC3Q96F86 508 aaKnown RBP11.39□□□□□ -0.59
NUDCD3-203ENST00000460110 ATP6V1AP38606 617 aa11.39□□□□□ -0.59
NUDCD3-203ENST00000460110 MED1Q15648 1581 aaPredicted RBP11.38□□□□□ -0.59
NUDCD3-203ENST00000460110 NCLP19338 710 aaKnown RBP11.37□□□□□ -0.59
NUDCD3-203ENST00000460110 CCDC57Q2TAC2 916 aa11.37□□□□□ -0.59
NUDCD3-203ENST00000460110 PLBD2Q8NHP8 589 aa11.37□□□□□ -0.59
NUDCD3-203ENST00000460110 TRMT112Q9UI30 125 aaKnown RBP11.37□□□□□ -0.59
NUDCD3-203ENST00000460110 NAP1L2Q9ULW6 460 aaPredicted RBP11.37□□□□□ -0.59
NUDCD3-203ENST00000460110 TIMM10P62072 90 aa11.37□□□□□ -0.59
NUDCD3-203ENST00000460110 SNRKQ9NRH2 765 aa11.37□□□□□ -0.59
NUDCD3-203ENST00000460110 TLR7Q9NYK1 1049 aaKnown RBP11.37□□□□□ -0.59
NUDCD3-203ENST00000460110 RGPD2P0DJD1 1756 aa11.37□□□□□ -0.59
NUDCD3-203ENST00000460110 TFCP2Q12800 502 aa11.37□□□□□ -0.59
NUDCD3-203ENST00000460110 ECHDC1Q9NTX5 307 aa11.37□□□□□ -0.59
NUDCD3-203ENST00000460110 ZBTB1Q9Y2K1 713 aa11.37□□□□□ -0.59
NUDCD3-203ENST00000460110 CAMTA1Q9Y6Y1 1673 aa11.37□□□□□ -0.59
NUDCD3-203ENST00000460110 KCNQ2O43526 872 aa11.36□□□□□ -0.59
NUDCD3-203ENST00000460110 ST18O60284 1047 aa11.36□□□□□ -0.59
NUDCD3-203ENST00000460110 CD2BP2O95400 341 aaKnown RBP11.36□□□□□ -0.59
NUDCD3-203ENST00000460110 ERC1Q8IUD2 1116 aa11.36□□□□□ -0.59
NUDCD3-203ENST00000460110 EAF2Q96CJ1 260 aaPredicted RBP11.36□□□□□ -0.59
NUDCD3-203ENST00000460110 ATG3Q9NT62 314 aa11.36□□□□□ -0.59
NUDCD3-203ENST00000460110 IBTKQ9P2D0 1353 aaPredicted RBP11.36□□□□□ -0.59
NUDCD3-203ENST00000460110 CPDO75976 1380 aa11.36□□□□□ -0.59
NUDCD3-203ENST00000460110 HEG1Q9ULI3 1381 aa11.36□□□□□ -0.59
NUDCD3-203ENST00000460110 NCOA3Q9Y6Q9 1424 aa11.36□□□□□ -0.59
NUDCD3-203ENST00000460110 GLRX3O76003 335 aaKnown RBP11.36□□□□□ -0.59
NUDCD3-203ENST00000460110 FKBP4Q02790 459 aaKnown RBP eCLIP11.35□□□□□ -0.59
NUDCD3-203ENST00000460110 CHMLP26374 656 aa11.35□□□□□ -0.59
NUDCD3-203ENST00000460110 FGD1P98174 961 aa11.35□□□□□ -0.59
NUDCD3-203ENST00000460110 DDX46Q7L014 1031 aaKnown RBP11.35□□□□□ -0.59
NUDCD3-203ENST00000460110 CCDC24Q8N4L8 307 aa11.35□□□□□ -0.59
NUDCD3-203ENST00000460110 ESYT1Q9BSJ8 1104 aa11.35□□□□□ -0.59
NUDCD3-203ENST00000460110 USP26Q9BXU7 913 aa11.35□□□□□ -0.59
NUDCD3-203ENST00000460110 CNNM1Q9NRU3 951 aa11.35□□□□□ -0.59
NUDCD3-203ENST00000460110 NCAPD2Q15021 1401 aa11.35□□□□□ -0.59
NUDCD3-203ENST00000460110 DZIP3Q86Y13 1208 aaKnown RBP11.34□□□□□ -0.59
NUDCD3-203ENST00000460110 HELBQ8NG08 1087 aaPredicted RBP11.34□□□□□ -0.59
NUDCD3-203ENST00000460110 HLFQ16534 295 aa11.34□□□□□ -0.59
NUDCD3-203ENST00000460110 KAZALD1Q96I82 304 aa11.34□□□□□ -0.59
NUDCD3-203ENST00000460110 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.34□□□□□ -0.59
NUDCD3-203ENST00000460110 SASH1O94885 1247 aa11.34□□□□□ -0.59
NUDCD3-203ENST00000460110 DBNDD2Q9BQY9 259 aa11.34□□□□□ -0.59
NUDCD3-203ENST00000460110 CEP126Q9P2H0 1117 aa11.34□□□□□ -0.59
NUDCD3-203ENST00000460110 HCLS1P14317 486 aaPredicted RBP11.33□□□□□ -0.6
NUDCD3-203ENST00000460110 CPA1P15085 419 aa11.33□□□□□ -0.6
NUDCD3-203ENST00000460110 COL5A2P05997 1499 aaPredicted RBP11.33□□□□□ -0.6
NUDCD3-203ENST00000460110 SLIT3O75094 1523 aa11.33□□□□□ -0.6
NUDCD3-203ENST00000460110 K7ELQ4 463 aaPredicted RBP11.33□□□□□ -0.6
NUDCD3-203ENST00000460110 POLA2Q14181 598 aa11.33□□□□□ -0.6
NUDCD3-203ENST00000460110 PUS3Q9BZE2 481 aaKnown RBP11.33□□□□□ -0.6
NUDCD3-203ENST00000460110 CHMP5Q9NZZ3 219 aa11.33□□□□□ -0.6
NUDCD3-203ENST00000460110 RABEP1Q15276 862 aa11.33□□□□□ -0.6
NUDCD3-203ENST00000460110 LRRC24Q50LG9 513 aa11.33□□□□□ -0.6
NUDCD3-203ENST00000460110 TCEANC2Q96MN5 208 aa11.33□□□□□ -0.6
NUDCD3-203ENST00000460110 PALD1Q9ULE6 856 aa11.32□□□□□ -0.6
NUDCD3-203ENST00000460110 RGPD1P0DJD0 1748 aa11.32□□□□□ -0.6
NUDCD3-203ENST00000460110 STRCP1A6NGW2 1772 aa11.32□□□□□ -0.6
NUDCD3-203ENST00000460110 IFIT5Q13325 482 aaKnown RBP11.32□□□□□ -0.6
NUDCD3-203ENST00000460110 PRPF40BQ6NWY9 871 aaKnown RBP11.32□□□□□ -0.6
NUDCD3-203ENST00000460110 LDHAL6AQ6ZMR3 332 aa11.32□□□□□ -0.6
NUDCD3-203ENST00000460110 IL27Q8NEV9 243 aa11.32□□□□□ -0.6
NUDCD3-203ENST00000460110 RUFY2Q8WXA3 655 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms