RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 MTX1Q13505 466 aa7.41□□□□□ -1.22
UBQLN4-202ENST00000459954 VPS72Q15906 364 aa7.41□□□□□ -1.22
UBQLN4-202ENST00000459954 SLC4A10Q6U841 1118 aa7.41□□□□□ -1.22
UBQLN4-202ENST00000459954 HOMEZQ8IX15 550 aa7.41□□□□□ -1.22
UBQLN4-202ENST00000459954 ZGPATQ8N5A5 531 aaKnown RBP7.41□□□□□ -1.22
UBQLN4-202ENST00000459954 KCNB2Q92953 911 aa7.41□□□□□ -1.22
UBQLN4-202ENST00000459954 KIF1BPQ96EK5 621 aa7.41□□□□□ -1.22
UBQLN4-202ENST00000459954 C8orf37Q96NL8 207 aa7.41□□□□□ -1.22
UBQLN4-202ENST00000459954 TM6SF1Q9BZW5 370 aa7.41□□□□□ -1.22
UBQLN4-202ENST00000459954 QTRT2Q9H974 415 aaKnown RBP7.41□□□□□ -1.22
UBQLN4-202ENST00000459954 CCDC39Q9UFE4 941 aa7.41□□□□□ -1.22
UBQLN4-202ENST00000459954 AFF2P51816 1311 aa7.41□□□□□ -1.22
UBQLN4-202ENST00000459954 SCN11AQ9UI33 1791 aa7.41□□□□□ -1.22
UBQLN4-202ENST00000459954 PNMA6EA0A0J9YXQ4 647 aa7.4□□□□□ -1.22
UBQLN4-202ENST00000459954 F6X3S4 739 aa7.4□□□□□ -1.22
UBQLN4-202ENST00000459954 SGSM2O43147 1006 aa7.4□□□□□ -1.22
UBQLN4-202ENST00000459954 NCLP19338 710 aaKnown RBP7.4□□□□□ -1.22
UBQLN4-202ENST00000459954 EVA1CP58658 441 aa7.4□□□□□ -1.22
UBQLN4-202ENST00000459954 IL17REQ8NFR9 667 aa7.4□□□□□ -1.22
UBQLN4-202ENST00000459954 RUFY2Q8WXA3 655 aa7.4□□□□□ -1.22
UBQLN4-202ENST00000459954 IP6K1Q92551 441 aa7.4□□□□□ -1.22
UBQLN4-202ENST00000459954 ZSCAN31Q96LW9 406 aaPredicted RBP7.4□□□□□ -1.22
UBQLN4-202ENST00000459954 MAP7D2Q96T17 732 aa7.4□□□□□ -1.22
UBQLN4-202ENST00000459954 RBSNQ9H1K0 784 aa7.4□□□□□ -1.22
UBQLN4-202ENST00000459954 TMEM63CQ9P1W3 806 aa7.4□□□□□ -1.22
UBQLN4-202ENST00000459954 EXOC6BQ9Y2D4 811 aa7.4□□□□□ -1.22
UBQLN4-202ENST00000459954 ZKSCAN5Q9Y2L8 839 aa7.4□□□□□ -1.22
UBQLN4-202ENST00000459954 ATP6V1DQ9Y5K8 247 aa7.4□□□□□ -1.22
UBQLN4-202ENST00000459954 RAD50Q92878 1312 aa7.4□□□□□ -1.22
UBQLN4-202ENST00000459954 PLEKHG2Q9H7P9 1386 aa7.4□□□□□ -1.22
UBQLN4-202ENST00000459954 SLIT2O94813 1529 aa7.4□□□□□ -1.22
UBQLN4-202ENST00000459954 SLIT3O75094 1523 aa7.39□□□□□ -1.23
UBQLN4-202ENST00000459954 ALDH1L1O75891 902 aa7.39□□□□□ -1.23
UBQLN4-202ENST00000459954 HMGB2P26583 209 aaKnown RBP7.39□□□□□ -1.23
UBQLN4-202ENST00000459954 PRIM1P49642 420 aaKnown RBP7.39□□□□□ -1.23
UBQLN4-202ENST00000459954 PKP1Q13835 747 aa7.39□□□□□ -1.23
UBQLN4-202ENST00000459954 BARGINQ6ZT62 677 aa7.39□□□□□ -1.23
UBQLN4-202ENST00000459954 ERC1Q8IUD2 1116 aa7.39□□□□□ -1.23
UBQLN4-202ENST00000459954 CNTROBQ8N137 903 aa7.39□□□□□ -1.23
UBQLN4-202ENST00000459954 PI4K2BQ8TCG2 481 aa7.39□□□□□ -1.23
UBQLN4-202ENST00000459954 GJD4Q96KN9 370 aaPredicted RBP7.39□□□□□ -1.23
UBQLN4-202ENST00000459954 TTC14Q96N46 770 aa7.39□□□□□ -1.23
UBQLN4-202ENST00000459954 TSPY26PQ9H489 355 aa7.39□□□□□ -1.23
UBQLN4-202ENST00000459954 ANO2Q9NQ90 1003 aa7.39□□□□□ -1.23
UBQLN4-202ENST00000459954 BTG4Q9NY30 223 aa7.39□□□□□ -1.23
UBQLN4-202ENST00000459954 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.39□□□□□ -1.23
UBQLN4-202ENST00000459954 LRRFIP2Q9Y608 721 aaKnown RBP7.39□□□□□ -1.23
UBQLN4-202ENST00000459954 BCL9LQ86UU0 1499 aa7.38□□□□□ -1.23
UBQLN4-202ENST00000459954 RPAP1Q9BWH6 1393 aaPredicted RBP7.38□□□□□ -1.23
UBQLN4-202ENST00000459954 HEG1Q9ULI3 1381 aa7.38□□□□□ -1.23
UBQLN4-202ENST00000459954 TRIM6-TRIM34B2RNG4 842 aa7.38□□□□□ -1.23
UBQLN4-202ENST00000459954 APBB1O00213 710 aa7.38□□□□□ -1.23
UBQLN4-202ENST00000459954 HIP1O00291 1037 aa7.38□□□□□ -1.23
UBQLN4-202ENST00000459954 GLRX3O76003 335 aaKnown RBP7.38□□□□□ -1.23
UBQLN4-202ENST00000459954 ZC3H6P61129 1189 aaKnown RBP7.38□□□□□ -1.23
UBQLN4-202ENST00000459954 HSP90AA2PQ14568 343 aaPredicted RBP7.38□□□□□ -1.23
UBQLN4-202ENST00000459954 HDGFL1Q5TGJ6 251 aa7.38□□□□□ -1.23
UBQLN4-202ENST00000459954 MTERF4Q7Z6M4 381 aaKnown RBP7.38□□□□□ -1.23
UBQLN4-202ENST00000459954 RHPN1Q8TCX5 695 aa7.38□□□□□ -1.23
UBQLN4-202ENST00000459954 CABLES1Q8TDN4 633 aa7.38□□□□□ -1.23
UBQLN4-202ENST00000459954 RILPL2Q969X0 211 aa7.38□□□□□ -1.23
UBQLN4-202ENST00000459954 ALDH8A1Q9H2A2 487 aaPredicted RBP7.38□□□□□ -1.23
UBQLN4-202ENST00000459954 PDCL3Q9H2J4 239 aa7.38□□□□□ -1.23
UBQLN4-202ENST00000459954 SH2B1Q9NRF2 756 aaPredicted RBP7.38□□□□□ -1.23
UBQLN4-202ENST00000459954 SNRKQ9NRH2 765 aa7.38□□□□□ -1.23
UBQLN4-202ENST00000459954 MIS18AQ9NYP9 233 aa7.38□□□□□ -1.23
UBQLN4-202ENST00000459954 LIMCH1Q9UPQ0 1083 aa7.38□□□□□ -1.23
UBQLN4-202ENST00000459954 ATRNO75882 1429 aa7.37□□□□□ -1.23
UBQLN4-202ENST00000459954 AFDNP55196 1824 aaKnown RBP7.37□□□□□ -1.23
UBQLN4-202ENST00000459954 EIF4A1P60842 406 aaKnown RBP7.37□□□□□ -1.23
UBQLN4-202ENST00000459954 AMOTQ4VCS5 1084 aa7.37□□□□□ -1.23
UBQLN4-202ENST00000459954 AKAP4Q5JQC9 854 aa7.37□□□□□ -1.23
UBQLN4-202ENST00000459954 CCDC183Q5T5S1 534 aa7.37□□□□□ -1.23
UBQLN4-202ENST00000459954 BEND3Q5T5X7 828 aa7.37□□□□□ -1.23
UBQLN4-202ENST00000459954 NUTM2GQ5VZR2 741 aa7.37□□□□□ -1.23
UBQLN4-202ENST00000459954 KIAA1211Q6ZU35 1233 aa7.37□□□□□ -1.23
UBQLN4-202ENST00000459954 PPP1R42Q7Z4L9 355 aa7.37□□□□□ -1.23
UBQLN4-202ENST00000459954 TICAM2Q86XR7 235 aa7.37□□□□□ -1.23
UBQLN4-202ENST00000459954 CCDC125Q86Z20 511 aa7.37□□□□□ -1.23
UBQLN4-202ENST00000459954 DNAAF4Q8WXU2 420 aa7.37□□□□□ -1.23
UBQLN4-202ENST00000459954 GPATCH3Q96I76 525 aa7.37□□□□□ -1.23
UBQLN4-202ENST00000459954 CARD10Q9BWT7 1032 aa7.37□□□□□ -1.23
UBQLN4-202ENST00000459954 LSG1Q9H089 658 aaKnown RBP7.37□□□□□ -1.23
UBQLN4-202ENST00000459954 PALD1Q9ULE6 856 aa7.37□□□□□ -1.23
UBQLN4-202ENST00000459954 COL14A1Q05707 1796 aaKnown RBP7.37□□□□□ -1.23
UBQLN4-202ENST00000459954 RGPD5Q99666 1765 aa7.37□□□□□ -1.23
UBQLN4-202ENST00000459954 NWD2Q9ULI1 1742 aa7.37□□□□□ -1.23
UBQLN4-202ENST00000459954 LRP6O75581 1613 aa7.37□□□□□ -1.23
UBQLN4-202ENST00000459954 LAMA4Q16363 1823 aa7.36□□□□□ -1.23
UBQLN4-202ENST00000459954 UTYO14607 1347 aa7.36□□□□□ -1.23
UBQLN4-202ENST00000459954 SPATA31A5Q5VU36 1347 aa7.36□□□□□ -1.23
UBQLN4-202ENST00000459954 SPATA31A7Q8IWB4 1347 aa7.36□□□□□ -1.23
UBQLN4-202ENST00000459954 WDR17Q8IZU2 1322 aa7.36□□□□□ -1.23
UBQLN4-202ENST00000459954 SURF6O75683 361 aaKnown RBP7.36□□□□□ -1.23
UBQLN4-202ENST00000459954 TPM3P06753 285 aa7.36□□□□□ -1.23
UBQLN4-202ENST00000459954 ZSCAN22P10073 491 aaPredicted RBP7.36□□□□□ -1.23
UBQLN4-202ENST00000459954 UBE2HP62256 183 aa7.36□□□□□ -1.23
UBQLN4-202ENST00000459954 VPS53Q5VIR6 699 aa7.36□□□□□ -1.23
UBQLN4-202ENST00000459954 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.36□□□□□ -1.23
UBQLN4-202ENST00000459954 RGS17Q9UGC6 210 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms