RNA–Protein interactions for RNA: ENST00000459894.6

SFXN2-202, Transcript of sideroflexin 2, humanhuman

TSL 2

Gene SFXN2, Length 2,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-202ENST00000459894 EID1Q9Y6B2 187 aa17.19■□□□□ 0.34
SFXN2-202ENST00000459894 HMGN5P82970 282 aaKnown RBP17.19■□□□□ 0.34
SFXN2-202ENST00000459894 DNTTIP2Q5QJE6 756 aaKnown RBP17.19■□□□□ 0.34
SFXN2-202ENST00000459894 TCHHQ07283 1943 aa17.18■□□□□ 0.34
SFXN2-202ENST00000459894 ANKARQ7Z5J8 1434 aa17.18■□□□□ 0.34
SFXN2-202ENST00000459894 FIBPO43427 364 aa17.18■□□□□ 0.34
SFXN2-202ENST00000459894 EIF4A1P60842 406 aaKnown RBP17.18■□□□□ 0.34
SFXN2-202ENST00000459894 SPG7Q9UQ90 795 aa17.18■□□□□ 0.34
SFXN2-202ENST00000459894 TBX22Q9Y458 520 aa17.18■□□□□ 0.34
SFXN2-202ENST00000459894 MED1Q15648 1581 aaPredicted RBP17.18■□□□□ 0.34
SFXN2-202ENST00000459894 PDIA4P13667 645 aaKnown RBP17.18■□□□□ 0.34
SFXN2-202ENST00000459894 GJB2P29033 226 aa17.18■□□□□ 0.34
SFXN2-202ENST00000459894 MTX1Q13505 466 aa17.18■□□□□ 0.34
SFXN2-202ENST00000459894 ZSWIM6Q9HCJ5 1215 aa17.18■□□□□ 0.34
SFXN2-202ENST00000459894 PDRG1Q9NUG6 133 aa17.18■□□□□ 0.34
SFXN2-202ENST00000459894 SPTLC3Q9NUV7 552 aa17.18■□□□□ 0.34
SFXN2-202ENST00000459894 MTMR6Q9Y217 621 aa17.17■□□□□ 0.34
SFXN2-202ENST00000459894 CYP46A1Q9Y6A2 500 aa17.17■□□□□ 0.34
SFXN2-202ENST00000459894 RGPD8O14715 1765 aaPredicted RBP17.17■□□□□ 0.34
SFXN2-202ENST00000459894 MARF1Q9Y4F3 1742 aaKnown RBP17.17■□□□□ 0.34
SFXN2-202ENST00000459894 LARGE1O95461 756 aa17.16■□□□□ 0.34
SFXN2-202ENST00000459894 EIF2S2P20042 333 aaKnown RBP17.16■□□□□ 0.34
SFXN2-202ENST00000459894 CCDC83Q8IWF9 413 aa17.16■□□□□ 0.34
SFXN2-202ENST00000459894 CLASRPQ8N2M8 674 aaKnown RBP17.16■□□□□ 0.34
SFXN2-202ENST00000459894 GPATCH3Q96I76 525 aa17.16■□□□□ 0.34
SFXN2-202ENST00000459894 PI4KAP2A4QPH2 592 aa17.16■□□□□ 0.34
SFXN2-202ENST00000459894 TPM3P06753 285 aa17.16■□□□□ 0.34
SFXN2-202ENST00000459894 GTF2F1P35269 517 aaKnown RBP eCLIP17.16■□□□□ 0.342e-8■□□□□ 9.3
SFXN2-202ENST00000459894 PI4KAP1Q8N8J0 262 aa17.16■□□□□ 0.34
SFXN2-202ENST00000459894 LARP6Q9BRS8 491 aaKnown RBP17.16■□□□□ 0.34
SFXN2-202ENST00000459894 CHPF2Q9P2E5 772 aa17.16■□□□□ 0.34
SFXN2-202ENST00000459894 OS9Q13438 667 aaPredicted RBP17.15■□□□□ 0.34
SFXN2-202ENST00000459894 JAKMIP1Q96N16 626 aaKnown RBP17.15■□□□□ 0.34
SFXN2-202ENST00000459894 ZNF830Q96NB3 372 aaPredicted RBP17.15■□□□□ 0.34
SFXN2-202ENST00000459894 TTC12Q9H892 705 aaPredicted RBP17.15■□□□□ 0.34
SFXN2-202ENST00000459894 ECHDC1Q9NTX5 307 aa17.15■□□□□ 0.34
SFXN2-202ENST00000459894 DNM1Q05193 864 aaKnown RBP17.15■□□□□ 0.34
SFXN2-202ENST00000459894 ERC1Q8IUD2 1116 aa17.15■□□□□ 0.34
SFXN2-202ENST00000459894 SLIT1O75093 1534 aa17.14■□□□□ 0.33
SFXN2-202ENST00000459894 CPA1P15085 419 aa17.14■□□□□ 0.33
SFXN2-202ENST00000459894 PTH1RQ03431 593 aa17.14■□□□□ 0.33
SFXN2-202ENST00000459894 GIMAP6Q6P9H5 292 aa17.14■□□□□ 0.33
SFXN2-202ENST00000459894 LTV1Q96GA3 475 aaPredicted RBP17.14■□□□□ 0.33
SFXN2-202ENST00000459894 HDAC5Q9UQL6 1122 aa17.14■□□□□ 0.33
SFXN2-202ENST00000459894 PRPF40BQ6NWY9 871 aaKnown RBP17.14■□□□□ 0.33
SFXN2-202ENST00000459894 EVI5LQ96CN4 794 aa17.14■□□□□ 0.33
SFXN2-202ENST00000459894 KDM3BQ7LBC6 1761 aa17.14■□□□□ 0.33
SFXN2-202ENST00000459894 ZKSCAN1P17029 563 aaPredicted RBP17.13■□□□□ 0.33
SFXN2-202ENST00000459894 NECTIN1Q15223 517 aa17.13■□□□□ 0.33
SFXN2-202ENST00000459894 ADCK5Q3MIX3 580 aa17.13■□□□□ 0.33
SFXN2-202ENST00000459894 ADCY9O60503 1353 aa17.13■□□□□ 0.33
SFXN2-202ENST00000459894 ARHGAP23Q9P227 1491 aa17.13■□□□□ 0.33
SFXN2-202ENST00000459894 HIP1O00291 1037 aa17.12■□□□□ 0.33
SFXN2-202ENST00000459894 ALDH1L1O75891 902 aa17.12■□□□□ 0.33
SFXN2-202ENST00000459894 IFIT2P09913 472 aaKnown RBP17.12■□□□□ 0.33
SFXN2-202ENST00000459894 CCDC192P0DO97 292 aa17.12■□□□□ 0.33
SFXN2-202ENST00000459894 MPNDQ8N594 471 aa17.12■□□□□ 0.33
SFXN2-202ENST00000459894 ABTB2Q8N961 1025 aa17.12■□□□□ 0.33
SFXN2-202ENST00000459894 CCDC171Q6TFL3 1326 aa17.12■□□□□ 0.33
SFXN2-202ENST00000459894 NUTM2GQ5VZR2 741 aa17.12■□□□□ 0.33
SFXN2-202ENST00000459894 ST3GAL1Q11201 340 aa17.11■□□□□ 0.33
SFXN2-202ENST00000459894 ME3Q16798 604 aa17.11■□□□□ 0.33
SFXN2-202ENST00000459894 TPRNQ4KMQ1 711 aa17.11■□□□□ 0.33
SFXN2-202ENST00000459894 USHBP1Q8N6Y0 703 aa17.11■□□□□ 0.33
SFXN2-202ENST00000459894 GOLGA6L6A8MZA4 724 aa17.1■□□□□ 0.33
SFXN2-202ENST00000459894 PSMA5P28066 241 aa17.1■□□□□ 0.33
SFXN2-202ENST00000459894 DBF4Q9UBU7 674 aaPredicted RBP17.1■□□□□ 0.33
SFXN2-202ENST00000459894 FER1L4A9Z1Z3 1794 aa17.1■□□□□ 0.33
SFXN2-202ENST00000459894 ELP1O95163 1332 aa17.1■□□□□ 0.33
SFXN2-202ENST00000459894 CHD2O14647 1828 aaKnown RBP17.1■□□□□ 0.33
SFXN2-202ENST00000459894 VPS37CA5D8V6 355 aaPredicted RBP17.1■□□□□ 0.33
SFXN2-202ENST00000459894 KRT85P78386 507 aa17.1■□□□□ 0.33
SFXN2-202ENST00000459894 PLPPR3Q6T4P5 718 aa17.1■□□□□ 0.33
SFXN2-202ENST00000459894 CCDC94Q9BW85 323 aaPredicted RBP17.1■□□□□ 0.33
SFXN2-202ENST00000459894 LGR6Q9HBX8 967 aa17.1■□□□□ 0.33
SFXN2-202ENST00000459894 SNRKQ9NRH2 765 aa17.1■□□□□ 0.33
SFXN2-202ENST00000459894 PDCP20941 246 aa17.09■□□□□ 0.33
SFXN2-202ENST00000459894 CREB3L3Q68CJ9 461 aa17.09■□□□□ 0.33
SFXN2-202ENST00000459894 KIAA1524Q8TCG1 905 aa17.09■□□□□ 0.33
SFXN2-202ENST00000459894 IP6K1Q92551 441 aa17.09■□□□□ 0.33
SFXN2-202ENST00000459894 MAP4K1Q92918 833 aa17.09■□□□□ 0.33
SFXN2-202ENST00000459894 RBM8AQ9Y5S9 174 aaKnown RBP17.09■□□□□ 0.33
SFXN2-202ENST00000459894 LARP1BQ659C4 914 aaKnown RBP17.09■□□□□ 0.33
SFXN2-202ENST00000459894 SMAP1Q8IYB5 467 aaPredicted RBP17.09■□□□□ 0.33
SFXN2-202ENST00000459894 C9orf78Q9NZ63 289 aaPredicted RBP17.09■□□□□ 0.33
SFXN2-202ENST00000459894 BTBD11A6QL63 1104 aa17.08■□□□□ 0.33
SFXN2-202ENST00000459894 AP5Z1O43299 807 aa17.08■□□□□ 0.33
SFXN2-202ENST00000459894 PLCB2Q00722 1185 aa17.08■□□□□ 0.33
SFXN2-202ENST00000459894 ANKRD1Q15327 319 aa17.08■□□□□ 0.33
SFXN2-202ENST00000459894 ALDH8A1Q9H2A2 487 aaPredicted RBP17.08■□□□□ 0.33
SFXN2-202ENST00000459894 TPCN1Q9ULQ1 816 aa17.08■□□□□ 0.33
SFXN2-202ENST00000459894 TEFQ10587 303 aa17.08■□□□□ 0.32
SFXN2-202ENST00000459894 AKAP4Q5JQC9 854 aa17.08■□□□□ 0.32
SFXN2-202ENST00000459894 C17orf53Q8N3J3 647 aaPredicted RBP17.08■□□□□ 0.32
SFXN2-202ENST00000459894 FAM200AQ8TCP9 573 aa17.08■□□□□ 0.32
SFXN2-202ENST00000459894 KIF3AQ9Y496 699 aa17.08■□□□□ 0.32
SFXN2-202ENST00000459894 ADGRL3Q9HAR2 1447 aa17.08■□□□□ 0.32
SFXN2-202ENST00000459894 KCNQ3O43525 872 aa17.07■□□□□ 0.32
SFXN2-202ENST00000459894 CEBPAP49715 358 aaPredicted RBP17.07■□□□□ 0.32
SFXN2-202ENST00000459894 MAP3K11Q16584 847 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 610.2 ms