RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 ZNF500O60304 480 aaPredicted RBP17.03■□□□□ 0.32
SCFD1-203ENST00000458591 ESCO1Q5FWF5 840 aa17.03■□□□□ 0.32
SCFD1-203ENST00000458591 KLHDC4Q8TBB5 520 aa17.03■□□□□ 0.32
SCFD1-203ENST00000458591 TCEANC2Q96MN5 208 aa17.03■□□□□ 0.32
SCFD1-203ENST00000458591 CCDC8Q9H0W5 538 aaPredicted RBP17.03■□□□□ 0.32
SCFD1-203ENST00000458591 DIAPH3Q9NSV4 1193 aa17.03■□□□□ 0.32
SCFD1-203ENST00000458591 HYPKQ9NX55 129 aa17.03■□□□□ 0.32
SCFD1-203ENST00000458591 FAM227BQ96M60 508 aa17.02■□□□□ 0.32
SCFD1-203ENST00000458591 TLR7Q9NYK1 1049 aaKnown RBP17.02■□□□□ 0.32
SCFD1-203ENST00000458591 USP25Q9UHP3 1055 aa17.02■□□□□ 0.32
SCFD1-203ENST00000458591 SMC3Q9UQE7 1217 aa17.02■□□□□ 0.31
SCFD1-203ENST00000458591 TAF6LQ9Y6J9 622 aa17.02■□□□□ 0.31
SCFD1-203ENST00000458591 PTMAP06454 111 aaKnown RBP17.01■□□□□ 0.31
SCFD1-203ENST00000458591 HCLS1P14317 486 aaPredicted RBP17.01■□□□□ 0.31
SCFD1-203ENST00000458591 GJB2P29033 226 aa17.01■□□□□ 0.31
SCFD1-203ENST00000458591 DNM1Q05193 864 aaKnown RBP17.01■□□□□ 0.31
SCFD1-203ENST00000458591 PSME1Q06323 249 aa17.01■□□□□ 0.31
SCFD1-203ENST00000458591 LMOD2Q6P5Q4 547 aa17.01■□□□□ 0.31
SCFD1-203ENST00000458591 AACSQ86V21 672 aa17.01■□□□□ 0.31
SCFD1-203ENST00000458591 JARID2Q92833 1246 aaPredicted RBP17.01■□□□□ 0.31
SCFD1-203ENST00000458591 SIL1Q9H173 461 aa17.01■□□□□ 0.31
SCFD1-203ENST00000458591 SLIT1O75093 1534 aa17.01■□□□□ 0.31
SCFD1-203ENST00000458591 CLASRPQ8N2M8 674 aaKnown RBP17.01■□□□□ 0.31
SCFD1-203ENST00000458591 C17orf53Q8N3J3 647 aaPredicted RBP17.01■□□□□ 0.31
SCFD1-203ENST00000458591 KAZALD1Q96I82 304 aa17.01■□□□□ 0.31
SCFD1-203ENST00000458591 SUCLG2Q96I99 432 aa17.01■□□□□ 0.31
SCFD1-203ENST00000458591 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.01■□□□□ 0.31
SCFD1-203ENST00000458591 RNMTO43148 476 aaKnown RBP17■□□□□ 0.31
SCFD1-203ENST00000458591 GLRX3O76003 335 aaKnown RBP17■□□□□ 0.31
SCFD1-203ENST00000458591 F13A1P00488 732 aa17■□□□□ 0.31
SCFD1-203ENST00000458591 TERF1P54274 439 aa17■□□□□ 0.31
SCFD1-203ENST00000458591 FAM173BQ6P4H8 233 aa17■□□□□ 0.31
SCFD1-203ENST00000458591 GIMAP6Q6P9H5 292 aa17■□□□□ 0.31
SCFD1-203ENST00000458591 PDRG1Q9NUG6 133 aa17■□□□□ 0.31
SCFD1-203ENST00000458591 CCDC39Q9UFE4 941 aa17■□□□□ 0.31
SCFD1-203ENST00000458591 PXDNQ92626 1479 aa17■□□□□ 0.31
SCFD1-203ENST00000458591 SASH1O94885 1247 aa17■□□□□ 0.31
SCFD1-203ENST00000458591 ECHDC1Q9NTX5 307 aa17■□□□□ 0.31
SCFD1-203ENST00000458591 TCHHQ07283 1943 aa17■□□□□ 0.31
SCFD1-203ENST00000458591 IFIT2P09913 472 aaKnown RBP16.99■□□□□ 0.31
SCFD1-203ENST00000458591 ME3Q16798 604 aa16.99■□□□□ 0.31
SCFD1-203ENST00000458591 AKAP4Q5JQC9 854 aa16.99■□□□□ 0.31
SCFD1-203ENST00000458591 SYAP1Q96A49 352 aaPredicted RBP16.99■□□□□ 0.31
SCFD1-203ENST00000458591 EAF2Q96CJ1 260 aaPredicted RBP16.99■□□□□ 0.31
SCFD1-203ENST00000458591 GIGYF1O75420 1035 aaPredicted RBP16.99■□□□□ 0.31
SCFD1-203ENST00000458591 DBF4Q9UBU7 674 aaPredicted RBP16.99■□□□□ 0.31
SCFD1-203ENST00000458591 CHMP3Q9Y3E7 222 aa16.99■□□□□ 0.31
SCFD1-203ENST00000458591 ANKARQ7Z5J8 1434 aa16.98■□□□□ 0.31
SCFD1-203ENST00000458591 PIP4K2AP48426 406 aaPredicted RBP16.98■□□□□ 0.31
SCFD1-203ENST00000458591 NMIQ13287 307 aaPredicted RBP16.98■□□□□ 0.31
SCFD1-203ENST00000458591 EDC3Q96F86 508 aaKnown RBP16.98■□□□□ 0.31
SCFD1-203ENST00000458591 ORAI2Q96SN7 254 aa16.98■□□□□ 0.31
SCFD1-203ENST00000458591 BICC1Q9H694 974 aaKnown RBP16.98■□□□□ 0.31
SCFD1-203ENST00000458591 MTMR6Q9Y217 621 aa16.98■□□□□ 0.31
SCFD1-203ENST00000458591 VPS37CA5D8V6 355 aaPredicted RBP16.97■□□□□ 0.31
SCFD1-203ENST00000458591 CHGBP05060 677 aa16.97■□□□□ 0.31
SCFD1-203ENST00000458591 PLCB2Q00722 1185 aa16.97■□□□□ 0.31
SCFD1-203ENST00000458591 SLC39A6Q13433 755 aa16.97■□□□□ 0.31
SCFD1-203ENST00000458591 FERMT3Q86UX7 667 aa16.97■□□□□ 0.31
SCFD1-203ENST00000458591 BOLA2Q9H3K6 86 aa16.97■□□□□ 0.31
SCFD1-203ENST00000458591 FAM13BQ9NYF5 915 aa16.97■□□□□ 0.31
SCFD1-203ENST00000458591 AXIN2Q9Y2T1 843 aa16.97■□□□□ 0.31
SCFD1-203ENST00000458591 TTC41PQ6P2S7 1318 aa16.97■□□□□ 0.31
SCFD1-203ENST00000458591 USP42Q9H9J4 1324 aaKnown RBP16.97■□□□□ 0.31
SCFD1-203ENST00000458591 UQCRHLA0A096LP55 91 aa16.97■□□□□ 0.31
SCFD1-203ENST00000458591 UQCRHP07919 91 aa16.97■□□□□ 0.31
SCFD1-203ENST00000458591 PLEKHO1Q53GL0 409 aaPredicted RBP16.97■□□□□ 0.31
SCFD1-203ENST00000458591 CCDC183Q5T5S1 534 aa16.97■□□□□ 0.31
SCFD1-203ENST00000458591 KSR2Q6VAB6 950 aa16.97■□□□□ 0.31
SCFD1-203ENST00000458591 ARID3AQ99856 593 aa16.97■□□□□ 0.31
SCFD1-203ENST00000458591 TTC12Q9H892 705 aaPredicted RBP16.97■□□□□ 0.31
SCFD1-203ENST00000458591 TPCN1Q9ULQ1 816 aa16.97■□□□□ 0.31
SCFD1-203ENST00000458591 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.97■□□□□ 0.31
SCFD1-203ENST00000458591 RBM8AQ9Y5S9 174 aaKnown RBP16.97■□□□□ 0.31
SCFD1-203ENST00000458591 NDUFB9Q9Y6M9 179 aa16.97■□□□□ 0.31
SCFD1-203ENST00000458591 AP5Z1O43299 807 aa16.96■□□□□ 0.31
SCFD1-203ENST00000458591 NECTIN1Q15223 517 aa16.96■□□□□ 0.31
SCFD1-203ENST00000458591 HSP90AB4PQ58FF6 505 aa16.96■□□□□ 0.31
SCFD1-203ENST00000458591 VSIG10Q8N0Z9 540 aa16.96■□□□□ 0.31
SCFD1-203ENST00000458591 TMEM87AQ8NBN3 555 aa16.96■□□□□ 0.31
SCFD1-203ENST00000458591 PDCL3Q9H2J4 239 aa16.96■□□□□ 0.31
SCFD1-203ENST00000458591 RGPD2P0DJD1 1756 aa16.96■□□□□ 0.31
SCFD1-203ENST00000458591 EPB41L2O43491 1005 aaKnown RBP16.96■□□□□ 0.31
SCFD1-203ENST00000458591 ZSWIM6Q9HCJ5 1215 aa16.96■□□□□ 0.31
SCFD1-203ENST00000458591 A0A0D9SFI3 127 aa16.95■□□□□ 0.3
SCFD1-203ENST00000458591 ADCY5O95622 1261 aa16.95■□□□□ 0.3
SCFD1-203ENST00000458591 MYL6BP14649 208 aa16.95■□□□□ 0.3
SCFD1-203ENST00000458591 MTX1Q13505 466 aa16.95■□□□□ 0.3
SCFD1-203ENST00000458591 CREB3L3Q68CJ9 461 aa16.95■□□□□ 0.3
SCFD1-203ENST00000458591 HOXB7P09629 217 aa16.95■□□□□ 0.3
SCFD1-203ENST00000458591 KCNJ4P48050 445 aa16.95■□□□□ 0.3
SCFD1-203ENST00000458591 C1orf141Q5JVX7 400 aa16.95■□□□□ 0.3
SCFD1-203ENST00000458591 CYP46A1Q9Y6A2 500 aa16.95■□□□□ 0.3
SCFD1-203ENST00000458591 LTN1O94822 1766 aa16.94■□□□□ 0.3
SCFD1-203ENST00000458591 CCDC171Q6TFL3 1326 aa16.94■□□□□ 0.3
SCFD1-203ENST00000458591 MCM5P33992 734 aa16.94■□□□□ 0.3
SCFD1-203ENST00000458591 UBE2HP62256 183 aa16.94■□□□□ 0.3
SCFD1-203ENST00000458591 EPHA10Q5JZY3 1008 aa16.94■□□□□ 0.3
SCFD1-203ENST00000458591 ANKRD24Q8TF21 1146 aa16.94■□□□□ 0.3
SCFD1-203ENST00000458591 MED1Q15648 1581 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms