RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 PRIM1P49642 420 aaKnown RBP11.4□□□□□ -0.58
VPS50-207ENST00000458530 IFNL2Q8IZJ0 200 aa11.4□□□□□ -0.58
VPS50-207ENST00000458530 DNAJC5GQ8N7S2 189 aa11.4□□□□□ -0.58
VPS50-207ENST00000458530 CRBNQ96SW2 442 aa11.4□□□□□ -0.58
VPS50-207ENST00000458530 CHMP4BQ9H444 224 aaKnown RBP11.4□□□□□ -0.58
VPS50-207ENST00000458530 DOT1LQ8TEK3 1739 aa11.4□□□□□ -0.58
VPS50-207ENST00000458530 N4BP2Q86UW6 1770 aaPredicted RBP11.39□□□□□ -0.59
VPS50-207ENST00000458530 POTEB2H3BUK9 544 aa11.39□□□□□ -0.59
VPS50-207ENST00000458530 RNMTO43148 476 aaKnown RBP11.39□□□□□ -0.59
VPS50-207ENST00000458530 VAMP4O75379 141 aa11.39□□□□□ -0.59
VPS50-207ENST00000458530 IL17REQ8NFR9 667 aa11.39□□□□□ -0.59
VPS50-207ENST00000458530 EXOC6Q8TAG9 804 aa11.39□□□□□ -0.59
VPS50-207ENST00000458530 SSH1Q8WYL5 1049 aa11.39□□□□□ -0.59
VPS50-207ENST00000458530 ARHGAP45Q92619 1136 aa11.39□□□□□ -0.59
VPS50-207ENST00000458530 KAT6BQ8WYB5 2073 aa11.39□□□□□ -0.59
VPS50-207ENST00000458530 HOXB7P09629 217 aa11.38□□□□□ -0.59
VPS50-207ENST00000458530 ATF7IPQ6VMQ6 1270 aa11.38□□□□□ -0.59
VPS50-207ENST00000458530 DZIP1LQ8IYY4 767 aaKnown RBP11.38□□□□□ -0.59
VPS50-207ENST00000458530 BCL2L13Q9BXK5 485 aa11.38□□□□□ -0.59
VPS50-207ENST00000458530 CCNL1Q9UK58 526 aaPredicted RBP11.38□□□□□ -0.59
VPS50-207ENST00000458530 LAMB4A4D0S4 1761 aa11.37□□□□□ -0.59
VPS50-207ENST00000458530 PHKG2P15735 406 aa11.37□□□□□ -0.59
VPS50-207ENST00000458530 DDX54Q8TDD1 881 aaKnown RBP11.37□□□□□ -0.59
VPS50-207ENST00000458530 SPOCK2Q92563 424 aa11.37□□□□□ -0.59
VPS50-207ENST00000458530 DCAF5Q96JK2 942 aa11.37□□□□□ -0.59
VPS50-207ENST00000458530 STK31Q9BXU1 1019 aa11.37□□□□□ -0.59
VPS50-207ENST00000458530 API5Q9BZZ5 524 aaKnown RBP11.37□□□□□ -0.59
VPS50-207ENST00000458530 METRNQ9UJH8 293 aa11.37□□□□□ -0.59
VPS50-207ENST00000458530 C5P01031 1676 aa11.36□□□□□ -0.59
VPS50-207ENST00000458530 TOGARAM1Q9Y4F4 1720 aa11.36□□□□□ -0.59
VPS50-207ENST00000458530 TTLL13PA6NNM8 815 aa11.36□□□□□ -0.59
VPS50-207ENST00000458530 BTBD11A6QL63 1104 aa11.36□□□□□ -0.59
VPS50-207ENST00000458530 CCDC30Q5VVM6 783 aa11.36□□□□□ -0.59
VPS50-207ENST00000458530 MPRIPQ6WCQ1 1025 aa11.36□□□□□ -0.59
VPS50-207ENST00000458530 C8orf58Q8NAV2 365 aa11.36□□□□□ -0.59
VPS50-207ENST00000458530 ZCRB1Q8TBF4 217 aaKnown RBP11.36□□□□□ -0.59
VPS50-207ENST00000458530 PTPRCP08575 1304 aa11.35□□□□□ -0.59
VPS50-207ENST00000458530 TIE1P35590 1138 aa11.35□□□□□ -0.59
VPS50-207ENST00000458530 APLP1P51693 650 aa11.35□□□□□ -0.59
VPS50-207ENST00000458530 MVPQ14764 893 aaKnown RBP11.35□□□□□ -0.59
VPS50-207ENST00000458530 C20orf194Q5TEA3 1177 aa11.35□□□□□ -0.59
VPS50-207ENST00000458530 MSL1Q68DK7 614 aa11.35□□□□□ -0.59
VPS50-207ENST00000458530 B4GALNT3Q6L9W6 998 aa11.35□□□□□ -0.59
VPS50-207ENST00000458530 MRPL50Q8N5N7 158 aaKnown RBP11.35□□□□□ -0.59
VPS50-207ENST00000458530 TSPYL6Q8N831 410 aa11.35□□□□□ -0.59
VPS50-207ENST00000458530 FLAD1Q8NFF5 587 aa11.35□□□□□ -0.59
VPS50-207ENST00000458530 NOB1Q9ULX3 412 aaKnown RBP11.35□□□□□ -0.59
VPS50-207ENST00000458530 DDX19BQ9UMR2 479 aa11.35□□□□□ -0.59
VPS50-207ENST00000458530 PCDHB8Q9UN66 801 aa11.35□□□□□ -0.59
VPS50-207ENST00000458530 TAF1LQ8IZX4 1826 aa11.35□□□□□ -0.59
VPS50-207ENST00000458530 KDM6AO15550 1401 aaPredicted RBP11.35□□□□□ -0.59
VPS50-207ENST00000458530 UBR2Q8IWV8 1755 aa11.34□□□□□ -0.59
VPS50-207ENST00000458530 ELL2O00472 640 aaPredicted RBP11.34□□□□□ -0.59
VPS50-207ENST00000458530 TRIM27P14373 513 aa11.34□□□□□ -0.59
VPS50-207ENST00000458530 AMIGO3Q86WK7 504 aa11.34□□□□□ -0.59
VPS50-207ENST00000458530 SYTL4Q96C24 671 aaPredicted RBP11.34□□□□□ -0.59
VPS50-207ENST00000458530 ITGB4P16144 1822 aa11.33□□□□□ -0.6
VPS50-207ENST00000458530 GSE1Q14687 1217 aa11.33□□□□□ -0.6
VPS50-207ENST00000458530 PANK1Q8TE04 598 aa11.33□□□□□ -0.6
VPS50-207ENST00000458530 CLUAP1Q96AJ1 413 aa11.33□□□□□ -0.6
VPS50-207ENST00000458530 SLC52A2Q9HAB3 445 aa11.33□□□□□ -0.6
VPS50-207ENST00000458530 LGR6Q9HBX8 967 aa11.33□□□□□ -0.6
VPS50-207ENST00000458530 CIZ1Q9ULV3 898 aaPredicted RBP11.33□□□□□ -0.6
VPS50-207ENST00000458530 COG6Q9Y2V7 657 aa11.33□□□□□ -0.6
VPS50-207ENST00000458530 ERVV-2B6SEH9 535 aa11.32□□□□□ -0.6
VPS50-207ENST00000458530 HMGB2P26583 209 aaKnown RBP11.32□□□□□ -0.6
VPS50-207ENST00000458530 ITPRIPQ8IWB1 547 aa11.32□□□□□ -0.6
VPS50-207ENST00000458530 TTC5Q8N0Z6 440 aa11.32□□□□□ -0.6
VPS50-207ENST00000458530 ZNF526Q8TF50 670 aaPredicted RBP11.32□□□□□ -0.6
VPS50-207ENST00000458530 SLC39A7Q92504 469 aa11.32□□□□□ -0.6
VPS50-207ENST00000458530 MIS18AQ9NYP9 233 aa11.32□□□□□ -0.6
VPS50-207ENST00000458530 C4BP0C0L5 1744 aa11.32□□□□□ -0.6
VPS50-207ENST00000458530 UBR3Q6ZT12 1888 aa11.32□□□□□ -0.6
VPS50-207ENST00000458530 PXDNLA1KZ92 1463 aa11.32□□□□□ -0.6
VPS50-207ENST00000458530 CYP27B1O15528 508 aa11.31□□□□□ -0.6
VPS50-207ENST00000458530 TOMM70O94826 608 aa11.31□□□□□ -0.6
VPS50-207ENST00000458530 CABP4P57796 275 aa11.31□□□□□ -0.6
VPS50-207ENST00000458530 EIF4A1P60842 406 aaKnown RBP11.31□□□□□ -0.6
VPS50-207ENST00000458530 NKX1-1Q15270 411 aaPredicted RBP11.31□□□□□ -0.6
VPS50-207ENST00000458530 HDGFL1Q5TGJ6 251 aa11.31□□□□□ -0.6
VPS50-207ENST00000458530 CENPQQ7L2Z9 268 aaPredicted RBP11.31□□□□□ -0.6
VPS50-207ENST00000458530 JMYQ8N9B5 988 aa11.31□□□□□ -0.6
VPS50-207ENST00000458530 KIAA1551Q9HCM1 1747 aa11.31□□□□□ -0.6
VPS50-207ENST00000458530 ABCC4O15439 1325 aa11.31□□□□□ -0.6
VPS50-207ENST00000458530 PALLDQ8WX93 1383 aa11.3□□□□□ -0.6
VPS50-207ENST00000458530 KIF13BQ9NQT8 1826 aa11.3□□□□□ -0.6
VPS50-207ENST00000458530 C7P10643 843 aa11.29□□□□□ -0.6
VPS50-207ENST00000458530 RLBP1P12271 317 aa11.29□□□□□ -0.6
VPS50-207ENST00000458530 KRT24Q2M2I5 525 aa11.29□□□□□ -0.6
VPS50-207ENST00000458530 TMEM106CQ9BVX2 250 aa11.29□□□□□ -0.6
VPS50-207ENST00000458530 HEG1Q9ULI3 1381 aa11.28□□□□□ -0.6
VPS50-207ENST00000458530 POTEFA5A3E0 1075 aa11.28□□□□□ -0.6
VPS50-207ENST00000458530 ZNF790Q6PG37 636 aa11.28□□□□□ -0.6
VPS50-207ENST00000458530 TMEM57Q8N5G2 664 aa11.28□□□□□ -0.6
VPS50-207ENST00000458530 FMNL2Q96PY5 1086 aa11.28□□□□□ -0.6
VPS50-207ENST00000458530 WDR90Q96KV7 1748 aa11.28□□□□□ -0.6
VPS50-207ENST00000458530 SSFA2P28290 1259 aa11.27□□□□□ -0.61
VPS50-207ENST00000458530 CCT4P50991 539 aaKnown RBP11.27□□□□□ -0.61
VPS50-207ENST00000458530 COL13A1Q5TAT6 717 aaPredicted RBP11.27□□□□□ -0.61
VPS50-207ENST00000458530 NFATC2IPQ8NCF5 419 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms