RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 RGPD5Q99666 1765 aa24.97■■□□□ 1.59
CRAT-207ENST00000458362 LARP6Q9BRS8 491 aaKnown RBP24.96■■□□□ 1.59
CRAT-207ENST00000458362 AK2P54819 239 aa24.96■■□□□ 1.59
CRAT-207ENST00000458362 CLASRPQ8N2M8 674 aaKnown RBP24.96■■□□□ 1.59
CRAT-207ENST00000458362 TRPM3Q9HCF6 1732 aaPredicted RBP24.95■■□□□ 1.59
CRAT-207ENST00000458362 RUFY3Q7L099 469 aa24.95■■□□□ 1.58
CRAT-207ENST00000458362 CPA1P15085 419 aa24.95■■□□□ 1.58
CRAT-207ENST00000458362 KIAA1211Q6ZU35 1233 aa24.95■■□□□ 1.58
CRAT-207ENST00000458362 GDPD2Q9HCC8 539 aa24.95■■□□□ 1.58
CRAT-207ENST00000458362 TCHHQ07283 1943 aa24.94■■□□□ 1.58
CRAT-207ENST00000458362 PTH1RQ03431 593 aa24.94■■□□□ 1.58
CRAT-207ENST00000458362 KAZALD1Q96I82 304 aa24.94■■□□□ 1.58
CRAT-207ENST00000458362 ECHDC1Q9NTX5 307 aa24.94■■□□□ 1.58
CRAT-207ENST00000458362 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.94■■□□□ 1.58
CRAT-207ENST00000458362 WDR33Q9C0J8 1336 aaKnown RBP24.94■■□□□ 1.58
CRAT-207ENST00000458362 SUCLG2Q96I99 432 aa24.93■■□□□ 1.58
CRAT-207ENST00000458362 DIAPH3Q9NSV4 1193 aa24.93■■□□□ 1.58
CRAT-207ENST00000458362 ADAMTS7Q9UKP4 1686 aa24.93■■□□□ 1.58
CRAT-207ENST00000458362 GADD45BO75293 160 aaPredicted RBP24.93■■□□□ 1.58
CRAT-207ENST00000458362 ZSCAN30Q86W11 494 aa24.92■■□□□ 1.58
CRAT-207ENST00000458362 PDLIM2Q96JY6 352 aa24.92■■□□□ 1.58
CRAT-207ENST00000458362 HYPKQ9NX55 129 aa24.92■■□□□ 1.58
CRAT-207ENST00000458362 IFIT2P09913 472 aaKnown RBP24.91■■□□□ 1.58
CRAT-207ENST00000458362 PDIA6Q15084 440 aa24.91■■□□□ 1.58
CRAT-207ENST00000458362 NPHP4O75161 1426 aaPredicted RBP24.91■■□□□ 1.58
CRAT-207ENST00000458362 AIMP1Q12904 312 aaKnown RBP24.91■■□□□ 1.58
CRAT-207ENST00000458362 USP48Q86UV5 1035 aa24.91■■□□□ 1.58
CRAT-207ENST00000458362 AACSQ86V21 672 aa24.91■■□□□ 1.58
CRAT-207ENST00000458362 LINS1Q8NG48 757 aa24.91■■□□□ 1.58
CRAT-207ENST00000458362 LIMCH1Q9UPQ0 1083 aa24.91■■□□□ 1.58
CRAT-207ENST00000458362 ADAMTSL3P82987 1691 aa24.9■■□□□ 1.58
CRAT-207ENST00000458362 GRM8O00222 908 aa24.9■■□□□ 1.58
CRAT-207ENST00000458362 TRHP20396 242 aaPredicted RBP24.9■■□□□ 1.58
CRAT-207ENST00000458362 ERC1Q8IUD2 1116 aa24.9■■□□□ 1.58
CRAT-207ENST00000458362 BICC1Q9H694 974 aaKnown RBP24.9■■□□□ 1.58
CRAT-207ENST00000458362 LARGE1O95461 756 aa24.89■■□□□ 1.58
CRAT-207ENST00000458362 CASTP20810 708 aaKnown RBP24.89■■□□□ 1.58
CRAT-207ENST00000458362 DDX21Q9NR30 783 aaKnown RBP eCLIP24.89■■□□□ 1.58
CRAT-207ENST00000458362 UTYO14607 1347 aa24.89■■□□□ 1.58
CRAT-207ENST00000458362 C5P01031 1676 aa24.89■■□□□ 1.58
CRAT-207ENST00000458362 SASH1O94885 1247 aa24.89■■□□□ 1.57
CRAT-207ENST00000458362 KRT28Q7Z3Y7 464 aa24.89■■□□□ 1.57
CRAT-207ENST00000458362 RUFY2Q8WXA3 655 aa24.89■■□□□ 1.57
CRAT-207ENST00000458362 ADCK5Q3MIX3 580 aa24.88■■□□□ 1.57
CRAT-207ENST00000458362 LMTK3Q96Q04 1460 aa24.88■■□□□ 1.57
CRAT-207ENST00000458362 GPATCH3Q96I76 525 aa24.88■■□□□ 1.57
CRAT-207ENST00000458362 SLC39A6Q13433 755 aa24.87■■□□□ 1.57
CRAT-207ENST00000458362 PRPF40BQ6NWY9 871 aaKnown RBP24.87■■□□□ 1.57
CRAT-207ENST00000458362 IGKV5-2P06315 115 aa24.87■■□□□ 1.57
CRAT-207ENST00000458362 EAF2Q96CJ1 260 aaPredicted RBP24.87■■□□□ 1.57
CRAT-207ENST00000458362 ZSCAN22P10073 491 aaPredicted RBP24.86■■□□□ 1.57
CRAT-207ENST00000458362 EVI5LQ96CN4 794 aa24.86■■□□□ 1.57
CRAT-207ENST00000458362 HDAC5Q9UQL6 1122 aa24.86■■□□□ 1.57
CRAT-207ENST00000458362 DTNBO60941 627 aa24.86■■□□□ 1.57
CRAT-207ENST00000458362 RNF214Q8ND24 703 aa24.86■■□□□ 1.57
CRAT-207ENST00000458362 KCNB2Q92953 911 aa24.86■■□□□ 1.57
CRAT-207ENST00000458362 JAKMIP1Q96N16 626 aaKnown RBP24.86■■□□□ 1.57
CRAT-207ENST00000458362 TLR7Q9NYK1 1049 aaKnown RBP24.86■■□□□ 1.57
CRAT-207ENST00000458362 MST1RQ04912 1400 aa24.85■■□□□ 1.57
CRAT-207ENST00000458362 ERBB3P21860 1342 aa24.85■■□□□ 1.57
CRAT-207ENST00000458362 DDX58O95786 925 aaKnown RBP24.85■■□□□ 1.57
CRAT-207ENST00000458362 SYT1P21579 422 aa24.85■■□□□ 1.57
CRAT-207ENST00000458362 ZC3H6P61129 1189 aaKnown RBP24.85■■□□□ 1.57
CRAT-207ENST00000458362 CCDC8Q9H0W5 538 aaPredicted RBP24.85■■□□□ 1.57
CRAT-207ENST00000458362 CNPY2Q9Y2B0 182 aa24.85■■□□□ 1.57
CRAT-207ENST00000458362 SCN11AQ9UI33 1791 aa24.84■■□□□ 1.57
CRAT-207ENST00000458362 KDM6AO15550 1401 aaPredicted RBP24.84■■□□□ 1.57
CRAT-207ENST00000458362 HS1BP3Q53T59 392 aa24.84■■□□□ 1.57
CRAT-207ENST00000458362 TMEM87AQ8NBN3 555 aa24.84■■□□□ 1.57
CRAT-207ENST00000458362 DDX54Q8TDD1 881 aaKnown RBP24.84■■□□□ 1.57
CRAT-207ENST00000458362 FAM227BQ96M60 508 aa24.84■■□□□ 1.57
CRAT-207ENST00000458362 PDRG1Q9NUG6 133 aa24.84■■□□□ 1.57
CRAT-207ENST00000458362 CCDC171Q6TFL3 1326 aa24.83■■□□□ 1.57
CRAT-207ENST00000458362 STX6O43752 255 aa24.83■■□□□ 1.57
CRAT-207ENST00000458362 G3BP1Q13283 466 aaKnown RBP eCLIP24.83■■□□□ 1.577e-7■■□□□ 14
CRAT-207ENST00000458362 TSPY26PQ9H489 355 aa24.83■■□□□ 1.57
CRAT-207ENST00000458362 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.83■■□□□ 1.57
CRAT-207ENST00000458362 SMC3Q9UQE7 1217 aa24.83■■□□□ 1.57
CRAT-207ENST00000458362 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.83■■□□□ 1.57
CRAT-207ENST00000458362 NECTIN1Q15223 517 aa24.83■■□□□ 1.57
CRAT-207ENST00000458362 ZNF790Q6PG37 636 aa24.83■■□□□ 1.57
CRAT-207ENST00000458362 SIL1Q9H173 461 aa24.83■■□□□ 1.57
CRAT-207ENST00000458362 ZSWIM6Q9HCJ5 1215 aa24.83■■□□□ 1.57
CRAT-207ENST00000458362 MYL6BP14649 208 aa24.82■■□□□ 1.56
CRAT-207ENST00000458362 NMIQ13287 307 aaPredicted RBP24.82■■□□□ 1.56
CRAT-207ENST00000458362 RIC3Q7Z5B4 369 aa24.82■■□□□ 1.56
CRAT-207ENST00000458362 CCDC83Q8IWF9 413 aa24.82■■□□□ 1.56
CRAT-207ENST00000458362 KLHDC4Q8TBB5 520 aa24.82■■□□□ 1.56
CRAT-207ENST00000458362 SYAP1Q96A49 352 aaPredicted RBP24.82■■□□□ 1.56
CRAT-207ENST00000458362 VPS53Q5VIR6 699 aa24.82■■□□□ 1.56
CRAT-207ENST00000458362 C1orf167Q5SNV9 1468 aa24.81■■□□□ 1.56
CRAT-207ENST00000458362 ST3GAL1Q11201 340 aa24.81■■□□□ 1.56
CRAT-207ENST00000458362 TM6SF1Q9BZW5 370 aa24.81■■□□□ 1.56
CRAT-207ENST00000458362 RBM8AQ9Y5S9 174 aaKnown RBP24.81■■□□□ 1.56
CRAT-207ENST00000458362 ALS2Q96Q42 1657 aa24.81■■□□□ 1.56
CRAT-207ENST00000458362 MSNP26038 577 aaKnown RBP24.81■■□□□ 1.56
CRAT-207ENST00000458362 EPHA10Q5JZY3 1008 aa24.81■■□□□ 1.56
CRAT-207ENST00000458362 SLC52A2Q9HAB3 445 aa24.81■■□□□ 1.56
CRAT-207ENST00000458362 KIF1AQ12756 1690 aa24.8■■□□□ 1.56
CRAT-207ENST00000458362 NEURL1BA8MQ27 555 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms