RNA–Protein interactions for RNA: ENST00000458153.5

MKLN1-206, Transcript of muskelin 1, human

TSL 2

Gene MKLN1, Length 2,448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MKLN1-206	ENST00000458153	CANX	P27824	592 aa	Known RBP	12.38	□□□□□ -0.43
MKLN1-206	ENST00000458153	IL6ST	P40189	918 aa	Predicted RBP	12.38	□□□□□ -0.43
MKLN1-206	ENST00000458153	PNMA8A	Q86V59	439 aa	Predicted RBP	12.38	□□□□□ -0.43
MKLN1-206	ENST00000458153	MORC1	Q86VD1	984 aa		12.38	□□□□□ -0.43
MKLN1-206	ENST00000458153	TIMELESS	Q9UNS1	1208 aa		12.38	□□□□□ -0.43
MKLN1-206	ENST00000458153	FKBP4	Q02790	459 aa	Known RBP eCLIP	12.38	□□□□□ -0.43
MKLN1-206	ENST00000458153	BICDL1	Q6ZP65	573 aa		12.38	□□□□□ -0.43
MKLN1-206	ENST00000458153	C7orf43	Q8WVR3	580 aa		12.38	□□□□□ -0.43
MKLN1-206	ENST00000458153	WDR33	Q9C0J8	1336 aa	Known RBP	12.37	□□□□□ -0.43
MKLN1-206	ENST00000458153	DEFB115	Q30KQ5	88 aa		12.37	□□□□□ -0.43
MKLN1-206	ENST00000458153	TTC5	Q8N0Z6	440 aa		12.37	□□□□□ -0.43
MKLN1-206	ENST00000458153	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.37	□□□□□ -0.43
MKLN1-206	ENST00000458153	ZNF541	Q9H0D2	1346 aa		12.37	□□□□□ -0.43
MKLN1-206	ENST00000458153	CAMTA2	O94983	1202 aa		12.36	□□□□□ -0.43
MKLN1-206	ENST00000458153	EPHX2	P34913	555 aa		12.36	□□□□□ -0.43
MKLN1-206	ENST00000458153	MLLT1	Q03111	559 aa	Predicted RBP	12.36	□□□□□ -0.43
MKLN1-206	ENST00000458153	NPR1	P16066	1061 aa		12.36	□□□□□ -0.43
MKLN1-206	ENST00000458153	SETDB2	Q96T68	719 aa		12.36	□□□□□ -0.43
MKLN1-206	ENST00000458153	SNED1	Q8TER0	1413 aa		12.35	□□□□□ -0.43
MKLN1-206	ENST00000458153	KLRG2	A4D1S0	409 aa	Predicted RBP	12.35	□□□□□ -0.43
MKLN1-206	ENST00000458153	PANK3	Q9H999	370 aa		12.35	□□□□□ -0.43
MKLN1-206	ENST00000458153	ECE1	P42892	770 aa		12.35	□□□□□ -0.43
MKLN1-206	ENST00000458153	RTKN2	Q8IZC4	609 aa		12.35	□□□□□ -0.43
MKLN1-206	ENST00000458153	FZD9	O00144	591 aa		12.34	□□□□□ -0.43
MKLN1-206	ENST00000458153	EAPP	Q56P03	285 aa	Predicted RBP	12.34	□□□□□ -0.43
MKLN1-206	ENST00000458153	LAMB4	A4D0S4	1761 aa		12.34	□□□□□ -0.43
MKLN1-206	ENST00000458153	MTHFSD	Q2M296	383 aa	Known RBP	12.33	□□□□□ -0.43
MKLN1-206	ENST00000458153	CNTROB	Q8N137	903 aa		12.33	□□□□□ -0.43
MKLN1-206	ENST00000458153	CLEC4G	Q6UXB4	293 aa		12.33	□□□□□ -0.44
MKLN1-206	ENST00000458153	GPC2	Q8N158	579 aa		12.33	□□□□□ -0.44
MKLN1-206	ENST00000458153	RIC1	Q4ADV7	1423 aa		12.33	□□□□□ -0.44
MKLN1-206	ENST00000458153	ZNF496	Q96IT1	587 aa	Predicted RBP	12.32	□□□□□ -0.44
MKLN1-206	ENST00000458153	COL3A1	P02461	1466 aa	Predicted RBP	12.32	□□□□□ -0.44
MKLN1-206	ENST00000458153	NPHP1	O15259	732 aa		12.32	□□□□□ -0.44
MKLN1-206	ENST00000458153	IARS	P41252	1262 aa	Known RBP	12.32	□□□□□ -0.44
MKLN1-206	ENST00000458153	ZNF790	Q6PG37	636 aa		12.32	□□□□□ -0.44
MKLN1-206	ENST00000458153	FMNL2	Q96PY5	1086 aa		12.32	□□□□□ -0.44
MKLN1-206	ENST00000458153	TBC1D2B	Q9UPU7	963 aa		12.32	□□□□□ -0.44
MKLN1-206	ENST00000458153	CLEC11A	Q9Y240	323 aa		12.32	□□□□□ -0.44
MKLN1-206	ENST00000458153	ZNF652	Q9Y2D9	606 aa		12.32	□□□□□ -0.44
MKLN1-206	ENST00000458153	CA12	O43570	354 aa		12.31	□□□□□ -0.44
MKLN1-206	ENST00000458153	PSMD1	Q99460	953 aa		12.31	□□□□□ -0.44
MKLN1-206	ENST00000458153	DDX21	Q9NR30	783 aa	Known RBP eCLIP	12.31	□□□□□ -0.44
MKLN1-206	ENST00000458153	ABT1	Q9ULW3	272 aa	Known RBP	12.31	□□□□□ -0.44
MKLN1-206	ENST00000458153	NPM2	Q86SE8	214 aa	Known RBP	12.31	□□□□□ -0.44
MKLN1-206	ENST00000458153	CCDC24	Q8N4L8	307 aa		12.31	□□□□□ -0.44
MKLN1-206	ENST00000458153	CAPNS2	Q96L46	248 aa		12.31	□□□□□ -0.44
MKLN1-206	ENST00000458153	BEGAIN	Q9BUH8	593 aa		12.31	□□□□□ -0.44
MKLN1-206	ENST00000458153	CEMIP	Q8WUJ3	1361 aa		12.31	□□□□□ -0.44
MKLN1-206	ENST00000458153	GRIPAP1	Q4V328	841 aa		12.3	□□□□□ -0.44
MKLN1-206	ENST00000458153	DZIP3	Q86Y13	1208 aa	Known RBP	12.3	□□□□□ -0.44
MKLN1-206	ENST00000458153	GAS2L2	Q8NHY3	880 aa		12.3	□□□□□ -0.44
MKLN1-206	ENST00000458153	ZNF277	Q9NRM2	450 aa	Predicted RBP	12.3	□□□□□ -0.44
MKLN1-206	ENST00000458153	TEF	Q10587	303 aa		12.3	□□□□□ -0.44
MKLN1-206	ENST00000458153	MAP1S	Q66K74	1059 aa	Predicted RBP	12.3	□□□□□ -0.44
MKLN1-206	ENST00000458153	CC2D2B	Q6DHV5	1058 aa		12.3	□□□□□ -0.44
MKLN1-206	ENST00000458153	NBPF5P	Q86XG9	351 aa	Predicted RBP	12.3	□□□□□ -0.44
MKLN1-206	ENST00000458153	POLR3GL	Q9BT43	218 aa		12.3	□□□□□ -0.44
MKLN1-206	ENST00000458153	RNF123	Q5XPI4	1314 aa		12.29	□□□□□ -0.44
MKLN1-206	ENST00000458153	MAP2K2	P36507	400 aa		12.29	□□□□□ -0.44
MKLN1-206	ENST00000458153	KNSTRN	Q9Y448	316 aa		12.29	□□□□□ -0.44
MKLN1-206	ENST00000458153	TLL2	Q9Y6L7	1015 aa		12.29	□□□□□ -0.44
MKLN1-206	ENST00000458153	HMOX1	P09601	288 aa		12.29	□□□□□ -0.44
MKLN1-206	ENST00000458153	HHIPL1	Q96JK4	782 aa		12.29	□□□□□ -0.44
MKLN1-206	ENST00000458153	COL4A5	P29400	1685 aa		12.29	□□□□□ -0.44
MKLN1-206	ENST00000458153	IBTK	Q9P2D0	1353 aa	Predicted RBP	12.29	□□□□□ -0.44
MKLN1-206	ENST00000458153	CCDC85C	A6NKD9	419 aa		12.28	□□□□□ -0.44
MKLN1-206	ENST00000458153	LMOD1	P29536	600 aa	Predicted RBP	12.28	□□□□□ -0.44
MKLN1-206	ENST00000458153	ALDH1B1	P30837	517 aa		12.28	□□□□□ -0.44
MKLN1-206	ENST00000458153	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.28	□□□□□ -0.44
MKLN1-206	ENST00000458153	SYNE4	Q8N205	404 aa		12.28	□□□□□ -0.44
MKLN1-206	ENST00000458153	GNAT3	A8MTJ3	354 aa		12.28	□□□□□ -0.44
MKLN1-206	ENST00000458153	DIAPH1	O60610	1272 aa	Known RBP	12.28	□□□□□ -0.44
MKLN1-206	ENST00000458153	USP50	Q70EL3	339 aa	Predicted RBP	12.28	□□□□□ -0.44
MKLN1-206	ENST00000458153	A1BG	P04217	495 aa		12.27	□□□□□ -0.44
MKLN1-206	ENST00000458153	EIF6	P56537	245 aa	Known RBP	12.27	□□□□□ -0.44
MKLN1-206	ENST00000458153	EIF4G2	P78344	907 aa	Known RBP eCLIP	12.27	□□□□□ -0.44
MKLN1-206	ENST00000458153	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.27	□□□□□ -0.44
MKLN1-206	ENST00000458153	CLSPN	Q9HAW4	1339 aa		12.27	□□□□□ -0.45
MKLN1-206	ENST00000458153	TPTE2	Q6XPS3	522 aa		12.27	□□□□□ -0.45
MKLN1-206	ENST00000458153	IL17RE	Q8NFR9	667 aa		12.27	□□□□□ -0.45
MKLN1-206	ENST00000458153	JDP2	Q8WYK2	163 aa		12.27	□□□□□ -0.45
MKLN1-206	ENST00000458153	NUP98	P52948	1817 aa		12.26	□□□□□ -0.45
MKLN1-206	ENST00000458153	GPR101	Q96P66	508 aa	Predicted RBP	12.26	□□□□□ -0.45
MKLN1-206	ENST00000458153	CRY2	Q49AN0	593 aa		12.26	□□□□□ -0.45
MKLN1-206	ENST00000458153	BRPF1	P55201	1214 aa	Predicted RBP	12.25	□□□□□ -0.45
MKLN1-206	ENST00000458153	KIF7	Q2M1P5	1343 aa		12.25	□□□□□ -0.45
MKLN1-206	ENST00000458153	HSPA5	P11021	654 aa	Known RBP	12.25	□□□□□ -0.45
MKLN1-206	ENST00000458153	MCOLN1	Q9GZU1	580 aa		12.25	□□□□□ -0.45
MKLN1-206	ENST00000458153	SCNN1D	P51172	638 aa		12.24	□□□□□ -0.45
MKLN1-206	ENST00000458153	CYP4F22	Q6NT55	531 aa		12.24	□□□□□ -0.45
MKLN1-206	ENST00000458153	VPS33B	Q9H267	617 aa		12.24	□□□□□ -0.45
MKLN1-206	ENST00000458153	CDHR2	Q9BYE9	1310 aa		12.24	□□□□□ -0.45
MKLN1-206	ENST00000458153	NPC1L1	Q9UHC9	1359 aa		12.24	□□□□□ -0.45
MKLN1-206	ENST00000458153	NYX	Q9GZU5	481 aa		12.23	□□□□□ -0.45
MKLN1-206	ENST00000458153	NIP7	Q9Y221	180 aa	Known RBP eCLIP	12.23	□□□□□ -0.45
MKLN1-206	ENST00000458153	CST9	Q5W186	159 aa		12.23	□□□□□ -0.45
MKLN1-206	ENST00000458153	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.23	□□□□□ -0.45
MKLN1-206	ENST00000458153	CASP8AP2	Q9UKL3	1982 aa		12.23	□□□□□ -0.45
MKLN1-206	ENST00000458153	KDM3B	Q7LBC6	1761 aa		12.23	□□□□□ -0.45

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