RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 TSR1Q2NL82 804 aaKnown RBP14.33□□□□□ -0.12
SYNE2-207ENST00000458046 G2E3Q7L622 706 aa14.33□□□□□ -0.12
SYNE2-207ENST00000458046 NUTM2AQ8IVF1 878 aaPredicted RBP14.33□□□□□ -0.12
SYNE2-207ENST00000458046 USP26Q9BXU7 913 aa14.33□□□□□ -0.12
SYNE2-207ENST00000458046 KRI1Q8N9T8 703 aaKnown RBP14.32□□□□□ -0.12
SYNE2-207ENST00000458046 KNDC1Q76NI1 1749 aa14.32□□□□□ -0.12
SYNE2-207ENST00000458046 RTL1A6NKG5 1358 aa14.32□□□□□ -0.12
SYNE2-207ENST00000458046 SLC26A8Q96RN1 970 aa14.32□□□□□ -0.12
SYNE2-207ENST00000458046 ATP10DQ9P241 1426 aa14.32□□□□□ -0.12
SYNE2-207ENST00000458046 KIF4AO95239 1232 aa14.31□□□□□ -0.12
SYNE2-207ENST00000458046 RABEP1Q15276 862 aa14.31□□□□□ -0.12
SYNE2-207ENST00000458046 MTHFSDQ2M296 383 aaKnown RBP14.31□□□□□ -0.12
SYNE2-207ENST00000458046 ARHGEF1Q92888 912 aaKnown RBP14.31□□□□□ -0.12
SYNE2-207ENST00000458046 TSPYL4Q9UJ04 414 aa14.31□□□□□ -0.12
SYNE2-207ENST00000458046 PTPRCP08575 1304 aa14.31□□□□□ -0.12
SYNE2-207ENST00000458046 RTF1Q92541 710 aaKnown RBP14.3□□□□□ -0.12
SYNE2-207ENST00000458046 C8orf37Q96NL8 207 aa14.3□□□□□ -0.12
SYNE2-207ENST00000458046 GABBR1Q9UBS5 961 aa14.3□□□□□ -0.12
SYNE2-207ENST00000458046 ERCC3P19447 782 aa14.3□□□□□ -0.12
SYNE2-207ENST00000458046 SKOR2Q2VWA4 1001 aaPredicted RBP14.3□□□□□ -0.12
SYNE2-207ENST00000458046 MAP3K19Q56UN5 1328 aa14.3□□□□□ -0.12
SYNE2-207ENST00000458046 LTKP29376 864 aa14.29□□□□□ -0.12
SYNE2-207ENST00000458046 DPH6Q7L8W6 267 aa14.29□□□□□ -0.12
SYNE2-207ENST00000458046 ZNF784Q8NCA9 323 aaPredicted RBP14.29□□□□□ -0.12
SYNE2-207ENST00000458046 TECPR2O15040 1411 aa14.29□□□□□ -0.12
SYNE2-207ENST00000458046 APLP1P51693 650 aa14.29□□□□□ -0.12
SYNE2-207ENST00000458046 KIAA0232Q92628 1395 aa14.29□□□□□ -0.12
SYNE2-207ENST00000458046 BAG4O95429 457 aaKnown RBP14.28□□□□□ -0.12
SYNE2-207ENST00000458046 NOM1Q5C9Z4 860 aaKnown RBP14.28□□□□□ -0.12
SYNE2-207ENST00000458046 CLEC4GQ6UXB4 293 aa14.28□□□□□ -0.12
SYNE2-207ENST00000458046 TNRQ92752 1358 aa14.28□□□□□ -0.12
SYNE2-207ENST00000458046 TMEM2Q9UHN6 1383 aa14.28□□□□□ -0.12
SYNE2-207ENST00000458046 MON2Q7Z3U7 1717 aa14.28□□□□□ -0.12
SYNE2-207ENST00000458046 CASC1Q6TDU7 716 aa14.28□□□□□ -0.12
SYNE2-207ENST00000458046 CCDC194A0A1B0GVG4 234 aa14.28□□□□□ -0.12
SYNE2-207ENST00000458046 GOLGA6L22H0YM25 854 aa14.28□□□□□ -0.12
SYNE2-207ENST00000458046 PKP1Q13835 747 aa14.28□□□□□ -0.12
SYNE2-207ENST00000458046 TSHZ3Q63HK5 1081 aa14.28□□□□□ -0.12
SYNE2-207ENST00000458046 UBA5Q9GZZ9 404 aa14.28□□□□□ -0.12
SYNE2-207ENST00000458046 DDX49Q9Y6V7 483 aaKnown RBP14.28□□□□□ -0.12
SYNE2-207ENST00000458046 CRB1P82279 1406 aa14.27□□□□□ -0.12
SYNE2-207ENST00000458046 EXOC6BQ9Y2D4 811 aa14.27□□□□□ -0.12
SYNE2-207ENST00000458046 MCTP1Q6DN14 999 aa14.27□□□□□ -0.13
SYNE2-207ENST00000458046 OVOS2A0A0J9YW53 1432 aa14.27□□□□□ -0.13
SYNE2-207ENST00000458046 OVOS2Q6IE36 1432 aa14.27□□□□□ -0.13
SYNE2-207ENST00000458046 DIP2AQ14689 1571 aa14.26□□□□□ -0.13
SYNE2-207ENST00000458046 STK25O00506 426 aa14.26□□□□□ -0.13
SYNE2-207ENST00000458046 HMMRO75330 724 aa14.26□□□□□ -0.13
SYNE2-207ENST00000458046 ZNF16P17020 682 aaPredicted RBP14.26□□□□□ -0.13
SYNE2-207ENST00000458046 USP6P35125 1406 aa14.26□□□□□ -0.13
SYNE2-207ENST00000458046 AMPHP49418 695 aa14.26□□□□□ -0.13
SYNE2-207ENST00000458046 CHD4Q14839 1912 aa14.26□□□□□ -0.13
SYNE2-207ENST00000458046 CLGNO14967 610 aa14.26□□□□□ -0.13
SYNE2-207ENST00000458046 ZGPATQ8N5A5 531 aaKnown RBP14.26□□□□□ -0.13
SYNE2-207ENST00000458046 NGDNQ8NEJ9 315 aaKnown RBP14.26□□□□□ -0.13
SYNE2-207ENST00000458046 EYA1Q99502 592 aa14.26□□□□□ -0.13
SYNE2-207ENST00000458046 THEMISQ8N1K5 641 aaPredicted RBP14.25□□□□□ -0.13
SYNE2-207ENST00000458046 SPOCK3Q9BQ16 436 aa14.25□□□□□ -0.13
SYNE2-207ENST00000458046 ISY1Q9ULR0 285 aaKnown RBP14.25□□□□□ -0.13
SYNE2-207ENST00000458046 ADAMTS13Q76LX8 1427 aa14.25□□□□□ -0.13
SYNE2-207ENST00000458046 SH3BP5O60239 455 aa14.25□□□□□ -0.13
SYNE2-207ENST00000458046 PDE1AP54750 535 aa14.25□□□□□ -0.13
SYNE2-207ENST00000458046 PSME1Q06323 249 aa14.25□□□□□ -0.13
SYNE2-207ENST00000458046 NUTM2GQ5VZR2 741 aa14.25□□□□□ -0.13
SYNE2-207ENST00000458046 ZNF622Q969S3 477 aaKnown RBP eCLIP14.25□□□□□ -0.13
SYNE2-207ENST00000458046 ITSN1Q15811 1721 aa14.24□□□□□ -0.13
SYNE2-207ENST00000458046 AKAP12Q02952 1782 aa14.24□□□□□ -0.13
SYNE2-207ENST00000458046 ERC2O15083 957 aa14.24□□□□□ -0.13
SYNE2-207ENST00000458046 ST18O60284 1047 aa14.24□□□□□ -0.13
SYNE2-207ENST00000458046 REC8O95072 547 aa14.24□□□□□ -0.13
SYNE2-207ENST00000458046 GNAI2P04899 355 aa14.24□□□□□ -0.13
SYNE2-207ENST00000458046 CCT4P50991 539 aaKnown RBP14.24□□□□□ -0.13
SYNE2-207ENST00000458046 CCDC96Q2M329 555 aa14.24□□□□□ -0.13
SYNE2-207ENST00000458046 LARGE2Q8N3Y3 721 aa14.24□□□□□ -0.13
SYNE2-207ENST00000458046 MAF1Q9H063 256 aa14.24□□□□□ -0.13
SYNE2-207ENST00000458046 AFF2P51816 1311 aa14.24□□□□□ -0.13
SYNE2-207ENST00000458046 RHBDL3P58872 404 aa14.23□□□□□ -0.13
SYNE2-207ENST00000458046 FKBP5Q13451 457 aaPredicted RBP14.23□□□□□ -0.13
SYNE2-207ENST00000458046 STK31Q9BXU1 1019 aa14.23□□□□□ -0.13
SYNE2-207ENST00000458046 SH3BP1Q9Y3L3 701 aa14.23□□□□□ -0.13
SYNE2-207ENST00000458046 CLCN1P35523 988 aa14.23□□□□□ -0.13
SYNE2-207ENST00000458046 NUCB2P80303 420 aa14.23□□□□□ -0.13
SYNE2-207ENST00000458046 CLEC17AQ6ZS10 378 aa14.23□□□□□ -0.13
SYNE2-207ENST00000458046 TRIM44Q96DX7 344 aaPredicted RBP14.23□□□□□ -0.13
SYNE2-207ENST00000458046 PEAK1Q9H792 1746 aa14.23□□□□□ -0.13
SYNE2-207ENST00000458046 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.23□□□□□ -0.13
SYNE2-207ENST00000458046 KLHL40Q2TBA0 621 aa14.22□□□□□ -0.13
SYNE2-207ENST00000458046 SDR16C5Q8N3Y7 309 aa14.22□□□□□ -0.13
SYNE2-207ENST00000458046 CHAMP1Q96JM3 812 aa14.22□□□□□ -0.13
SYNE2-207ENST00000458046 USP31Q70CQ4 1352 aa14.22□□□□□ -0.13
SYNE2-207ENST00000458046 NRKQ7Z2Y5 1582 aa14.22□□□□□ -0.13
SYNE2-207ENST00000458046 ERBB4Q15303 1308 aa14.22□□□□□ -0.13
SYNE2-207ENST00000458046 NAALADL2Q58DX5 795 aa14.22□□□□□ -0.13
SYNE2-207ENST00000458046 PNMA6EA0A0J9YXQ4 647 aa14.21□□□□□ -0.13
SYNE2-207ENST00000458046 LTV1Q96GA3 475 aaPredicted RBP14.21□□□□□ -0.13
SYNE2-207ENST00000458046 ARHGEF10O15013 1369 aa14.21□□□□□ -0.13
SYNE2-207ENST00000458046 AK9Q5TCS8 1911 aa14.21□□□□□ -0.13
SYNE2-207ENST00000458046 ESPNB1AK53 854 aa14.21□□□□□ -0.13
SYNE2-207ENST00000458046 NLRP6P59044 892 aa14.21□□□□□ -0.13
SYNE2-207ENST00000458046 CYP2E1P05181 493 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms