RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 C9orf78Q9NZ63 289 aaPredicted RBP3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 DBF4Q9UBU7 674 aaPredicted RBP3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 PALD1Q9ULE6 856 aa3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 KIF3AQ9Y496 699 aa3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 SNX14Q9Y5W7 946 aa3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 RPAP1Q9BWH6 1393 aaPredicted RBP3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 CHD2O14647 1828 aaKnown RBP3.98□□□□□ -1.77
HMGN1P18-201ENST00000457642 CCDC171Q6TFL3 1326 aa3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 KDM3BQ7LBC6 1761 aa3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 VPS37CA5D8V6 355 aaPredicted RBP3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 FIBPO43427 364 aa3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 CAVIN2O95810 425 aa3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 SYT1P21579 422 aa3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 AK2P54819 239 aa3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 NEXNQ0ZGT2 675 aa3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 MAP3K11Q16584 847 aa3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 PRPF40BQ6NWY9 871 aaKnown RBP3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 ZNF530Q6P9A1 599 aaPredicted RBP3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 CWC27Q6UX04 472 aaKnown RBP3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 ABTB2Q8N961 1025 aa3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 PI4K2BQ8TCG2 481 aa3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 PIBF1Q8WXW3 757 aa3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 IP6K1Q92551 441 aa3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 JAKMIP1Q96N16 626 aaKnown RBP3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 SLC26A8Q96RN1 970 aa3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 SCAND2PQ9GZW5 306 aaPredicted RBP3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 LSG1Q9H089 658 aaKnown RBP3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 USP44Q9H0E7 712 aa3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 HYPKQ9NX55 129 aa3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 FAM13BQ9NYF5 915 aa3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 HMG20BQ9P0W2 317 aa3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 USP25Q9UHP3 1055 aa3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 CNPY2Q9Y2B0 182 aa3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 CRYBG1Q9Y4K1 1723 aa3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 RFX7Q2KHR2 1363 aa3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 MED1Q15648 1581 aaPredicted RBP3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 LMO7Q8WWI1 1683 aa3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 FER1L4A9Z1Z3 1794 aa3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 LTN1O94822 1766 aa3.97□□□□□ -1.77
HMGN1P18-201ENST00000457642 KIF13AQ9H1H9 1805 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 ZBTB7CA1YPR0 619 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 PI4KAP2A4QPH2 592 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 BTBD11A6QL63 1104 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 KDM4AO75164 1064 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 GADD45BO75293 160 aaPredicted RBP3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 ADCY5O95622 1261 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 MAP4K4O95819 1239 aaPredicted RBP3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 GJB2P29033 226 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 LTKP29376 864 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 EIF4A1P60842 406 aaKnown RBP3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 PLCB2Q00722 1185 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 MTX1Q13505 466 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 FOXD4L6Q3SYB3 417 aaPredicted RBP3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 BEND3Q5T5X7 828 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 LARP1BQ659C4 914 aaKnown RBP3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 BLOC1S2Q6QNY1 142 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 KSR2Q6VAB6 950 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 FOXD4L3Q6VB84 417 aaPredicted RBP3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 RUFY3Q7L099 469 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 AACSQ86V21 672 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 CCDC83Q8IWF9 413 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 PI4KAP1Q8N8J0 262 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 IL17REQ8NFR9 667 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 MYRIPQ8NFW9 859 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 FAM200AQ8TCP9 573 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 TTC14Q96N46 770 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 FSD1Q9BTV5 496 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 NUP62CLQ9H1M0 184 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 PHAXQ9H814 394 aaKnown RBP3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 DDX19AQ9NUU7 478 aaKnown RBP3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 CHPF2Q9P2E5 772 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 PHF8Q9UPP1 1060 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 CEMIPQ8WUJ3 1361 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 NWD1Q149M9 1564 aa3.96□□□□□ -1.78
HMGN1P18-201ENST00000457642 ELP1O95163 1332 aa3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 RGPD8O14715 1765 aaPredicted RBP3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 LMTK3Q96Q04 1460 aa3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 H3BQV1 296 aa3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 NRDCO43847 1150 aa3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 NEMFO60524 1076 aa3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 HCLS1P14317 486 aaPredicted RBP3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 HSP90B1P14625 803 aaKnown RBP3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 FGD1P98174 961 aa3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 RBM10P98175 930 aaKnown RBP3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 PSME1Q06323 249 aa3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 DHX8Q14562 1220 aaKnown RBP3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 NOLC1Q14978 699 aaKnown RBP eCLIP3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 IFFO2Q5TF58 517 aa3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 NUTM2GQ5VZR2 741 aa3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 CREB3L3Q68CJ9 461 aa3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 LARP1Q6PKG0 1096 aaKnown RBP3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 UNC5CLQ8IV45 518 aa3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 DRC7Q8IY82 874 aa3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 USHBP1Q8N6Y0 703 aa3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 LINS1Q8NG48 757 aa3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 BICD2Q8TD16 824 aa3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 KCNB2Q92953 911 aa3.95□□□□□ -1.78
HMGN1P18-201ENST00000457642 PKNOX2Q96KN3 472 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms