RNA–Protein interactions for RNA: ENST00000456991.5

TMEM56-203, Transcript of transmembrane protein 56, humanhuman

TSL 3

Gene TMEM56, Length 992 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-203ENST00000456991 SOGA3Q5TF21 947 aa28.67■■■□□ 2.18
TMEM56-203ENST00000456991 MASTLQ96GX5 879 aa28.67■■■□□ 2.18
TMEM56-203ENST00000456991 PRPF40BQ6NWY9 871 aaKnown RBP28.66■■■□□ 2.18
TMEM56-203ENST00000456991 ZNF652Q9Y2D9 606 aa28.65■■■□□ 2.18
TMEM56-203ENST00000456991 PIP4K2AP48426 406 aaPredicted RBP28.64■■■□□ 2.18
TMEM56-203ENST00000456991 MCM10Q7L590 875 aa28.64■■■□□ 2.18
TMEM56-203ENST00000456991 NBPF5PQ86XG9 351 aaPredicted RBP28.64■■■□□ 2.18
TMEM56-203ENST00000456991 PCNTO95613 3336 aa28.64■■■□□ 2.17
TMEM56-203ENST00000456991 PRAMEF22A3QJZ6 481 aa28.63■■■□□ 2.17
TMEM56-203ENST00000456991 COL13A1Q5TAT6 717 aaPredicted RBP28.63■■■□□ 2.17
TMEM56-203ENST00000456991 SCN7AQ01118 1682 aa28.63■■■□□ 2.17
TMEM56-203ENST00000456991 SIPA1L3O60292 1781 aaPredicted RBP28.61■■■□□ 2.17
TMEM56-203ENST00000456991 HTATSF1O43719 755 aaKnown RBP28.61■■■□□ 2.17
TMEM56-203ENST00000456991 PPP2R1AP30153 589 aa28.61■■■□□ 2.17
TMEM56-203ENST00000456991 RGL2O15211 777 aa28.6■■■□□ 2.17
TMEM56-203ENST00000456991 TPTE2Q6XPS3 522 aa28.6■■■□□ 2.17
TMEM56-203ENST00000456991 ANKRD31Q8N7Z5 1873 aa28.59■■■□□ 2.17
TMEM56-203ENST00000456991 DDNO94850 711 aaPredicted RBP28.59■■■□□ 2.17
TMEM56-203ENST00000456991 NPR1P16066 1061 aa28.58■■■□□ 2.17
TMEM56-203ENST00000456991 DCTN1Q14203 1278 aa28.58■■■□□ 2.17
TMEM56-203ENST00000456991 C7orf43Q8WVR3 580 aa28.58■■■□□ 2.17
TMEM56-203ENST00000456991 NBPF26B4DH59 902 aa28.57■■■□□ 2.16
TMEM56-203ENST00000456991 CHADLQ6NUI6 762 aa28.57■■■□□ 2.16
TMEM56-203ENST00000456991 NBPF10Q6P3W6 841 aaKnown RBP28.57■■■□□ 2.16
TMEM56-203ENST00000456991 NBPF15Q8N660 670 aa28.57■■■□□ 2.16
TMEM56-203ENST00000456991 NIP7Q9Y221 180 aaKnown RBP eCLIP28.57■■■□□ 2.16
TMEM56-203ENST00000456991 KLRG2A4D1S0 409 aaPredicted RBP28.56■■■□□ 2.16
TMEM56-203ENST00000456991 TAF7Q15545 349 aaPredicted RBP28.56■■■□□ 2.16
TMEM56-203ENST00000456991 CCDC93Q567U6 631 aa28.56■■■□□ 2.16
TMEM56-203ENST00000456991 TIAM2Q8IVF5 1701 aa28.56■■■□□ 2.16
TMEM56-203ENST00000456991 IQCA1LA6NCM1 817 aa28.54■■■□□ 2.16
TMEM56-203ENST00000456991 COL11A2P13942 1736 aaPredicted RBP28.54■■■□□ 2.16
TMEM56-203ENST00000456991 HSPA1AP0DMV8 641 aaKnown RBP28.52■■■□□ 2.16
TMEM56-203ENST00000456991 HSPA1BP0DMV9 641 aaKnown RBP28.52■■■□□ 2.16
TMEM56-203ENST00000456991 TNS4Q8IZW8 715 aa28.52■■■□□ 2.16
TMEM56-203ENST00000456991 CREBZFQ9NS37 354 aa28.52■■■□□ 2.16
TMEM56-203ENST00000456991 FER1L6Q2WGJ9 1857 aa28.51■■■□□ 2.15
TMEM56-203ENST00000456991 FKBP4Q02790 459 aaKnown RBP eCLIP28.51■■■□□ 2.15
TMEM56-203ENST00000456991 CCDC88AQ3V6T2 1871 aa28.51■■■□□ 2.15
TMEM56-203ENST00000456991 SLX4Q8IY92 1834 aa28.5■■■□□ 2.15
TMEM56-203ENST00000456991 FAM177BA6PVY3 158 aa28.5■■■□□ 2.15
TMEM56-203ENST00000456991 NEFMP07197 916 aa28.5■■■□□ 2.15
TMEM56-203ENST00000456991 GTF2E1P29083 439 aaPredicted RBP28.5■■■□□ 2.15
TMEM56-203ENST00000456991 RTKN2Q8IZC4 609 aa28.5■■■□□ 2.15
TMEM56-203ENST00000456991 L3MBTL3Q96JM7 780 aaPredicted RBP28.5■■■□□ 2.15
TMEM56-203ENST00000456991 MIS18AQ9NYP9 233 aa28.5■■■□□ 2.15
TMEM56-203ENST00000456991 POTEIP0CG38 1075 aa28.49■■■□□ 2.15
TMEM56-203ENST00000456991 POTEJP0CG39 1038 aa28.49■■■□□ 2.15
TMEM56-203ENST00000456991 ALDH1B1P30837 517 aa28.49■■■□□ 2.15
TMEM56-203ENST00000456991 HLFQ16534 295 aa28.49■■■□□ 2.15
TMEM56-203ENST00000456991 LDHDQ86WU2 507 aa28.48■■■□□ 2.15
TMEM56-203ENST00000456991 PNISRQ8TF01 805 aaKnown RBP28.48■■■□□ 2.15
TMEM56-203ENST00000456991 ZNF277Q9NRM2 450 aaPredicted RBP28.48■■■□□ 2.15
TMEM56-203ENST00000456991 TAF1DQ9H5J8 278 aaPredicted RBP28.47■■■□□ 2.15
TMEM56-203ENST00000456991 BCORQ6W2J9 1755 aa28.47■■■□□ 2.15
TMEM56-203ENST00000456991 NYXQ9GZU5 481 aa28.45■■■□□ 2.14
TMEM56-203ENST00000456991 MKRN1Q9UHC7 482 aaKnown RBP28.45■■■□□ 2.14
TMEM56-203ENST00000456991 DICER1Q9UPY3 1922 aaKnown RBP28.44■■■□□ 2.14
TMEM56-203ENST00000456991 ERVV-1B6SEH8 477 aa28.44■■■□□ 2.14
TMEM56-203ENST00000456991 OLFM4Q6UX06 510 aa28.44■■■□□ 2.14
TMEM56-203ENST00000456991 NGEFQ8N5V2 710 aa28.44■■■□□ 2.14
TMEM56-203ENST00000456991 CAPN15O75808 1086 aa28.42■■■□□ 2.14
TMEM56-203ENST00000456991 SYNE4Q8N205 404 aa28.42■■■□□ 2.14
TMEM56-203ENST00000456991 HACL1Q9UJ83 578 aa28.41■■■□□ 2.14
TMEM56-203ENST00000456991 ZNF541Q9H0D2 1346 aa28.41■■■□□ 2.14
TMEM56-203ENST00000456991 IARSP41252 1262 aaKnown RBP28.4■■■□□ 2.14
TMEM56-203ENST00000456991 CRY2Q49AN0 593 aa28.4■■■□□ 2.14
TMEM56-203ENST00000456991 EAPPQ56P03 285 aaPredicted RBP28.4■■■□□ 2.14
TMEM56-203ENST00000456991 KIF6Q6ZMV9 814 aa28.4■■■□□ 2.14
TMEM56-203ENST00000456991 RRP7AQ9Y3A4 280 aaKnown RBP28.4■■■□□ 2.14
TMEM56-203ENST00000456991 MAP3K15Q6ZN16 1313 aa28.4■■■□□ 2.14
TMEM56-203ENST00000456991 PASKQ96RG2 1323 aa28.4■■■□□ 2.14
TMEM56-203ENST00000456991 FZD9O00144 591 aa28.39■■■□□ 2.14
TMEM56-203ENST00000456991 EIF4A1P60842 406 aaKnown RBP28.39■■■□□ 2.14
TMEM56-203ENST00000456991 CC2D2BQ6DHV5 1058 aa28.39■■■□□ 2.14
TMEM56-203ENST00000456991 NUTM1Q86Y26 1132 aa28.38■■■□□ 2.13
TMEM56-203ENST00000456991 PSMD1Q99460 953 aa28.38■■■□□ 2.13
TMEM56-203ENST00000456991 CLEC11AQ9Y240 323 aa28.38■■■□□ 2.13
TMEM56-203ENST00000456991 ARFGEF2Q9Y6D5 1785 aa28.37■■■□□ 2.13
TMEM56-203ENST00000456991 EPHX2P34913 555 aa28.37■■■□□ 2.13
TMEM56-203ENST00000456991 NFE2L2Q16236 605 aa28.37■■■□□ 2.13
TMEM56-203ENST00000456991 PNMA8AQ86V59 439 aaPredicted RBP28.37■■■□□ 2.13
TMEM56-203ENST00000456991 JDP2Q8WYK2 163 aa28.37■■■□□ 2.13
TMEM56-203ENST00000456991 PLEKHF1Q96S99 279 aa28.37■■■□□ 2.13
TMEM56-203ENST00000456991 TMEM88BA6NKF7 163 aa28.36■■■□□ 2.13
TMEM56-203ENST00000456991 ITGBL1O95965 494 aaPredicted RBP28.36■■■□□ 2.13
TMEM56-203ENST00000456991 TTLL7Q6ZT98 887 aa28.36■■■□□ 2.13
TMEM56-203ENST00000456991 PNNQ9H307 717 aaKnown RBP28.36■■■□□ 2.13
TMEM56-203ENST00000456991 CNTNAP1P78357 1384 aa28.36■■■□□ 2.13
TMEM56-203ENST00000456991 MYL6BP14649 208 aa28.35■■■□□ 2.13
TMEM56-203ENST00000456991 GPC2Q8N158 579 aa28.35■■■□□ 2.13
TMEM56-203ENST00000456991 RPGRQ92834 1020 aaKnown RBP28.35■■■□□ 2.13
TMEM56-203ENST00000456991 HOXA10P31260 410 aaPredicted RBP28.34■■■□□ 2.13
TMEM56-203ENST00000456991 GRIPAP1Q4V328 841 aa28.34■■■□□ 2.13
TMEM56-203ENST00000456991 THUMPD2Q9BTF0 503 aaKnown RBP28.34■■■□□ 2.13
TMEM56-203ENST00000456991 ABCC12Q96J65 1359 aa28.34■■■□□ 2.13
TMEM56-203ENST00000456991 GPTP24298 496 aa28.33■■■□□ 2.13
TMEM56-203ENST00000456991 ZBTB3Q9H5J0 574 aa28.33■■■□□ 2.13
TMEM56-203ENST00000456991 CACNA1SQ13698 1873 aa28.32■■■□□ 2.12
TMEM56-203ENST00000456991 SUSD4Q5VX71 490 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms