RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-208ENST00000456953 ST5P78524 1137 aa17.88■□□□□ 0.45
SNHG17-208ENST00000456953 ZNF330Q9Y3S2 320 aaPredicted RBP17.88■□□□□ 0.45
SNHG17-208ENST00000456953 ABHD8Q96I13 439 aa17.87■□□□□ 0.45
SNHG17-208ENST00000456953 ZNF496Q96IT1 587 aaPredicted RBP17.87■□□□□ 0.45
SNHG17-208ENST00000456953 CACNA1SQ13698 1873 aa17.86■□□□□ 0.45
SNHG17-208ENST00000456953 RASSF10A6NK89 507 aa17.86■□□□□ 0.45
SNHG17-208ENST00000456953 CCDC93Q567U6 631 aa17.86■□□□□ 0.45
SNHG17-208ENST00000456953 EAPPQ56P03 285 aaPredicted RBP17.86■□□□□ 0.45
SNHG17-208ENST00000456953 NPM2Q86SE8 214 aaKnown RBP17.86■□□□□ 0.45
SNHG17-208ENST00000456953 C7orf43Q8WVR3 580 aa17.86■□□□□ 0.45
SNHG17-208ENST00000456953 HACL1Q9UJ83 578 aa17.86■□□□□ 0.45
SNHG17-208ENST00000456953 KNSTRNQ9Y448 316 aa17.86■□□□□ 0.45
SNHG17-208ENST00000456953 HEG1Q9ULI3 1381 aa17.86■□□□□ 0.45
SNHG17-208ENST00000456953 CAMTA2O94983 1202 aa17.85■□□□□ 0.45
SNHG17-208ENST00000456953 HSPA8P11142 646 aaKnown RBP17.85■□□□□ 0.45
SNHG17-208ENST00000456953 MAP2K1Q02750 393 aaPredicted RBP17.85■□□□□ 0.45
SNHG17-208ENST00000456953 ZNF790Q6PG37 636 aa17.85■□□□□ 0.45
SNHG17-208ENST00000456953 ADAMTSL1Q8N6G6 1762 aa17.85■□□□□ 0.45
SNHG17-208ENST00000456953 ZNF541Q9H0D2 1346 aa17.84■□□□□ 0.45
SNHG17-208ENST00000456953 EPHX2P34913 555 aa17.84■□□□□ 0.45
SNHG17-208ENST00000456953 DEFB115Q30KQ5 88 aa17.84■□□□□ 0.45
SNHG17-208ENST00000456953 FAM161AQ3B820 660 aa17.84■□□□□ 0.45
SNHG17-208ENST00000456953 PNMA8AQ86V59 439 aaPredicted RBP17.84■□□□□ 0.45
SNHG17-208ENST00000456953 CLEC11AQ9Y240 323 aa17.84■□□□□ 0.45
SNHG17-208ENST00000456953 EIF4G2P78344 907 aaKnown RBP eCLIP17.83■□□□□ 0.443e-13■■■■□ 22.9
SNHG17-208ENST00000456953 FKBP4Q02790 459 aaKnown RBP eCLIP17.83■□□□□ 0.44
SNHG17-208ENST00000456953 TEFQ10587 303 aa17.83■□□□□ 0.44
SNHG17-208ENST00000456953 NPR1P16066 1061 aa17.82■□□□□ 0.44
SNHG17-208ENST00000456953 CNTROBQ8N137 903 aa17.82■□□□□ 0.44
SNHG17-208ENST00000456953 ZNF277Q9NRM2 450 aaPredicted RBP17.82■□□□□ 0.44
SNHG17-208ENST00000456953 BCORQ6W2J9 1755 aa17.81■□□□□ 0.44
SNHG17-208ENST00000456953 WDR33Q9C0J8 1336 aaKnown RBP17.81■□□□□ 0.44
SNHG17-208ENST00000456953 A1BGP04217 495 aa17.81■□□□□ 0.44
SNHG17-208ENST00000456953 NBPF5PQ86XG9 351 aaPredicted RBP17.81■□□□□ 0.44
SNHG17-208ENST00000456953 RTKN2Q8IZC4 609 aa17.81■□□□□ 0.44
SNHG17-208ENST00000456953 FMNL2Q96PY5 1086 aa17.81■□□□□ 0.44
SNHG17-208ENST00000456953 DIAPH1O60610 1272 aaKnown RBP17.8■□□□□ 0.44
SNHG17-208ENST00000456953 HSPA5P11021 654 aaKnown RBP17.8■□□□□ 0.44
SNHG17-208ENST00000456953 AMER1Q5JTC6 1135 aaPredicted RBP17.8■□□□□ 0.44
SNHG17-208ENST00000456953 MAP1SQ66K74 1059 aaPredicted RBP17.8■□□□□ 0.44
SNHG17-208ENST00000456953 DZIP3Q86Y13 1208 aaKnown RBP17.8■□□□□ 0.44
SNHG17-208ENST00000456953 IL17REQ8NFR9 667 aa17.8■□□□□ 0.44
SNHG17-208ENST00000456953 ABT1Q9ULW3 272 aaKnown RBP17.8■□□□□ 0.44
SNHG17-208ENST00000456953 SIPA1L3O60292 1781 aaPredicted RBP17.79■□□□□ 0.44
SNHG17-208ENST00000456953 RNF123Q5XPI4 1314 aa17.79■□□□□ 0.44
SNHG17-208ENST00000456953 KLRG2A4D1S0 409 aaPredicted RBP17.79■□□□□ 0.44
SNHG17-208ENST00000456953 CLEC4GQ6UXB4 293 aa17.79■□□□□ 0.44
SNHG17-208ENST00000456953 GPC2Q8N158 579 aa17.79■□□□□ 0.44
SNHG17-208ENST00000456953 CLSPNQ9HAW4 1339 aa17.78■□□□□ 0.44
SNHG17-208ENST00000456953 GNAT3A8MTJ3 354 aa17.78■□□□□ 0.44
SNHG17-208ENST00000456953 FZD9O00144 591 aa17.78■□□□□ 0.44
SNHG17-208ENST00000456953 ZNF652Q9Y2D9 606 aa17.78■□□□□ 0.44
SNHG17-208ENST00000456953 THSD7BQ9C0I4 1608 aa17.77■□□□□ 0.44
SNHG17-208ENST00000456953 MLLT1Q03111 559 aaPredicted RBP17.77■□□□□ 0.44
SNHG17-208ENST00000456953 GAS2L2Q8NHY3 880 aa17.77■□□□□ 0.44
SNHG17-208ENST00000456953 IARSP41252 1262 aaKnown RBP17.76■□□□□ 0.43
SNHG17-208ENST00000456953 RGS19P49795 217 aa17.76■□□□□ 0.43
SNHG17-208ENST00000456953 OLFM4Q6UX06 510 aa17.76■□□□□ 0.43
SNHG17-208ENST00000456953 TPTE2Q6XPS3 522 aa17.76■□□□□ 0.43
SNHG17-208ENST00000456953 BEGAINQ9BUH8 593 aa17.76■□□□□ 0.43
SNHG17-208ENST00000456953 DDX21Q9NR30 783 aaKnown RBP eCLIP17.76■□□□□ 0.43
SNHG17-208ENST00000456953 CCDC85CA6NKD9 419 aa17.75■□□□□ 0.43
SNHG17-208ENST00000456953 ECE1P42892 770 aa17.75■□□□□ 0.43
SNHG17-208ENST00000456953 SYNE4Q8N205 404 aa17.75■□□□□ 0.43
SNHG17-208ENST00000456953 PCDH10Q9P2E7 1040 aa17.75■□□□□ 0.43
SNHG17-208ENST00000456953 RGL2O15211 777 aa17.74■□□□□ 0.43
SNHG17-208ENST00000456953 ALDH1B1P30837 517 aa17.74■□□□□ 0.43
SNHG17-208ENST00000456953 JDP2Q8WYK2 163 aa17.74■□□□□ 0.43
SNHG17-208ENST00000456953 CAPNS2Q96L46 248 aa17.74■□□□□ 0.43
SNHG17-208ENST00000456953 CEMIPQ8WUJ3 1361 aa17.74■□□□□ 0.43
SNHG17-208ENST00000456953 PSMD1Q99460 953 aa17.73■□□□□ 0.43
SNHG17-208ENST00000456953 TNRC18O15417 2968 aaPredicted RBP17.73■□□□□ 0.43
SNHG17-208ENST00000456953 BTBD11A6QL63 1104 aa17.72■□□□□ 0.43
SNHG17-208ENST00000456953 LMOD1P29536 600 aaPredicted RBP17.72■□□□□ 0.43
SNHG17-208ENST00000456953 PAXIP1Q6ZW49 1069 aaPredicted RBP17.72■□□□□ 0.43
SNHG17-208ENST00000456953 GPR101Q96P66 508 aaPredicted RBP17.72■□□□□ 0.43
SNHG17-208ENST00000456953 NIP7Q9Y221 180 aaKnown RBP eCLIP17.72■□□□□ 0.43
SNHG17-208ENST00000456953 USP16Q9Y5T5 823 aa17.72■□□□□ 0.43
SNHG17-208ENST00000456953 KCNQ3O43525 872 aa17.71■□□□□ 0.43
SNHG17-208ENST00000456953 PIP4K2AP48426 406 aaPredicted RBP17.71■□□□□ 0.43
SNHG17-208ENST00000456953 EIF6P56537 245 aaKnown RBP17.71■□□□□ 0.43
SNHG17-208ENST00000456953 SNED1Q8TER0 1413 aa17.71■□□□□ 0.43
SNHG17-208ENST00000456953 CC2D2BQ6DHV5 1058 aa17.7■□□□□ 0.42
SNHG17-208ENST00000456953 GJA3Q9Y6H8 435 aa17.7■□□□□ 0.42
SNHG17-208ENST00000456953 COL3A1P02461 1466 aaPredicted RBP17.69■□□□□ 0.42
SNHG17-208ENST00000456953 U2SURPO15042 1029 aaKnown RBP17.69■□□□□ 0.42
SNHG17-208ENST00000456953 SNRPA1P09661 255 aaKnown RBP17.69■□□□□ 0.42
SNHG17-208ENST00000456953 CYP4F22Q6NT55 531 aa17.69■□□□□ 0.42
SNHG17-208ENST00000456953 LTBP1Q14766 1721 aa17.69■□□□□ 0.42
SNHG17-208ENST00000456953 GTF2E1P29083 439 aaPredicted RBP17.68■□□□□ 0.42
SNHG17-208ENST00000456953 MAP2K2P36507 400 aa17.68■□□□□ 0.42
SNHG17-208ENST00000456953 SCNN1DP51172 638 aa17.68■□□□□ 0.42
SNHG17-208ENST00000456953 GRM1Q13255 1194 aa17.68■□□□□ 0.42
SNHG17-208ENST00000456953 CRY2Q49AN0 593 aa17.68■□□□□ 0.42
SNHG17-208ENST00000456953 GRIPAP1Q4V328 841 aa17.68■□□□□ 0.42
SNHG17-208ENST00000456953 CST9Q5W186 159 aa17.68■□□□□ 0.42
SNHG17-208ENST00000456953 USP50Q70EL3 339 aaPredicted RBP17.68■□□□□ 0.42
SNHG17-208ENST00000456953 COL4A5P29400 1685 aa17.67■□□□□ 0.42
SNHG17-208ENST00000456953 TRPM7Q96QT4 1865 aa17.67■□□□□ 0.42
SNHG17-208ENST00000456953 PRAMEF22A3QJZ6 481 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms