RNA–Protein interactions for RNA: ENST00000456133.5

EPCAM-204, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 1,501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-204ENST00000456133 IL17REQ8NFR9 667 aa18.06■□□□□ 0.48
EPCAM-204ENST00000456133 IQCA1LA6NCM1 817 aa18.05■□□□□ 0.48
EPCAM-204ENST00000456133 SOGA3Q5TF21 947 aa18.05■□□□□ 0.48
EPCAM-204ENST00000456133 MASTLQ96GX5 879 aa18.05■□□□□ 0.48
EPCAM-204ENST00000456133 TAF1DQ9H5J8 278 aaPredicted RBP18.05■□□□□ 0.48
EPCAM-204ENST00000456133 PRDM10Q9NQV6 1147 aa18.05■□□□□ 0.48
EPCAM-204ENST00000456133 CLSPNQ9HAW4 1339 aa18.05■□□□□ 0.48
EPCAM-204ENST00000456133 NPM2Q86SE8 214 aaKnown RBP18.04■□□□□ 0.48
EPCAM-204ENST00000456133 GNAT3A8MTJ3 354 aa18.03■□□□□ 0.48
EPCAM-204ENST00000456133 VEGFBP49765 207 aa18.03■□□□□ 0.48
EPCAM-204ENST00000456133 L3MBTL3Q96JM7 780 aaPredicted RBP18.03■□□□□ 0.48
EPCAM-204ENST00000456133 FMNL2Q96PY5 1086 aa18.03■□□□□ 0.48
EPCAM-204ENST00000456133 PCGF6Q9BYE7 350 aa18.03■□□□□ 0.48
EPCAM-204ENST00000456133 ADAMTSL1Q8N6G6 1762 aa18.03■□□□□ 0.48
EPCAM-204ENST00000456133 TMEM88BA6NKF7 163 aa18.03■□□□□ 0.48
EPCAM-204ENST00000456133 CTCFP49711 727 aaPredicted RBP18.03■□□□□ 0.48
EPCAM-204ENST00000456133 DZIP3Q86Y13 1208 aaKnown RBP18.03■□□□□ 0.48
EPCAM-204ENST00000456133 AIDAQ96BJ3 306 aa18.03■□□□□ 0.48
EPCAM-204ENST00000456133 KCNQ3O43525 872 aa18.02■□□□□ 0.47
EPCAM-204ENST00000456133 ITGBL1O95965 494 aaPredicted RBP18.02■□□□□ 0.47
EPCAM-204ENST00000456133 CCDC93Q567U6 631 aa18.02■□□□□ 0.47
EPCAM-204ENST00000456133 EAPPQ56P03 285 aaPredicted RBP18.02■□□□□ 0.47
EPCAM-204ENST00000456133 C7orf43Q8WVR3 580 aa18.02■□□□□ 0.47
EPCAM-204ENST00000456133 ZNF541Q9H0D2 1346 aa18.01■□□□□ 0.47
EPCAM-204ENST00000456133 COL3A1P02461 1466 aaPredicted RBP18.01■□□□□ 0.47
EPCAM-204ENST00000456133 PIP4K2AP48426 406 aaPredicted RBP18.01■□□□□ 0.47
EPCAM-204ENST00000456133 CC2D1BQ5T0F9 858 aaKnown RBP18.01■□□□□ 0.47
EPCAM-204ENST00000456133 GAS2L2Q8NHY3 880 aa18.01■□□□□ 0.47
EPCAM-204ENST00000456133 CLEC11AQ9Y240 323 aa18.01■□□□□ 0.47
EPCAM-204ENST00000456133 U2SURPO15042 1029 aaKnown RBP18■□□□□ 0.47
EPCAM-204ENST00000456133 NBPF5PQ86XG9 351 aaPredicted RBP18■□□□□ 0.47
EPCAM-204ENST00000456133 ZNF277Q9NRM2 450 aaPredicted RBP18■□□□□ 0.47
EPCAM-204ENST00000456133 FKBP4Q02790 459 aaKnown RBP eCLIP17.99■□□□□ 0.47
EPCAM-204ENST00000456133 HACL1Q9UJ83 578 aa17.99■□□□□ 0.47
EPCAM-204ENST00000456133 NPR1P16066 1061 aa17.98■□□□□ 0.47
EPCAM-204ENST00000456133 LBX1P52954 281 aa17.98■□□□□ 0.47
EPCAM-204ENST00000456133 OLFM4Q6UX06 510 aa17.98■□□□□ 0.47
EPCAM-204ENST00000456133 WBP1LQ9NX94 342 aa17.98■□□□□ 0.47
EPCAM-204ENST00000456133 USP16Q9Y5T5 823 aa17.98■□□□□ 0.47
EPCAM-204ENST00000456133 BTBD11A6QL63 1104 aa17.98■□□□□ 0.47
EPCAM-204ENST00000456133 EPHX2P34913 555 aa17.98■□□□□ 0.47
EPCAM-204ENST00000456133 KIF7Q2M1P5 1343 aa17.97■□□□□ 0.47
EPCAM-204ENST00000456133 CEMIPQ8WUJ3 1361 aa17.97■□□□□ 0.47
EPCAM-204ENST00000456133 PER1O15534 1290 aaPredicted RBP17.97■□□□□ 0.47
EPCAM-204ENST00000456133 PRAMEF22A3QJZ6 481 aa17.96■□□□□ 0.47
EPCAM-204ENST00000456133 CLEC4GQ6UXB4 293 aa17.96■□□□□ 0.47
EPCAM-204ENST00000456133 KLRG2A4D1S0 409 aaPredicted RBP17.95■□□□□ 0.46
EPCAM-204ENST00000456133 CNGB1Q14028 1251 aaPredicted RBP17.95■□□□□ 0.46
EPCAM-204ENST00000456133 DEFB115Q30KQ5 88 aa17.95■□□□□ 0.46
EPCAM-204ENST00000456133 MAP1SQ66K74 1059 aaPredicted RBP17.95■□□□□ 0.46
EPCAM-204ENST00000456133 CNTROBQ8N137 903 aa17.95■□□□□ 0.46
EPCAM-204ENST00000456133 ZNF652Q9Y2D9 606 aa17.95■□□□□ 0.46
EPCAM-204ENST00000456133 RNF123Q5XPI4 1314 aa17.95■□□□□ 0.46
EPCAM-204ENST00000456133 TRPM7Q96QT4 1865 aa17.95■□□□□ 0.46
EPCAM-204ENST00000456133 RASSF10A6NK89 507 aa17.94■□□□□ 0.46
EPCAM-204ENST00000456133 FAM177BA6PVY3 158 aa17.94■□□□□ 0.46
EPCAM-204ENST00000456133 HSPA8P11142 646 aaKnown RBP17.94■□□□□ 0.46
EPCAM-204ENST00000456133 IARSP41252 1262 aaKnown RBP17.94■□□□□ 0.46
EPCAM-204ENST00000456133 RTKN2Q8IZC4 609 aa17.94■□□□□ 0.46
EPCAM-204ENST00000456133 SYNE4Q8N205 404 aa17.94■□□□□ 0.46
EPCAM-204ENST00000456133 TPTE2Q6XPS3 522 aa17.93■□□□□ 0.46
EPCAM-204ENST00000456133 PNMA8AQ86V59 439 aaPredicted RBP17.93■□□□□ 0.46
EPCAM-204ENST00000456133 PHACTR3Q96KR7 559 aa17.93■□□□□ 0.46
EPCAM-204ENST00000456133 NIP7Q9Y221 180 aaKnown RBP eCLIP17.93■□□□□ 0.46
EPCAM-204ENST00000456133 NUP98P52948 1817 aa17.93■□□□□ 0.46
EPCAM-204ENST00000456133 FZD9O00144 591 aa17.93■□□□□ 0.46
EPCAM-204ENST00000456133 WDR33Q9C0J8 1336 aaKnown RBP17.92■□□□□ 0.46
EPCAM-204ENST00000456133 LTBP1Q14766 1721 aa17.92■□□□□ 0.46
EPCAM-204ENST00000456133 ABHD8Q96I13 439 aa17.92■□□□□ 0.46
EPCAM-204ENST00000456133 NBPF26B4DH59 902 aa17.91■□□□□ 0.46
EPCAM-204ENST00000456133 SNRPA1P09661 255 aaKnown RBP17.91■□□□□ 0.46
EPCAM-204ENST00000456133 ALDH1B1P30837 517 aa17.91■□□□□ 0.46
EPCAM-204ENST00000456133 PRKAR2BP31323 418 aa17.91■□□□□ 0.46
EPCAM-204ENST00000456133 NBPF10Q6P3W6 841 aaKnown RBP17.91■□□□□ 0.46
EPCAM-204ENST00000456133 GPC2Q8N158 579 aa17.91■□□□□ 0.46
EPCAM-204ENST00000456133 NBPF15Q8N660 670 aa17.91■□□□□ 0.46
EPCAM-204ENST00000456133 ABT1Q9ULW3 272 aaKnown RBP17.91■□□□□ 0.46
EPCAM-204ENST00000456133 LAMB4A4D0S4 1761 aa17.9■□□□□ 0.46
EPCAM-204ENST00000456133 COL4A5P29400 1685 aa17.9■□□□□ 0.46
EPCAM-204ENST00000456133 SNED1Q8TER0 1413 aa17.89■□□□□ 0.46
EPCAM-204ENST00000456133 MAP2K1Q02750 393 aaPredicted RBP17.89■□□□□ 0.45
EPCAM-204ENST00000456133 HLFQ16534 295 aa17.89■□□□□ 0.45
EPCAM-204ENST00000456133 RSPH6AQ9H0K4 717 aa17.89■□□□□ 0.45
EPCAM-204ENST00000456133 GJA3Q9Y6H8 435 aa17.89■□□□□ 0.45
EPCAM-204ENST00000456133 THSD7BQ9C0I4 1608 aa17.89■□□□□ 0.45
EPCAM-204ENST00000456133 GTF2E1P29083 439 aaPredicted RBP17.88■□□□□ 0.45
EPCAM-204ENST00000456133 JDP2Q8WYK2 163 aa17.88■□□□□ 0.45
EPCAM-204ENST00000456133 DDX21Q9NR30 783 aaKnown RBP eCLIP17.88■□□□□ 0.45
EPCAM-204ENST00000456133 RGL2O15211 777 aa17.88■□□□□ 0.45
EPCAM-204ENST00000456133 FMR1Q06787 632 aaKnown RBP eCLIP17.88■□□□□ 0.45
EPCAM-204ENST00000456133 FAM161AQ3B820 660 aa17.88■□□□□ 0.45
EPCAM-204ENST00000456133 MCM10Q7L590 875 aa17.88■□□□□ 0.45
EPCAM-204ENST00000456133 PSMD1Q99460 953 aa17.88■□□□□ 0.45
EPCAM-204ENST00000456133 NPC1L1Q9UHC9 1359 aa17.87■□□□□ 0.45
EPCAM-204ENST00000456133 SLC34A2O95436 690 aa17.87■□□□□ 0.45
EPCAM-204ENST00000456133 EIF6P56537 245 aaKnown RBP17.87■□□□□ 0.45
EPCAM-204ENST00000456133 ABCC12Q96J65 1359 aa17.86■□□□□ 0.45
EPCAM-204ENST00000456133 PAXIP1Q6ZW49 1069 aaPredicted RBP17.86■□□□□ 0.45
EPCAM-204ENST00000456133 RTF1Q92541 710 aaKnown RBP17.86■□□□□ 0.45
EPCAM-204ENST00000456133 LMOD1P29536 600 aaPredicted RBP17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms