RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 RIPK4P57078 832 aa12.3□□□□□ -0.44
CHCHD4P3-201ENST00000455954 C1orf141Q5JVX7 400 aa12.3□□□□□ -0.44
CHCHD4P3-201ENST00000455954 GAS2L3Q86XJ1 694 aa12.3□□□□□ -0.44
CHCHD4P3-201ENST00000455954 LNPKQ9C0E8 428 aa12.3□□□□□ -0.44
CHCHD4P3-201ENST00000455954 ITGB4P16144 1822 aa12.3□□□□□ -0.44
CHCHD4P3-201ENST00000455954 ZBTB7BO15156 539 aaPredicted RBP12.29□□□□□ -0.44
CHCHD4P3-201ENST00000455954 BAG4O95429 457 aaKnown RBP12.29□□□□□ -0.44
CHCHD4P3-201ENST00000455954 CYP2E1P05181 493 aaPredicted RBP12.29□□□□□ -0.44
CHCHD4P3-201ENST00000455954 TBC1D9Q6ZT07 1266 aa12.29□□□□□ -0.44
CHCHD4P3-201ENST00000455954 PKNOX2Q96KN3 472 aa12.29□□□□□ -0.44
CHCHD4P3-201ENST00000455954 API5Q9BZZ5 524 aaKnown RBP12.29□□□□□ -0.44
CHCHD4P3-201ENST00000455954 TFCP2L1Q9NZI6 479 aa12.29□□□□□ -0.44
CHCHD4P3-201ENST00000455954 U2SURPO15042 1029 aaKnown RBP12.28□□□□□ -0.44
CHCHD4P3-201ENST00000455954 MRPL50Q8N5N7 158 aaKnown RBP12.28□□□□□ -0.44
CHCHD4P3-201ENST00000455954 MTFR1LQ9H019 292 aa12.28□□□□□ -0.44
CHCHD4P3-201ENST00000455954 IFT57Q9NWB7 429 aa12.28□□□□□ -0.44
CHCHD4P3-201ENST00000455954 PPP1R1BQ9UD71 204 aaPredicted RBP12.28□□□□□ -0.44
CHCHD4P3-201ENST00000455954 ATF5Q9Y2D1 282 aaPredicted RBP12.28□□□□□ -0.44
CHCHD4P3-201ENST00000455954 TUBGCP6Q96RT7 1819 aa12.27□□□□□ -0.44
CHCHD4P3-201ENST00000455954 ZNF500O60304 480 aaPredicted RBP12.27□□□□□ -0.45
CHCHD4P3-201ENST00000455954 MSNP26038 577 aaKnown RBP12.27□□□□□ -0.45
CHCHD4P3-201ENST00000455954 CABP4P57796 275 aa12.27□□□□□ -0.45
CHCHD4P3-201ENST00000455954 GNAI1P63096 354 aa12.27□□□□□ -0.45
CHCHD4P3-201ENST00000455954 LMOD3Q0VAK6 560 aa12.27□□□□□ -0.45
CHCHD4P3-201ENST00000455954 AKAP4Q5JQC9 854 aa12.27□□□□□ -0.45
CHCHD4P3-201ENST00000455954 MTERF4Q7Z6M4 381 aaKnown RBP12.27□□□□□ -0.45
CHCHD4P3-201ENST00000455954 SLC16A10Q8TF71 515 aa12.27□□□□□ -0.45
CHCHD4P3-201ENST00000455954 PDLIM2Q96JY6 352 aa12.27□□□□□ -0.45
CHCHD4P3-201ENST00000455954 ARXQ96QS3 562 aa12.27□□□□□ -0.45
CHCHD4P3-201ENST00000455954 ATG3Q9NT62 314 aa12.27□□□□□ -0.45
CHCHD4P3-201ENST00000455954 ASAP1Q9ULH1 1129 aa12.27□□□□□ -0.45
CHCHD4P3-201ENST00000455954 KDM6AO15550 1401 aaPredicted RBP12.27□□□□□ -0.45
CHCHD4P3-201ENST00000455954 LOC102724428A0A0B4J2F2 783 aa12.26□□□□□ -0.45
CHCHD4P3-201ENST00000455954 PTGER2P43116 358 aa12.26□□□□□ -0.45
CHCHD4P3-201ENST00000455954 SIK1P57059 783 aa12.26□□□□□ -0.45
CHCHD4P3-201ENST00000455954 NFE2L2Q16236 605 aa12.26□□□□□ -0.45
CHCHD4P3-201ENST00000455954 CSPP1Q1MSJ5 1256 aa12.26□□□□□ -0.45
CHCHD4P3-201ENST00000455954 ANKRD45Q5TZF3 282 aa12.26□□□□□ -0.45
CHCHD4P3-201ENST00000455954 KLHL34Q8N239 644 aa12.26□□□□□ -0.45
CHCHD4P3-201ENST00000455954 DDX49Q9Y6V7 483 aaKnown RBP12.26□□□□□ -0.45
CHCHD4P3-201ENST00000455954 PNPLA7Q6ZV29 1317 aa12.26□□□□□ -0.45
CHCHD4P3-201ENST00000455954 ZNF853P0CG23 659 aa12.25□□□□□ -0.45
CHCHD4P3-201ENST00000455954 SSFA2P28290 1259 aa12.25□□□□□ -0.45
CHCHD4P3-201ENST00000455954 MTHFSDQ2M296 383 aaKnown RBP12.25□□□□□ -0.45
CHCHD4P3-201ENST00000455954 GAS2L2Q8NHY3 880 aa12.25□□□□□ -0.45
CHCHD4P3-201ENST00000455954 QSER1Q2KHR3 1735 aa12.25□□□□□ -0.45
CHCHD4P3-201ENST00000455954 AK9Q5TCS8 1911 aa12.25□□□□□ -0.45
CHCHD4P3-201ENST00000455954 VAMP4O75379 141 aa12.24□□□□□ -0.45
CHCHD4P3-201ENST00000455954 C5P01031 1676 aa12.24□□□□□ -0.45
CHCHD4P3-201ENST00000455954 ATP6V1AP38606 617 aa12.24□□□□□ -0.45
CHCHD4P3-201ENST00000455954 INTS3Q68E01 1043 aaKnown RBP12.24□□□□□ -0.45
CHCHD4P3-201ENST00000455954 CASC1Q6TDU7 716 aa12.24□□□□□ -0.45
CHCHD4P3-201ENST00000455954 KIAA1211Q6ZU35 1233 aa12.24□□□□□ -0.45
CHCHD4P3-201ENST00000455954 N4BP2Q86UW6 1770 aaPredicted RBP12.24□□□□□ -0.45
CHCHD4P3-201ENST00000455954 NFATC2IPQ8NCF5 419 aa12.24□□□□□ -0.45
CHCHD4P3-201ENST00000455954 FLAD1Q8NFF5 587 aa12.24□□□□□ -0.45
CHCHD4P3-201ENST00000455954 SGIP1Q9BQI5 828 aa12.24□□□□□ -0.45
CHCHD4P3-201ENST00000455954 NOL7Q9UMY1 257 aaKnown RBP12.24□□□□□ -0.45
CHCHD4P3-201ENST00000455954 MBD3O95983 291 aa12.23□□□□□ -0.45
CHCHD4P3-201ENST00000455954 TTC22Q5TAA0 569 aa12.23□□□□□ -0.45
CHCHD4P3-201ENST00000455954 COL23A1Q86Y22 540 aaPredicted RBP12.23□□□□□ -0.45
CHCHD4P3-201ENST00000455954 AK7Q96M32 723 aa12.23□□□□□ -0.45
CHCHD4P3-201ENST00000455954 DCTPP1Q9H773 170 aa12.23□□□□□ -0.45
CHCHD4P3-201ENST00000455954 RNMTO43148 476 aaKnown RBP12.22□□□□□ -0.45
CHCHD4P3-201ENST00000455954 ST18O60284 1047 aa12.22□□□□□ -0.45
CHCHD4P3-201ENST00000455954 CD2BP2O95400 341 aaKnown RBP12.22□□□□□ -0.45
CHCHD4P3-201ENST00000455954 MCM2P49736 904 aa12.22□□□□□ -0.45
CHCHD4P3-201ENST00000455954 ITPK1Q13572 414 aa12.22□□□□□ -0.45
CHCHD4P3-201ENST00000455954 LINC00116Q8NCU8 138 aa12.22□□□□□ -0.45
CHCHD4P3-201ENST00000455954 RBM42Q9BTD8 480 aaKnown RBP12.22□□□□□ -0.45
CHCHD4P3-201ENST00000455954 LGR6Q9HBX8 967 aa12.22□□□□□ -0.45
CHCHD4P3-201ENST00000455954 LMBRD1Q9NUN5 540 aa12.22□□□□□ -0.45
CHCHD4P3-201ENST00000455954 TAF1LQ8IZX4 1826 aa12.22□□□□□ -0.45
CHCHD4P3-201ENST00000455954 C4BP0C0L5 1744 aa12.21□□□□□ -0.45
CHCHD4P3-201ENST00000455954 POLD1P28340 1107 aa12.21□□□□□ -0.45
CHCHD4P3-201ENST00000455954 PLEKHM2Q8IWE5 1019 aa12.21□□□□□ -0.45
CHCHD4P3-201ENST00000455954 RPAP2Q8IXW5 612 aaPredicted RBP12.21□□□□□ -0.45
CHCHD4P3-201ENST00000455954 VSIG10Q8N0Z9 540 aa12.21□□□□□ -0.45
CHCHD4P3-201ENST00000455954 SLC52A2Q9HAB3 445 aa12.21□□□□□ -0.45
CHCHD4P3-201ENST00000455954 ATP10DQ9P241 1426 aa12.2□□□□□ -0.46
CHCHD4P3-201ENST00000455954 SCN11AQ9UI33 1791 aa12.2□□□□□ -0.46
CHCHD4P3-201ENST00000455954 REC8O95072 547 aa12.2□□□□□ -0.46
CHCHD4P3-201ENST00000455954 PRKAR2BP31323 418 aa12.2□□□□□ -0.46
CHCHD4P3-201ENST00000455954 ZSCAN23Q3MJ62 389 aa12.2□□□□□ -0.46
CHCHD4P3-201ENST00000455954 SIRT2Q8IXJ6 389 aa12.2□□□□□ -0.46
CHCHD4P3-201ENST00000455954 SLC4A9Q96Q91 983 aa12.2□□□□□ -0.46
CHCHD4P3-201ENST00000455954 USP26Q9BXU7 913 aa12.2□□□□□ -0.46
CHCHD4P3-201ENST00000455954 CCDC39Q9UFE4 941 aa12.2□□□□□ -0.46
CHCHD4P3-201ENST00000455954 GNAT3A8MTJ3 354 aa12.19□□□□□ -0.46
CHCHD4P3-201ENST00000455954 DYNC1I1O14576 645 aa12.19□□□□□ -0.46
CHCHD4P3-201ENST00000455954 EPB41L2O43491 1005 aaKnown RBP12.19□□□□□ -0.46
CHCHD4P3-201ENST00000455954 PTCD1O75127 700 aaKnown RBP12.19□□□□□ -0.46
CHCHD4P3-201ENST00000455954 GSPT1P15170 499 aaKnown RBP12.19□□□□□ -0.46
CHCHD4P3-201ENST00000455954 LRSAM1Q6UWE0 723 aa12.19□□□□□ -0.46
CHCHD4P3-201ENST00000455954 ANKRD44Q8N8A2 993 aa12.19□□□□□ -0.46
CHCHD4P3-201ENST00000455954 PHACTR3Q96KR7 559 aa12.19□□□□□ -0.46
CHCHD4P3-201ENST00000455954 ZMYND15Q9H091 742 aa12.19□□□□□ -0.46
CHCHD4P3-201ENST00000455954 ZKSCAN5Q9Y2L8 839 aa12.19□□□□□ -0.46
CHCHD4P3-201ENST00000455954 CACNA1FO60840 1977 aa12.19□□□□□ -0.46
CHCHD4P3-201ENST00000455954 ZNF831Q5JPB2 1677 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms