RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 GDPD2Q9HCC8 539 aa14.8□□□□□ -0.04
SEMA4D-213ENST00000455551 HYPKQ9NX55 129 aa14.8□□□□□ -0.04
SEMA4D-213ENST00000455551 RGPD5Q99666 1765 aa14.79□□□□□ -0.04
SEMA4D-213ENST00000455551 PHRF1Q9P1Y6 1649 aaKnown RBP14.79□□□□□ -0.04
SEMA4D-213ENST00000455551 GRM8O00222 908 aa14.79□□□□□ -0.04
SEMA4D-213ENST00000455551 MTX1Q13505 466 aa14.79□□□□□ -0.04
SEMA4D-213ENST00000455551 RIC3Q7Z5B4 369 aa14.79□□□□□ -0.04
SEMA4D-213ENST00000455551 DDX54Q8TDD1 881 aaKnown RBP14.79□□□□□ -0.04
SEMA4D-213ENST00000455551 CABLES1Q8TDN4 633 aa14.79□□□□□ -0.04
SEMA4D-213ENST00000455551 PRIM1P49642 420 aaKnown RBP14.79□□□□□ -0.04
SEMA4D-213ENST00000455551 ZNF445P59923 1031 aa14.79□□□□□ -0.04
SEMA4D-213ENST00000455551 KLHDC4Q8TBB5 520 aa14.79□□□□□ -0.04
SEMA4D-213ENST00000455551 ECHDC1Q9NTX5 307 aa14.79□□□□□ -0.04
SEMA4D-213ENST00000455551 TMEM63CQ9P1W3 806 aa14.79□□□□□ -0.04
SEMA4D-213ENST00000455551 ESPNB1AK53 854 aa14.78□□□□□ -0.04
SEMA4D-213ENST00000455551 NFATC2IPQ8NCF5 419 aa14.78□□□□□ -0.04
SEMA4D-213ENST00000455551 LINS1Q8NG48 757 aa14.78□□□□□ -0.04
SEMA4D-213ENST00000455551 JARID2Q92833 1246 aaPredicted RBP14.78□□□□□ -0.04
SEMA4D-213ENST00000455551 INTS4Q96HW7 963 aaKnown RBP14.78□□□□□ -0.04
SEMA4D-213ENST00000455551 KAZALD1Q96I82 304 aa14.78□□□□□ -0.04
SEMA4D-213ENST00000455551 CCDC8Q9H0W5 538 aaPredicted RBP14.78□□□□□ -0.04
SEMA4D-213ENST00000455551 TTC41PQ6P2S7 1318 aa14.78□□□□□ -0.04
SEMA4D-213ENST00000455551 CSB-PGBD3P0DP91 1061 aa14.78□□□□□ -0.04
SEMA4D-213ENST00000455551 DDX21Q9NR30 783 aaKnown RBP eCLIP14.78□□□□□ -0.04
SEMA4D-213ENST00000455551 HEG1Q9ULI3 1381 aa14.78□□□□□ -0.04
SEMA4D-213ENST00000455551 SYCE3A1L190 88 aa14.78□□□□□ -0.04
SEMA4D-213ENST00000455551 DDX58O95786 925 aaKnown RBP14.78□□□□□ -0.04
SEMA4D-213ENST00000455551 PTH1RQ03431 593 aa14.78□□□□□ -0.04
SEMA4D-213ENST00000455551 ZNF790Q6PG37 636 aa14.78□□□□□ -0.04
SEMA4D-213ENST00000455551 RBSNQ9H1K0 784 aa14.78□□□□□ -0.04
SEMA4D-213ENST00000455551 AK2P54819 239 aa14.77□□□□□ -0.04
SEMA4D-213ENST00000455551 PDIA6Q15084 440 aa14.77□□□□□ -0.04
SEMA4D-213ENST00000455551 CHRNA2Q15822 529 aa14.77□□□□□ -0.04
SEMA4D-213ENST00000455551 ANP32BQ92688 251 aaKnown RBP14.77□□□□□ -0.04
SEMA4D-213ENST00000455551 C1orf167Q5SNV9 1468 aa14.77□□□□□ -0.05
SEMA4D-213ENST00000455551 CASTP20810 708 aaKnown RBP14.77□□□□□ -0.05
SEMA4D-213ENST00000455551 GPATCH3Q96I76 525 aa14.77□□□□□ -0.05
SEMA4D-213ENST00000455551 IGKV5-2P06315 115 aa14.77□□□□□ -0.05
SEMA4D-213ENST00000455551 PRPF40BQ6NWY9 871 aaKnown RBP14.77□□□□□ -0.05
SEMA4D-213ENST00000455551 TLR7Q9NYK1 1049 aaKnown RBP14.77□□□□□ -0.05
SEMA4D-213ENST00000455551 CLCN1P35523 988 aa14.76□□□□□ -0.05
SEMA4D-213ENST00000455551 G3BP1Q13283 466 aaKnown RBP eCLIP14.76□□□□□ -0.05
SEMA4D-213ENST00000455551 XAGE3Q8WTP9 111 aa14.76□□□□□ -0.05
SEMA4D-213ENST00000455551 USP42Q9H9J4 1324 aaKnown RBP14.76□□□□□ -0.05
SEMA4D-213ENST00000455551 SASH1O94885 1247 aa14.76□□□□□ -0.05
SEMA4D-213ENST00000455551 EAF2Q96CJ1 260 aaPredicted RBP14.76□□□□□ -0.05
SEMA4D-213ENST00000455551 NPHP3Q7Z494 1330 aa14.76□□□□□ -0.05
SEMA4D-213ENST00000455551 RUFY3Q7L099 469 aa14.75□□□□□ -0.05
SEMA4D-213ENST00000455551 ERC1Q8IUD2 1116 aa14.75□□□□□ -0.05
SEMA4D-213ENST00000455551 IL17RAQ96F46 866 aa14.75□□□□□ -0.05
SEMA4D-213ENST00000455551 MYD88Q99836 296 aa14.75□□□□□ -0.05
SEMA4D-213ENST00000455551 C19orf44Q9H6X5 657 aa14.75□□□□□ -0.05
SEMA4D-213ENST00000455551 SLC52A2Q9HAB3 445 aa14.75□□□□□ -0.05
SEMA4D-213ENST00000455551 TATP17735 454 aaPredicted RBP14.75□□□□□ -0.05
SEMA4D-213ENST00000455551 CCDC173Q0VFZ6 552 aa14.75□□□□□ -0.05
SEMA4D-213ENST00000455551 COPS6Q7L5N1 327 aa14.75□□□□□ -0.05
SEMA4D-213ENST00000455551 ZNF496Q96IT1 587 aaPredicted RBP14.75□□□□□ -0.05
SEMA4D-213ENST00000455551 OVOS2A0A0G2JMS6 1433 aa14.75□□□□□ -0.05
SEMA4D-213ENST00000455551 ADCK5Q3MIX3 580 aa14.75□□□□□ -0.05
SEMA4D-213ENST00000455551 TTC14Q96N46 770 aa14.75□□□□□ -0.05
SEMA4D-213ENST00000455551 TRPM3Q9HCF6 1732 aaPredicted RBP14.75□□□□□ -0.05
SEMA4D-213ENST00000455551 KDM6AO15550 1401 aaPredicted RBP14.75□□□□□ -0.05
SEMA4D-213ENST00000455551 RUFY2Q8WXA3 655 aa14.74□□□□□ -0.05
SEMA4D-213ENST00000455551 FAM227BQ96M60 508 aa14.74□□□□□ -0.05
SEMA4D-213ENST00000455551 JAKMIP1Q96N16 626 aaKnown RBP14.74□□□□□ -0.05
SEMA4D-213ENST00000455551 BOLA2Q9H3K6 86 aa14.74□□□□□ -0.05
SEMA4D-213ENST00000455551 LARGE1O95461 756 aa14.74□□□□□ -0.05
SEMA4D-213ENST00000455551 PHKG2P15735 406 aa14.74□□□□□ -0.05
SEMA4D-213ENST00000455551 NAP1L5Q96NT1 182 aaPredicted RBP14.74□□□□□ -0.05
SEMA4D-213ENST00000455551 EPB41L2O43491 1005 aaKnown RBP14.74□□□□□ -0.05
SEMA4D-213ENST00000455551 GADD45BO75293 160 aaPredicted RBP14.74□□□□□ -0.05
SEMA4D-213ENST00000455551 EPHA10Q5JZY3 1008 aa14.74□□□□□ -0.05
SEMA4D-213ENST00000455551 HDAC5Q9UQL6 1122 aa14.74□□□□□ -0.05
SEMA4D-213ENST00000455551 ATF3P18847 181 aa14.73□□□□□ -0.05
SEMA4D-213ENST00000455551 KCNJ4P48050 445 aa14.73□□□□□ -0.05
SEMA4D-213ENST00000455551 NEXNQ0ZGT2 675 aa14.73□□□□□ -0.05
SEMA4D-213ENST00000455551 WDR33Q9C0J8 1336 aaKnown RBP14.73□□□□□ -0.05
SEMA4D-213ENST00000455551 RNF214Q8ND24 703 aa14.73□□□□□ -0.05
SEMA4D-213ENST00000455551 USP16Q9Y5T5 823 aa14.73□□□□□ -0.05
SEMA4D-213ENST00000455551 ADAMTSL3P82987 1691 aa14.73□□□□□ -0.05
SEMA4D-213ENST00000455551 MEGF6O75095 1541 aa14.73□□□□□ -0.05
SEMA4D-213ENST00000455551 RPAP1Q9BWH6 1393 aaPredicted RBP14.73□□□□□ -0.05
SEMA4D-213ENST00000455551 NEURL1BA8MQ27 555 aa14.73□□□□□ -0.05
SEMA4D-213ENST00000455551 LARP1Q6PKG0 1096 aaKnown RBP14.73□□□□□ -0.05
SEMA4D-213ENST00000455551 EVI5LQ96CN4 794 aa14.73□□□□□ -0.05
SEMA4D-213ENST00000455551 LIMCH1Q9UPQ0 1083 aa14.73□□□□□ -0.05
SEMA4D-213ENST00000455551 MBD3O95983 291 aa14.72□□□□□ -0.05
SEMA4D-213ENST00000455551 NMIQ13287 307 aaPredicted RBP14.72□□□□□ -0.05
SEMA4D-213ENST00000455551 SIPA1L3O60292 1781 aaPredicted RBP14.72□□□□□ -0.05
SEMA4D-213ENST00000455551 CCDC83Q8IWF9 413 aa14.72□□□□□ -0.05
SEMA4D-213ENST00000455551 PPP1R9BQ96SB3 815 aa14.72□□□□□ -0.05
SEMA4D-213ENST00000455551 TCHHQ07283 1943 aa14.72□□□□□ -0.05
SEMA4D-213ENST00000455551 USP48Q86UV5 1035 aa14.72□□□□□ -0.05
SEMA4D-213ENST00000455551 TTC5Q8N0Z6 440 aa14.72□□□□□ -0.05
SEMA4D-213ENST00000455551 GCKRQ14397 625 aa14.71□□□□□ -0.05
SEMA4D-213ENST00000455551 LRSAM1Q6UWE0 723 aa14.71□□□□□ -0.05
SEMA4D-213ENST00000455551 FSD1Q9BTV5 496 aa14.71□□□□□ -0.05
SEMA4D-213ENST00000455551 PDRG1Q9NUG6 133 aa14.71□□□□□ -0.05
SEMA4D-213ENST00000455551 C5P01031 1676 aa14.71□□□□□ -0.05
SEMA4D-213ENST00000455551 CAMTA1Q9Y6Y1 1673 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms