RNA–Protein interactions for RNA: ENST00000455396.1

CRAT-205, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 3

Gene CRAT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-205ENST00000455396 CAMTA2O94983 1202 aa16.69■□□□□ 0.26
CRAT-205ENST00000455396 FKBP4Q02790 459 aaKnown RBP eCLIP16.69■□□□□ 0.26
CRAT-205ENST00000455396 CCDC24Q8N4L8 307 aa16.69■□□□□ 0.26
CRAT-205ENST00000455396 ZNF496Q96IT1 587 aaPredicted RBP16.69■□□□□ 0.26
CRAT-205ENST00000455396 POLR3GLQ9BT43 218 aa16.69■□□□□ 0.26
CRAT-205ENST00000455396 WDR33Q9C0J8 1336 aaKnown RBP16.69■□□□□ 0.26
CRAT-205ENST00000455396 EPHX2P34913 555 aa16.68■□□□□ 0.26
CRAT-205ENST00000455396 ZNF790Q6PG37 636 aa16.68■□□□□ 0.26
CRAT-205ENST00000455396 CNTROBQ8N137 903 aa16.68■□□□□ 0.26
CRAT-205ENST00000455396 DICER1Q9UPY3 1922 aaKnown RBP16.68■□□□□ 0.26
CRAT-205ENST00000455396 FZD9O00144 591 aa16.67■□□□□ 0.26
CRAT-205ENST00000455396 EAPPQ56P03 285 aaPredicted RBP16.67■□□□□ 0.26
CRAT-205ENST00000455396 ANKRD31Q8N7Z5 1873 aa16.67■□□□□ 0.26
CRAT-205ENST00000455396 ZNF541Q9H0D2 1346 aa16.67■□□□□ 0.26
CRAT-205ENST00000455396 NPR1P16066 1061 aa16.66■□□□□ 0.26
CRAT-205ENST00000455396 MLLT1Q03111 559 aaPredicted RBP16.66■□□□□ 0.26
CRAT-205ENST00000455396 CLEC4GQ6UXB4 293 aa16.66■□□□□ 0.26
CRAT-205ENST00000455396 RTKN2Q8IZC4 609 aa16.66■□□□□ 0.26
CRAT-205ENST00000455396 SCN4AP35499 1836 aa16.66■□□□□ 0.26
CRAT-205ENST00000455396 RGL2O15211 777 aa16.65■□□□□ 0.26
CRAT-205ENST00000455396 NPHP1O15259 732 aa16.65■□□□□ 0.26
CRAT-205ENST00000455396 HMOX1P09601 288 aa16.65■□□□□ 0.26
CRAT-205ENST00000455396 NPM2Q86SE8 214 aaKnown RBP16.65■□□□□ 0.26
CRAT-205ENST00000455396 CLEC11AQ9Y240 323 aa16.65■□□□□ 0.26
CRAT-205ENST00000455396 KNSTRNQ9Y448 316 aa16.65■□□□□ 0.26
CRAT-205ENST00000455396 CCDC88AQ3V6T2 1871 aa16.65■□□□□ 0.26
CRAT-205ENST00000455396 COL11A2P13942 1736 aaPredicted RBP16.65■□□□□ 0.26
CRAT-205ENST00000455396 MAP1SQ66K74 1059 aaPredicted RBP16.64■□□□□ 0.25
CRAT-205ENST00000455396 GPC2Q8N158 579 aa16.64■□□□□ 0.25
CRAT-205ENST00000455396 SCN7AQ01118 1682 aa16.64■□□□□ 0.25
CRAT-205ENST00000455396 UBR2Q8IWV8 1755 aa16.64■□□□□ 0.25
CRAT-205ENST00000455396 ADAMTSL1Q8N6G6 1762 aa16.64■□□□□ 0.25
CRAT-205ENST00000455396 A1BGP04217 495 aa16.63■□□□□ 0.25
CRAT-205ENST00000455396 TEFQ10587 303 aa16.63■□□□□ 0.25
CRAT-205ENST00000455396 AMER1Q5JTC6 1135 aaPredicted RBP16.63■□□□□ 0.25
CRAT-205ENST00000455396 IL17REQ8NFR9 667 aa16.63■□□□□ 0.25
CRAT-205ENST00000455396 FMNL2Q96PY5 1086 aa16.63■□□□□ 0.25
CRAT-205ENST00000455396 DDX21Q9NR30 783 aaKnown RBP eCLIP16.63■□□□□ 0.25
CRAT-205ENST00000455396 ZNF277Q9NRM2 450 aaPredicted RBP16.63■□□□□ 0.25
CRAT-205ENST00000455396 SLX4Q8IY92 1834 aa16.62■□□□□ 0.25
CRAT-205ENST00000455396 IARSP41252 1262 aaKnown RBP16.62■□□□□ 0.25
CRAT-205ENST00000455396 ECE1P42892 770 aa16.62■□□□□ 0.25
CRAT-205ENST00000455396 EIF4G2P78344 907 aaKnown RBP eCLIP16.62■□□□□ 0.25
CRAT-205ENST00000455396 NBPF5PQ86XG9 351 aaPredicted RBP16.62■□□□□ 0.25
CRAT-205ENST00000455396 DZIP3Q86Y13 1208 aaKnown RBP16.62■□□□□ 0.25
CRAT-205ENST00000455396 ABT1Q9ULW3 272 aaKnown RBP16.62■□□□□ 0.25
CRAT-205ENST00000455396 ZNF330Q9Y3S2 320 aaPredicted RBP16.62■□□□□ 0.25
CRAT-205ENST00000455396 RNF123Q5XPI4 1314 aa16.62■□□□□ 0.25
CRAT-205ENST00000455396 VIRMAQ69YN4 1812 aaKnown RBP16.61■□□□□ 0.25
CRAT-205ENST00000455396 PSMD1Q99460 953 aa16.61■□□□□ 0.25
CRAT-205ENST00000455396 GNAT3A8MTJ3 354 aa16.6■□□□□ 0.25
CRAT-205ENST00000455396 DIAPH1O60610 1272 aaKnown RBP16.6■□□□□ 0.25
CRAT-205ENST00000455396 ALDH1B1P30837 517 aa16.6■□□□□ 0.25
CRAT-205ENST00000455396 TPTE2Q6XPS3 522 aa16.6■□□□□ 0.25
CRAT-205ENST00000455396 GAS2L2Q8NHY3 880 aa16.6■□□□□ 0.25
CRAT-205ENST00000455396 CAPNS2Q96L46 248 aa16.6■□□□□ 0.25
CRAT-205ENST00000455396 BEGAINQ9BUH8 593 aa16.6■□□□□ 0.25
CRAT-205ENST00000455396 ZNF652Q9Y2D9 606 aa16.6■□□□□ 0.25
CRAT-205ENST00000455396 CCDC85CA6NKD9 419 aa16.59■□□□□ 0.25
CRAT-205ENST00000455396 MAP2K2P36507 400 aa16.59■□□□□ 0.25
CRAT-205ENST00000455396 SYNE4Q8N205 404 aa16.59■□□□□ 0.25
CRAT-205ENST00000455396 GPR101Q96P66 508 aaPredicted RBP16.59■□□□□ 0.25
CRAT-205ENST00000455396 CEMIPQ8WUJ3 1361 aa16.59■□□□□ 0.25
CRAT-205ENST00000455396 SNED1Q8TER0 1413 aa16.59■□□□□ 0.25
CRAT-205ENST00000455396 HSPA5P11021 654 aaKnown RBP16.58■□□□□ 0.24
CRAT-205ENST00000455396 CC2D2BQ6DHV5 1058 aa16.58■□□□□ 0.24
CRAT-205ENST00000455396 JDP2Q8WYK2 163 aa16.58■□□□□ 0.24
CRAT-205ENST00000455396 ARFGEF2Q9Y6D5 1785 aa16.57■□□□□ 0.24
CRAT-205ENST00000455396 CA12O43570 354 aa16.57■□□□□ 0.24
CRAT-205ENST00000455396 GRIPAP1Q4V328 841 aa16.57■□□□□ 0.24
CRAT-205ENST00000455396 OLFM4Q6UX06 510 aa16.57■□□□□ 0.24
CRAT-205ENST00000455396 THSD7BQ9C0I4 1608 aa16.56■□□□□ 0.24
CRAT-205ENST00000455396 CRY2Q49AN0 593 aa16.56■□□□□ 0.24
CRAT-205ENST00000455396 CST9Q5W186 159 aa16.56■□□□□ 0.24
CRAT-205ENST00000455396 USP16Q9Y5T5 823 aa16.56■□□□□ 0.24
CRAT-205ENST00000455396 TLL2Q9Y6L7 1015 aa16.56■□□□□ 0.24
CRAT-205ENST00000455396 CLSPNQ9HAW4 1339 aa16.55■□□□□ 0.24
CRAT-205ENST00000455396 LMOD1P29536 600 aaPredicted RBP16.55■□□□□ 0.24
CRAT-205ENST00000455396 SCNN1DP51172 638 aa16.55■□□□□ 0.24
CRAT-205ENST00000455396 EIF6P56537 245 aaKnown RBP16.55■□□□□ 0.24
CRAT-205ENST00000455396 USP50Q70EL3 339 aaPredicted RBP16.55■□□□□ 0.24
CRAT-205ENST00000455396 HHIPL1Q96JK4 782 aa16.55■□□□□ 0.24
CRAT-205ENST00000455396 KCNQ3O43525 872 aa16.54■□□□□ 0.24
CRAT-205ENST00000455396 CYP4F22Q6NT55 531 aa16.54■□□□□ 0.24
CRAT-205ENST00000455396 NIP7Q9Y221 180 aaKnown RBP eCLIP16.54■□□□□ 0.24
CRAT-205ENST00000455396 BTBD11A6QL63 1104 aa16.53■□□□□ 0.24
CRAT-205ENST00000455396 SNRPA1P09661 255 aaKnown RBP16.53■□□□□ 0.24
CRAT-205ENST00000455396 HOXA10P31260 410 aaPredicted RBP16.52■□□□□ 0.24
CRAT-205ENST00000455396 EPS15P42566 896 aa16.52■□□□□ 0.24
CRAT-205ENST00000455396 FMR1Q06787 632 aaKnown RBP eCLIP16.51■□□□□ 0.23
CRAT-205ENST00000455396 PAXIP1Q6ZW49 1069 aaPredicted RBP16.51■□□□□ 0.23
CRAT-205ENST00000455396 SAPCD2Q86UD0 394 aa16.51■□□□□ 0.23
CRAT-205ENST00000455396 MCOLN1Q9GZU1 580 aa16.51■□□□□ 0.23
CRAT-205ENST00000455396 GJA3Q9Y6H8 435 aa16.51■□□□□ 0.23
CRAT-205ENST00000455396 NBPF26B4DH59 902 aa16.5■□□□□ 0.23
CRAT-205ENST00000455396 PER1O15534 1290 aaPredicted RBP16.5■□□□□ 0.23
CRAT-205ENST00000455396 PIP4K2AP48426 406 aaPredicted RBP16.5■□□□□ 0.23
CRAT-205ENST00000455396 BRPF1P55201 1214 aaPredicted RBP16.5■□□□□ 0.23
CRAT-205ENST00000455396 NBPF10Q6P3W6 841 aaKnown RBP16.5■□□□□ 0.23
CRAT-205ENST00000455396 NBPF15Q8N660 670 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms