RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 C4AP0C0L4 1744 aa14.32□□□□□ -0.12
TRAF4-206ENST00000454852 PI4KAP2A4QPH2 592 aa14.31□□□□□ -0.12
TRAF4-206ENST00000454852 ZNF827Q17R98 1081 aa14.31□□□□□ -0.12
TRAF4-206ENST00000454852 TTLL7Q6ZT98 887 aa14.31□□□□□ -0.12
TRAF4-206ENST00000454852 PI4KAP1Q8N8J0 262 aa14.31□□□□□ -0.12
TRAF4-206ENST00000454852 FLAD1Q8NFF5 587 aa14.31□□□□□ -0.12
TRAF4-206ENST00000454852 MAP3K15Q6ZN16 1313 aa14.31□□□□□ -0.12
TRAF4-206ENST00000454852 TUBGCP6Q96RT7 1819 aa14.31□□□□□ -0.12
TRAF4-206ENST00000454852 INTS3Q68E01 1043 aaKnown RBP14.3□□□□□ -0.12
TRAF4-206ENST00000454852 KIF6Q6ZMV9 814 aa14.3□□□□□ -0.12
TRAF4-206ENST00000454852 NPM2Q86SE8 214 aaKnown RBP14.3□□□□□ -0.12
TRAF4-206ENST00000454852 AMIGO3Q86WK7 504 aa14.3□□□□□ -0.12
TRAF4-206ENST00000454852 DZIP3Q86Y13 1208 aaKnown RBP14.3□□□□□ -0.12
TRAF4-206ENST00000454852 DZIP1LQ8IYY4 767 aaKnown RBP14.3□□□□□ -0.12
TRAF4-206ENST00000454852 DNAAF4Q8WXU2 420 aa14.3□□□□□ -0.12
TRAF4-206ENST00000454852 NARFQ9UHQ1 456 aa14.3□□□□□ -0.12
TRAF4-206ENST00000454852 PLIN1O60240 522 aa14.29□□□□□ -0.12
TRAF4-206ENST00000454852 CAMTA2O94983 1202 aa14.29□□□□□ -0.12
TRAF4-206ENST00000454852 AIMP1Q12904 312 aaKnown RBP14.29□□□□□ -0.12
TRAF4-206ENST00000454852 SLC15A2Q16348 729 aa14.29□□□□□ -0.12
TRAF4-206ENST00000454852 TRAPPC3LQ5T215 181 aa14.29□□□□□ -0.12
TRAF4-206ENST00000454852 CLEC4GQ6UXB4 293 aa14.29□□□□□ -0.12
TRAF4-206ENST00000454852 GIGYF2Q6Y7W6 1299 aaKnown RBP14.29□□□□□ -0.12
TRAF4-206ENST00000454852 METTL22Q9BUU2 404 aaPredicted RBP14.29□□□□□ -0.12
TRAF4-206ENST00000454852 MAP3K2Q9Y2U5 619 aa14.29□□□□□ -0.12
TRAF4-206ENST00000454852 ANKRD36CQ5JPF3 1778 aa14.29□□□□□ -0.12
TRAF4-206ENST00000454852 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.28□□□□□ -0.12
TRAF4-206ENST00000454852 CCT4P50991 539 aaKnown RBP14.28□□□□□ -0.12
TRAF4-206ENST00000454852 NUP98P52948 1817 aa14.28□□□□□ -0.12
TRAF4-206ENST00000454852 TRIM28Q13263 835 aaKnown RBP14.28□□□□□ -0.12
TRAF4-206ENST00000454852 HSP90AB3PQ58FF7 597 aa14.28□□□□□ -0.12
TRAF4-206ENST00000454852 BEND3Q5T5X7 828 aa14.28□□□□□ -0.12
TRAF4-206ENST00000454852 RIC3Q7Z5B4 369 aa14.28□□□□□ -0.12
TRAF4-206ENST00000454852 ARHGEF1Q92888 912 aaKnown RBP14.28□□□□□ -0.12
TRAF4-206ENST00000454852 USP42Q9H9J4 1324 aaKnown RBP14.28□□□□□ -0.12
TRAF4-206ENST00000454852 ANO8Q9HCE9 1232 aaPredicted RBP14.28□□□□□ -0.12
TRAF4-206ENST00000454852 STK32BQ9NY57 414 aa14.28□□□□□ -0.12
TRAF4-206ENST00000454852 F6X3S4 739 aa14.27□□□□□ -0.13
TRAF4-206ENST00000454852 ALDH1L1O75891 902 aa14.27□□□□□ -0.13
TRAF4-206ENST00000454852 RLBP1P12271 317 aa14.27□□□□□ -0.13
TRAF4-206ENST00000454852 TCIRG1Q13488 830 aa14.27□□□□□ -0.13
TRAF4-206ENST00000454852 FTSJ3Q8IY81 847 aaKnown RBP14.27□□□□□ -0.13
TRAF4-206ENST00000454852 LINS1Q8NG48 757 aa14.27□□□□□ -0.13
TRAF4-206ENST00000454852 ISCA1Q9BUE6 129 aa14.27□□□□□ -0.13
TRAF4-206ENST00000454852 TBC1D2BQ9UPU7 963 aa14.27□□□□□ -0.13
TRAF4-206ENST00000454852 TNNQ9UQP3 1299 aa14.27□□□□□ -0.13
TRAF4-206ENST00000454852 PNPLA7Q6ZV29 1317 aa14.26□□□□□ -0.13
TRAF4-206ENST00000454852 C20orf194Q5TEA3 1177 aa14.26□□□□□ -0.13
TRAF4-206ENST00000454852 TMEM57Q8N5G2 664 aa14.26□□□□□ -0.13
TRAF4-206ENST00000454852 PANK1Q8TE04 598 aa14.26□□□□□ -0.13
TRAF4-206ENST00000454852 BCL2L12Q9HB09 334 aa14.26□□□□□ -0.13
TRAF4-206ENST00000454852 TFCP2L1Q9NZI6 479 aa14.26□□□□□ -0.13
TRAF4-206ENST00000454852 ZNF652Q9Y2D9 606 aa14.26□□□□□ -0.13
TRAF4-206ENST00000454852 ZNF330Q9Y3S2 320 aaPredicted RBP14.26□□□□□ -0.13
TRAF4-206ENST00000454852 IGKV5-2P06315 115 aa14.25□□□□□ -0.13
TRAF4-206ENST00000454852 RFC4P35249 363 aa14.25□□□□□ -0.13
TRAF4-206ENST00000454852 NEXNQ0ZGT2 675 aa14.25□□□□□ -0.13
TRAF4-206ENST00000454852 MVPQ14764 893 aaKnown RBP14.25□□□□□ -0.13
TRAF4-206ENST00000454852 HLFQ16534 295 aa14.25□□□□□ -0.13
TRAF4-206ENST00000454852 ZNF34Q8IZ26 560 aa14.25□□□□□ -0.13
TRAF4-206ENST00000454852 CLUAP1Q96AJ1 413 aa14.25□□□□□ -0.13
TRAF4-206ENST00000454852 ZBTB3Q9H5J0 574 aa14.25□□□□□ -0.13
TRAF4-206ENST00000454852 ZPR1O75312 459 aa14.24□□□□□ -0.13
TRAF4-206ENST00000454852 AAMPQ13685 434 aa14.24□□□□□ -0.13
TRAF4-206ENST00000454852 COL23A1Q86Y22 540 aaPredicted RBP14.24□□□□□ -0.13
TRAF4-206ENST00000454852 SRCIN1Q9C0H9 1055 aa14.24□□□□□ -0.13
TRAF4-206ENST00000454852 DDX19BQ9UMR2 479 aa14.24□□□□□ -0.13
TRAF4-206ENST00000454852 COL24A1Q17RW2 1714 aa14.24□□□□□ -0.13
TRAF4-206ENST00000454852 UTYO14607 1347 aa14.23□□□□□ -0.13
TRAF4-206ENST00000454852 NEURL1BA8MQ27 555 aa14.23□□□□□ -0.13
TRAF4-206ENST00000454852 ERICH6BQ5W0A0 696 aa14.23□□□□□ -0.13
TRAF4-206ENST00000454852 CCDC191Q8NCU4 936 aa14.23□□□□□ -0.13
TRAF4-206ENST00000454852 MYD88Q99836 296 aa14.23□□□□□ -0.13
TRAF4-206ENST00000454852 CHMP4BQ9H444 224 aaKnown RBP14.23□□□□□ -0.13
TRAF4-206ENST00000454852 ZBTB7BO15156 539 aaPredicted RBP14.22□□□□□ -0.13
TRAF4-206ENST00000454852 PHF14O94880 888 aa14.22□□□□□ -0.13
TRAF4-206ENST00000454852 GYS1P13807 737 aa14.22□□□□□ -0.13
TRAF4-206ENST00000454852 PARP10Q53GL7 1025 aa14.22□□□□□ -0.13
TRAF4-206ENST00000454852 USPL1Q5W0Q7 1092 aa14.22□□□□□ -0.13
TRAF4-206ENST00000454852 SLC4A10Q6U841 1118 aa14.22□□□□□ -0.13
TRAF4-206ENST00000454852 AFDNP55196 1824 aaKnown RBP14.22□□□□□ -0.13
TRAF4-206ENST00000454852 CASZ1Q86V15 1759 aa14.22□□□□□ -0.13
TRAF4-206ENST00000454852 GCKRQ14397 625 aa14.21□□□□□ -0.13
TRAF4-206ENST00000454852 SMIM5Q71RC9 77 aa14.21□□□□□ -0.13
TRAF4-206ENST00000454852 NLRP10Q86W26 655 aa14.21□□□□□ -0.13
TRAF4-206ENST00000454852 SLC16A10Q8TF71 515 aa14.21□□□□□ -0.13
TRAF4-206ENST00000454852 SRP68Q9UHB9 627 aaKnown RBP14.21□□□□□ -0.13
TRAF4-206ENST00000454852 COG6Q9Y2V7 657 aa14.21□□□□□ -0.13
TRAF4-206ENST00000454852 UBN2Q6ZU65 1347 aa14.2□□□□□ -0.14
TRAF4-206ENST00000454852 CWF19L2Q2TBE0 894 aaKnown RBP14.2□□□□□ -0.14
TRAF4-206ENST00000454852 ITPRIPQ8IWB1 547 aa14.2□□□□□ -0.14
TRAF4-206ENST00000454852 NLGN1Q8N2Q7 840 aa14.2□□□□□ -0.14
TRAF4-206ENST00000454852 ARXQ96QS3 562 aa14.2□□□□□ -0.14
TRAF4-206ENST00000454852 CRBNQ96SW2 442 aa14.2□□□□□ -0.14
TRAF4-206ENST00000454852 USP44Q9H0E7 712 aa14.2□□□□□ -0.14
TRAF4-206ENST00000454852 CWC25Q9NXE8 425 aaPredicted RBP14.2□□□□□ -0.14
TRAF4-206ENST00000454852 ATP5J2-PTCD1G3V325 749 aa14.19□□□□□ -0.14
TRAF4-206ENST00000454852 H7C1W4 665 aa14.19□□□□□ -0.14
TRAF4-206ENST00000454852 GRM8O00222 908 aa14.19□□□□□ -0.14
TRAF4-206ENST00000454852 NEFLP07196 543 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms