RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 TMEM88BA6NKF7 163 aa13.39□□□□□ -0.27
CLCN4-204ENST00000454850 DIAPH1O60610 1272 aaKnown RBP13.39□□□□□ -0.27
CLCN4-204ENST00000454850 CAMTA2O94983 1202 aa13.39□□□□□ -0.27
CLCN4-204ENST00000454850 A1BGP04217 495 aa13.39□□□□□ -0.27
CLCN4-204ENST00000454850 IL6STP40189 918 aaPredicted RBP13.39□□□□□ -0.27
CLCN4-204ENST00000454850 PIP4K2AP48426 406 aaPredicted RBP13.39□□□□□ -0.27
CLCN4-204ENST00000454850 CTCFP49711 727 aaPredicted RBP13.39□□□□□ -0.27
CLCN4-204ENST00000454850 AMER1Q5JTC6 1135 aaPredicted RBP13.39□□□□□ -0.27
CLCN4-204ENST00000454850 SOGA3Q5TF21 947 aa13.39□□□□□ -0.27
CLCN4-204ENST00000454850 ZNF790Q6PG37 636 aa13.39□□□□□ -0.27
CLCN4-204ENST00000454850 MASTLQ96GX5 879 aa13.39□□□□□ -0.27
CLCN4-204ENST00000454850 ADAMTSL1Q8N6G6 1762 aa13.39□□□□□ -0.27
CLCN4-204ENST00000454850 ZNF541Q9H0D2 1346 aa13.39□□□□□ -0.27
CLCN4-204ENST00000454850 LBX1P52954 281 aa13.38□□□□□ -0.27
CLCN4-204ENST00000454850 TRIM26Q12899 539 aaPredicted RBP13.38□□□□□ -0.27
CLCN4-204ENST00000454850 DZIP3Q86Y13 1208 aaKnown RBP13.38□□□□□ -0.27
CLCN4-204ENST00000454850 L3MBTL3Q96JM7 780 aaPredicted RBP13.38□□□□□ -0.27
CLCN4-204ENST00000454850 TEX13AQ9BXU3 409 aaPredicted RBP13.38□□□□□ -0.27
CLCN4-204ENST00000454850 ZNF277Q9NRM2 450 aaPredicted RBP13.38□□□□□ -0.27
CLCN4-204ENST00000454850 GNAT3A8MTJ3 354 aa13.37□□□□□ -0.27
CLCN4-204ENST00000454850 CNGB1Q14028 1251 aaPredicted RBP13.37□□□□□ -0.27
CLCN4-204ENST00000454850 CCDC93Q567U6 631 aa13.37□□□□□ -0.27
CLCN4-204ENST00000454850 OLFM4Q6UX06 510 aa13.37□□□□□ -0.27
CLCN4-204ENST00000454850 NBPF5PQ86XG9 351 aaPredicted RBP13.37□□□□□ -0.27
CLCN4-204ENST00000454850 IL17REQ8NFR9 667 aa13.37□□□□□ -0.27
CLCN4-204ENST00000454850 FMNL2Q96PY5 1086 aa13.37□□□□□ -0.27
CLCN4-204ENST00000454850 PCGF6Q9BYE7 350 aa13.37□□□□□ -0.27
CLCN4-204ENST00000454850 TRPM7Q96QT4 1865 aa13.37□□□□□ -0.27
CLCN4-204ENST00000454850 U2SURPO15042 1029 aaKnown RBP13.36□□□□□ -0.27
CLCN4-204ENST00000454850 ITGBL1O95965 494 aaPredicted RBP13.36□□□□□ -0.27
CLCN4-204ENST00000454850 CC2D1BQ5T0F9 858 aaKnown RBP13.36□□□□□ -0.27
CLCN4-204ENST00000454850 HACL1Q9UJ83 578 aa13.36□□□□□ -0.27
CLCN4-204ENST00000454850 RNF123Q5XPI4 1314 aa13.36□□□□□ -0.27
CLCN4-204ENST00000454850 COL3A1P02461 1466 aaPredicted RBP13.36□□□□□ -0.27
CLCN4-204ENST00000454850 FAM177BA6PVY3 158 aa13.35□□□□□ -0.27
CLCN4-204ENST00000454850 KCNQ3O43525 872 aa13.35□□□□□ -0.27
CLCN4-204ENST00000454850 EPHX2P34913 555 aa13.35□□□□□ -0.27
CLCN4-204ENST00000454850 FKBP4Q02790 459 aaKnown RBP eCLIP13.35□□□□□ -0.27
CLCN4-204ENST00000454850 MAP1SQ66K74 1059 aaPredicted RBP13.35□□□□□ -0.27
CLCN4-204ENST00000454850 GAS2L2Q8NHY3 880 aa13.35□□□□□ -0.27
CLCN4-204ENST00000454850 WBP1LQ9NX94 342 aa13.35□□□□□ -0.27
CLCN4-204ENST00000454850 NPR1P16066 1061 aa13.34□□□□□ -0.27
CLCN4-204ENST00000454850 C7orf43Q8WVR3 580 aa13.34□□□□□ -0.27
CLCN4-204ENST00000454850 ABT1Q9ULW3 272 aaKnown RBP13.34□□□□□ -0.27
CLCN4-204ENST00000454850 PRAMEF22A3QJZ6 481 aa13.33□□□□□ -0.28
CLCN4-204ENST00000454850 BTBD11A6QL63 1104 aa13.33□□□□□ -0.28
CLCN4-204ENST00000454850 HSPA8P11142 646 aaKnown RBP13.33□□□□□ -0.28
CLCN4-204ENST00000454850 DEFB115Q30KQ5 88 aa13.33□□□□□ -0.28
CLCN4-204ENST00000454850 FAM161AQ3B820 660 aa13.33□□□□□ -0.28
CLCN4-204ENST00000454850 USP16Q9Y5T5 823 aa13.33□□□□□ -0.28
CLCN4-204ENST00000454850 NUP98P52948 1817 aa13.33□□□□□ -0.28
CLCN4-204ENST00000454850 GRM1Q13255 1194 aa13.32□□□□□ -0.28
CLCN4-204ENST00000454850 PAXIP1Q6ZW49 1069 aaPredicted RBP13.32□□□□□ -0.28
CLCN4-204ENST00000454850 CNTROBQ8N137 903 aa13.32□□□□□ -0.28
CLCN4-204ENST00000454850 ABHD8Q96I13 439 aa13.32□□□□□ -0.28
CLCN4-204ENST00000454850 ZNF652Q9Y2D9 606 aa13.32□□□□□ -0.28
CLCN4-204ENST00000454850 LTBP1Q14766 1721 aa13.32□□□□□ -0.28
CLCN4-204ENST00000454850 KIF7Q2M1P5 1343 aa13.32□□□□□ -0.28
CLCN4-204ENST00000454850 LAMB4A4D0S4 1761 aa13.32□□□□□ -0.28
CLCN4-204ENST00000454850 RASSF10A6NK89 507 aa13.31□□□□□ -0.28
CLCN4-204ENST00000454850 IARSP41252 1262 aaKnown RBP13.31□□□□□ -0.28
CLCN4-204ENST00000454850 PNMA8AQ86V59 439 aaPredicted RBP13.31□□□□□ -0.28
CLCN4-204ENST00000454850 RTKN2Q8IZC4 609 aa13.31□□□□□ -0.28
CLCN4-204ENST00000454850 SYNE4Q8N205 404 aa13.31□□□□□ -0.28
CLCN4-204ENST00000454850 NIP7Q9Y221 180 aaKnown RBP eCLIP13.31□□□□□ -0.28
CLCN4-204ENST00000454850 GJA3Q9Y6H8 435 aa13.31□□□□□ -0.28
CLCN4-204ENST00000454850 WDR33Q9C0J8 1336 aaKnown RBP13.31□□□□□ -0.28
CLCN4-204ENST00000454850 CLSPNQ9HAW4 1339 aa13.31□□□□□ -0.28
CLCN4-204ENST00000454850 THSD7BQ9C0I4 1608 aa13.31□□□□□ -0.28
CLCN4-204ENST00000454850 CEMIPQ8WUJ3 1361 aa13.31□□□□□ -0.28
CLCN4-204ENST00000454850 CASP8AP2Q9UKL3 1982 aa13.31□□□□□ -0.28
CLCN4-204ENST00000454850 MAP2K1Q02750 393 aaPredicted RBP13.3□□□□□ -0.28
CLCN4-204ENST00000454850 CLEC4GQ6UXB4 293 aa13.3□□□□□ -0.28
CLCN4-204ENST00000454850 COL4A5P29400 1685 aa13.3□□□□□ -0.28
CLCN4-204ENST00000454850 FZD9O00144 591 aa13.29□□□□□ -0.28
CLCN4-204ENST00000454850 GTF2E1P29083 439 aaPredicted RBP13.29□□□□□ -0.28
CLCN4-204ENST00000454850 FMR1Q06787 632 aaKnown RBP eCLIP13.29□□□□□ -0.28
CLCN4-204ENST00000454850 TPTE2Q6XPS3 522 aa13.29□□□□□ -0.28
CLCN4-204ENST00000454850 GPC2Q8N158 579 aa13.29□□□□□ -0.28
CLCN4-204ENST00000454850 PHACTR3Q96KR7 559 aa13.29□□□□□ -0.28
CLCN4-204ENST00000454850 KLRG2A4D1S0 409 aaPredicted RBP13.28□□□□□ -0.28
CLCN4-204ENST00000454850 SLC34A2O95436 690 aa13.28□□□□□ -0.28
CLCN4-204ENST00000454850 PRKAR2BP31323 418 aa13.28□□□□□ -0.28
CLCN4-204ENST00000454850 JDP2Q8WYK2 163 aa13.28□□□□□ -0.28
CLCN4-204ENST00000454850 DDX21Q9NR30 783 aaKnown RBP eCLIP13.28□□□□□ -0.28
CLCN4-204ENST00000454850 CCDC85CA6NKD9 419 aa13.27□□□□□ -0.29
CLCN4-204ENST00000454850 NBPF26B4DH59 902 aa13.27□□□□□ -0.29
CLCN4-204ENST00000454850 SNRPA1P09661 255 aaKnown RBP13.27□□□□□ -0.29
CLCN4-204ENST00000454850 LMOD1P29536 600 aaPredicted RBP13.27□□□□□ -0.29
CLCN4-204ENST00000454850 ALDH1B1P30837 517 aa13.27□□□□□ -0.29
CLCN4-204ENST00000454850 EIF6P56537 245 aaKnown RBP13.27□□□□□ -0.29
CLCN4-204ENST00000454850 CYP4F22Q6NT55 531 aa13.27□□□□□ -0.29
CLCN4-204ENST00000454850 NBPF10Q6P3W6 841 aaKnown RBP13.27□□□□□ -0.29
CLCN4-204ENST00000454850 MCM10Q7L590 875 aa13.27□□□□□ -0.29
CLCN4-204ENST00000454850 NBPF15Q8N660 670 aa13.27□□□□□ -0.29
CLCN4-204ENST00000454850 CAPNS2Q96L46 248 aa13.27□□□□□ -0.29
CLCN4-204ENST00000454850 BEGAINQ9BUH8 593 aa13.27□□□□□ -0.29
CLCN4-204ENST00000454850 ABCC12Q96J65 1359 aa13.27□□□□□ -0.29
CLCN4-204ENST00000454850 TNRC18O15417 2968 aaPredicted RBP13.27□□□□□ -0.29
CLCN4-204ENST00000454850 DLG5Q8TDM6 1919 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms