RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 LOC102724428A0A0B4J2F2 783 aa16.33■□□□□ 0.21
LINC00343-203ENST00000454555 HOXB7P09629 217 aa16.33■□□□□ 0.21
LINC00343-203ENST00000454555 SNRPA1P09661 255 aaKnown RBP16.33■□□□□ 0.21
LINC00343-203ENST00000454555 SIK1P57059 783 aa16.33■□□□□ 0.21
LINC00343-203ENST00000454555 TNPO1Q92973 898 aaKnown RBP16.33■□□□□ 0.21
LINC00343-203ENST00000454555 RBM42Q9BTD8 480 aaKnown RBP16.33■□□□□ 0.21
LINC00343-203ENST00000454555 KRT24Q2M2I5 525 aa16.33■□□□□ 0.2
LINC00343-203ENST00000454555 TBC1D9Q6ZT07 1266 aa16.33■□□□□ 0.2
LINC00343-203ENST00000454555 ILDR2Q71H61 639 aa16.33■□□□□ 0.2
LINC00343-203ENST00000454555 SLC4A9Q96Q91 983 aa16.33■□□□□ 0.2
LINC00343-203ENST00000454555 KIF2CQ99661 725 aa16.33■□□□□ 0.2
LINC00343-203ENST00000454555 RRAGDQ9NQL2 400 aaPredicted RBP16.33■□□□□ 0.2
LINC00343-203ENST00000454555 TNS1Q9HBL0 1735 aaKnown RBP16.32■□□□□ 0.2
LINC00343-203ENST00000454555 HSP90AA1P07900 732 aaKnown RBP16.32■□□□□ 0.2
LINC00343-203ENST00000454555 TWISTNBQ3B726 338 aaPredicted RBP16.32■□□□□ 0.2
LINC00343-203ENST00000454555 TEX13AQ9BXU3 409 aaPredicted RBP16.32■□□□□ 0.2
LINC00343-203ENST00000454555 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.32■□□□□ 0.2
LINC00343-203ENST00000454555 SF3B2Q13435 895 aaKnown RBP16.31■□□□□ 0.2
LINC00343-203ENST00000454555 RABEP1Q15276 862 aa16.31■□□□□ 0.2
LINC00343-203ENST00000454555 TSPYL6Q8N831 410 aa16.31■□□□□ 0.2
LINC00343-203ENST00000454555 ATP6V1AP38606 617 aa16.31■□□□□ 0.2
LINC00343-203ENST00000454555 SLC27A3Q5K4L6 730 aa16.31■□□□□ 0.2
LINC00343-203ENST00000454555 ZNF831Q5JPB2 1677 aa16.3■□□□□ 0.2
LINC00343-203ENST00000454555 ELL2O00472 640 aaPredicted RBP16.3■□□□□ 0.2
LINC00343-203ENST00000454555 CHMP4AQ9BY43 222 aa16.3■□□□□ 0.2
LINC00343-203ENST00000454555 LY75O60449 1722 aa16.29■□□□□ 0.2
LINC00343-203ENST00000454555 PRAMEF22A3QJZ6 481 aa16.29■□□□□ 0.2
LINC00343-203ENST00000454555 HMGB2P26583 209 aaKnown RBP16.29■□□□□ 0.2
LINC00343-203ENST00000454555 INTS3Q68E01 1043 aaKnown RBP16.29■□□□□ 0.2
LINC00343-203ENST00000454555 GZF1Q9H116 711 aaPredicted RBP16.29■□□□□ 0.2
LINC00343-203ENST00000454555 DCTPP1Q9H773 170 aa16.29■□□□□ 0.2
LINC00343-203ENST00000454555 CCNL1Q9UK58 526 aaPredicted RBP16.29■□□□□ 0.2
LINC00343-203ENST00000454555 USP16Q9Y5T5 823 aa16.29■□□□□ 0.2
LINC00343-203ENST00000454555 EP400Q96L91 3159 aa16.29■□□□□ 0.2
LINC00343-203ENST00000454555 CICQ96RK0 1608 aaPredicted RBP16.29■□□□□ 0.2
LINC00343-203ENST00000454555 BAG6P46379 1132 aa16.28■□□□□ 0.2
LINC00343-203ENST00000454555 TXNRD1Q16881 649 aa16.28■□□□□ 0.2
LINC00343-203ENST00000454555 DNAJC10Q8IXB1 793 aa16.28■□□□□ 0.2
LINC00343-203ENST00000454555 RPAP2Q8IXW5 612 aaPredicted RBP16.28■□□□□ 0.2
LINC00343-203ENST00000454555 PROM2Q8N271 834 aa16.28■□□□□ 0.2
LINC00343-203ENST00000454555 UPF1Q92900 1129 aaKnown RBP eCLIP16.28■□□□□ 0.2
LINC00343-203ENST00000454555 CAMKK2Q96RR4 588 aa16.28■□□□□ 0.2
LINC00343-203ENST00000454555 NUCB2P80303 420 aa16.28■□□□□ 0.2
LINC00343-203ENST00000454555 ITPK1Q13572 414 aa16.28■□□□□ 0.2
LINC00343-203ENST00000454555 CASC1Q6TDU7 716 aa16.28■□□□□ 0.2
LINC00343-203ENST00000454555 RGPD3A6NKT7 1758 aaPredicted RBP16.27■□□□□ 0.2
LINC00343-203ENST00000454555 RGPD4Q7Z3J3 1758 aa16.27■□□□□ 0.2
LINC00343-203ENST00000454555 PTPRCP08575 1304 aa16.27■□□□□ 0.2
LINC00343-203ENST00000454555 SIRT2Q8IXJ6 389 aa16.27■□□□□ 0.2
LINC00343-203ENST00000454555 STARD3NLO95772 234 aa16.26■□□□□ 0.19
LINC00343-203ENST00000454555 CYP19A1P11511 503 aaPredicted RBP16.26■□□□□ 0.19
LINC00343-203ENST00000454555 HDGFL1Q5TGJ6 251 aa16.26■□□□□ 0.19
LINC00343-203ENST00000454555 CWC22Q9HCG8 908 aaKnown RBP16.26■□□□□ 0.19
LINC00343-203ENST00000454555 LRRC4BQ9NT99 713 aa16.26■□□□□ 0.19
LINC00343-203ENST00000454555 PRKCSHP14314 528 aaPredicted RBP16.26■□□□□ 0.19
LINC00343-203ENST00000454555 EN1Q05925 392 aaPredicted RBP16.26■□□□□ 0.19
LINC00343-203ENST00000454555 KLHL40Q2TBA0 621 aa16.26■□□□□ 0.19
LINC00343-203ENST00000454555 TTC22Q5TAA0 569 aa16.26■□□□□ 0.19
LINC00343-203ENST00000454555 ANKRD44Q8N8A2 993 aa16.26■□□□□ 0.19
LINC00343-203ENST00000454555 TRIM44Q96DX7 344 aaPredicted RBP16.26■□□□□ 0.19
LINC00343-203ENST00000454555 TJP1Q07157 1748 aa16.25■□□□□ 0.19
LINC00343-203ENST00000454555 ERBB4Q15303 1308 aa16.25■□□□□ 0.19
LINC00343-203ENST00000454555 EIF2S2P20042 333 aaKnown RBP16.25■□□□□ 0.19
LINC00343-203ENST00000454555 CCDC30Q5VVM6 783 aa16.25■□□□□ 0.19
LINC00343-203ENST00000454555 PLEKHM2Q8IWE5 1019 aa16.25■□□□□ 0.19
LINC00343-203ENST00000454555 PANK2Q9BZ23 570 aa16.25■□□□□ 0.19
LINC00343-203ENST00000454555 C5P01031 1676 aa16.24■□□□□ 0.19
LINC00343-203ENST00000454555 KCNQ4P56696 695 aa16.24■□□□□ 0.19
LINC00343-203ENST00000454555 EZH2Q15910 746 aaKnown RBP16.24■□□□□ 0.19
LINC00343-203ENST00000454555 DEFB132Q7Z7B7 95 aa16.24■□□□□ 0.19
LINC00343-203ENST00000454555 LINC00116Q8NCU8 138 aa16.24■□□□□ 0.19
LINC00343-203ENST00000454555 ESPNB1AK53 854 aa16.23■□□□□ 0.19
LINC00343-203ENST00000454555 CCDC173Q0VFZ6 552 aa16.23■□□□□ 0.19
LINC00343-203ENST00000454555 RC3H1Q5TC82 1133 aaKnown RBP16.23■□□□□ 0.19
LINC00343-203ENST00000454555 ANP32BQ92688 251 aaKnown RBP16.23■□□□□ 0.19
LINC00343-203ENST00000454555 LAMB4A4D0S4 1761 aa16.23■□□□□ 0.19
LINC00343-203ENST00000454555 CNTNAP4Q9C0A0 1308 aa16.23■□□□□ 0.19
LINC00343-203ENST00000454555 ATP10DQ9P241 1426 aa16.23■□□□□ 0.19
LINC00343-203ENST00000454555 DBF4Q9UBU7 674 aaPredicted RBP16.23■□□□□ 0.19
LINC00343-203ENST00000454555 CRKLP46109 303 aaKnown RBP16.22■□□□□ 0.19
LINC00343-203ENST00000454555 PDIA6Q15084 440 aa16.22■□□□□ 0.19
LINC00343-203ENST00000454555 INTS5Q6P9B9 1019 aaKnown RBP16.22■□□□□ 0.19
LINC00343-203ENST00000454555 DDX21Q9NR30 783 aaKnown RBP eCLIP16.22■□□□□ 0.19
LINC00343-203ENST00000454555 REC8O95072 547 aa16.21■□□□□ 0.19
LINC00343-203ENST00000454555 A1BGP04217 495 aa16.21■□□□□ 0.19
LINC00343-203ENST00000454555 GSPT1P15170 499 aaKnown RBP16.21■□□□□ 0.19
LINC00343-203ENST00000454555 UBE2Q2Q8WVN8 375 aa16.21■□□□□ 0.19
LINC00343-203ENST00000454555 NECTIN2Q92692 538 aa16.21■□□□□ 0.19
LINC00343-203ENST00000454555 STK31Q9BXU1 1019 aa16.21■□□□□ 0.19
LINC00343-203ENST00000454555 C1orf115Q9H7X2 142 aa16.21■□□□□ 0.19
LINC00343-203ENST00000454555 CCDC87Q9NVE4 849 aa16.21■□□□□ 0.19
LINC00343-203ENST00000454555 COL5A3P25940 1745 aaPredicted RBP16.21■□□□□ 0.19
LINC00343-203ENST00000454555 NBPF26B4DH59 902 aa16.21■□□□□ 0.18
LINC00343-203ENST00000454555 ST18O60284 1047 aa16.21■□□□□ 0.18
LINC00343-203ENST00000454555 HMMRO75330 724 aa16.21■□□□□ 0.18
LINC00343-203ENST00000454555 NBPF14Q5TI25 921 aa16.21■□□□□ 0.18
LINC00343-203ENST00000454555 NBPF10Q6P3W6 841 aaKnown RBP16.21■□□□□ 0.18
LINC00343-203ENST00000454555 NBPF15Q8N660 670 aa16.21■□□□□ 0.18
LINC00343-203ENST00000454555 PPP1R9BQ96SB3 815 aa16.2■□□□□ 0.18
LINC00343-203ENST00000454555 USP26Q9BXU7 913 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms