RNA–Protein interactions for RNA: ENST00000454477.1

LINC01875-201, Transcript of long intergenic non-protein coding RNA 1875, humanhuman

TSL 1 (best) BASIC

Gene LINC01875, Length 660 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01875-201ENST00000454477 ZNF496Q96IT1 587 aaPredicted RBP16.85■□□□□ 0.29
LINC01875-201ENST00000454477 HEG1Q9ULI3 1381 aa16.85■□□□□ 0.29
LINC01875-201ENST00000454477 ZNF831Q5JPB2 1677 aa16.85■□□□□ 0.29
LINC01875-201ENST00000454477 SNRPA1P09661 255 aaKnown RBP16.84■□□□□ 0.29
LINC01875-201ENST00000454477 LDHDQ86WU2 507 aa16.84■□□□□ 0.29
LINC01875-201ENST00000454477 BABAM1Q9NWV8 329 aa16.84■□□□□ 0.29
LINC01875-201ENST00000454477 ANP32CO43423 234 aa16.83■□□□□ 0.28
LINC01875-201ENST00000454477 ITGBL1O95965 494 aaPredicted RBP16.83■□□□□ 0.28
LINC01875-201ENST00000454477 RIPK4P57078 832 aa16.83■□□□□ 0.28
LINC01875-201ENST00000454477 RUNDC1Q96C34 613 aa16.83■□□□□ 0.28
LINC01875-201ENST00000454477 PARP3Q9Y6F1 533 aa16.83■□□□□ 0.28
LINC01875-201ENST00000454477 SOS1Q07889 1333 aaPredicted RBP16.82■□□□□ 0.28
LINC01875-201ENST00000454477 CA12O43570 354 aa16.82■□□□□ 0.28
LINC01875-201ENST00000454477 SCN11AQ9UI33 1791 aa16.82■□□□□ 0.28
LINC01875-201ENST00000454477 USP42Q9H9J4 1324 aaKnown RBP16.81■□□□□ 0.28
LINC01875-201ENST00000454477 GYS1P13807 737 aa16.81■□□□□ 0.28
LINC01875-201ENST00000454477 IL6STP40189 918 aaPredicted RBP16.81■□□□□ 0.28
LINC01875-201ENST00000454477 NBPF15Q8N660 670 aa16.81■□□□□ 0.28
LINC01875-201ENST00000454477 NARFQ9UHQ1 456 aa16.81■□□□□ 0.28
LINC01875-201ENST00000454477 CANXP27824 592 aaKnown RBP16.8■□□□□ 0.28
LINC01875-201ENST00000454477 TMPOP42166 694 aaKnown RBP16.8■□□□□ 0.28
LINC01875-201ENST00000454477 DCTN1Q14203 1278 aa16.8■□□□□ 0.28
LINC01875-201ENST00000454477 ZNF219Q9P2Y4 722 aaPredicted RBP16.8■□□□□ 0.28
LINC01875-201ENST00000454477 TSKSQ9UJT2 592 aa16.8■□□□□ 0.28
LINC01875-201ENST00000454477 ZBTB1Q9Y2K1 713 aa16.8■□□□□ 0.28
LINC01875-201ENST00000454477 CUL9Q8IWT3 2517 aa16.8■□□□□ 0.28
LINC01875-201ENST00000454477 ADAMTS7Q9UKP4 1686 aa16.8■□□□□ 0.28
LINC01875-201ENST00000454477 CASP8AP2Q9UKL3 1982 aa16.8■□□□□ 0.28
LINC01875-201ENST00000454477 FXR1P51114 621 aaKnown RBP eCLIP16.79■□□□□ 0.28
LINC01875-201ENST00000454477 ECE1P42892 770 aa16.78■□□□□ 0.28
LINC01875-201ENST00000454477 EIF5P55010 431 aaKnown RBP16.78■□□□□ 0.28
LINC01875-201ENST00000454477 ADAMTS8Q9UP79 889 aa16.78■□□□□ 0.28
LINC01875-201ENST00000454477 CCDC88AQ3V6T2 1871 aa16.78■□□□□ 0.28
LINC01875-201ENST00000454477 COL15A1P39059 1388 aa16.77■□□□□ 0.28
LINC01875-201ENST00000454477 CALD1Q05682 793 aaKnown RBP16.77■□□□□ 0.28
LINC01875-201ENST00000454477 A0A0C4DFX4 3053 aa16.77■□□□□ 0.27
LINC01875-201ENST00000454477 RGL2O15211 777 aa16.76■□□□□ 0.27
LINC01875-201ENST00000454477 KCNQ3O43525 872 aa16.76■□□□□ 0.27
LINC01875-201ENST00000454477 USPL1Q5W0Q7 1092 aa16.76■□□□□ 0.27
LINC01875-201ENST00000454477 CAPNS2Q96L46 248 aa16.76■□□□□ 0.27
LINC01875-201ENST00000454477 GPR101Q96P66 508 aaPredicted RBP16.76■□□□□ 0.27
LINC01875-201ENST00000454477 TSPYL4Q9UJ04 414 aa16.76■□□□□ 0.27
LINC01875-201ENST00000454477 ABT1Q9ULW3 272 aaKnown RBP16.76■□□□□ 0.27
LINC01875-201ENST00000454477 PITPNM2Q9BZ72 1349 aa16.75■□□□□ 0.27
LINC01875-201ENST00000454477 IQCA1LA6NCM1 817 aa16.75■□□□□ 0.27
LINC01875-201ENST00000454477 FKBP8Q14318 412 aa16.75■□□□□ 0.27
LINC01875-201ENST00000454477 SRP68Q9UHB9 627 aaKnown RBP16.75■□□□□ 0.27
LINC01875-201ENST00000454477 A1BGP04217 495 aa16.74■□□□□ 0.27
LINC01875-201ENST00000454477 TM4SF1P30408 202 aa16.74■□□□□ 0.27
LINC01875-201ENST00000454477 CHRNA5P30532 468 aa16.74■□□□□ 0.27
LINC01875-201ENST00000454477 CCDC146Q8IYE0 955 aa16.74■□□□□ 0.27
LINC01875-201ENST00000454477 ZNF652Q9Y2D9 606 aa16.74■□□□□ 0.27
LINC01875-201ENST00000454477 ZNF330Q9Y3S2 320 aaPredicted RBP16.74■□□□□ 0.27
LINC01875-201ENST00000454477 USP16Q9Y5T5 823 aa16.74■□□□□ 0.27
LINC01875-201ENST00000454477 MAP2K2P36507 400 aa16.73■□□□□ 0.27
LINC01875-201ENST00000454477 EIF4A1P60842 406 aaKnown RBP16.73■□□□□ 0.27
LINC01875-201ENST00000454477 NEUROD2Q15784 382 aa16.73■□□□□ 0.27
LINC01875-201ENST00000454477 CLEC4GQ6UXB4 293 aa16.73■□□□□ 0.27
LINC01875-201ENST00000454477 MIS18AQ9NYP9 233 aa16.73■□□□□ 0.27
LINC01875-201ENST00000454477 PDZRN3Q9UPQ7 1066 aa16.73■□□□□ 0.27
LINC01875-201ENST00000454477 SCN4AP35499 1836 aa16.73■□□□□ 0.27
LINC01875-201ENST00000454477 DICER1Q9UPY3 1922 aaKnown RBP16.72■□□□□ 0.27
LINC01875-201ENST00000454477 NFKBIEO00221 500 aa16.72■□□□□ 0.27
LINC01875-201ENST00000454477 CHMP4AQ9BY43 222 aa16.72■□□□□ 0.27
LINC01875-201ENST00000454477 ERBB4Q15303 1308 aa16.71■□□□□ 0.27
LINC01875-201ENST00000454477 DZIP3Q86Y13 1208 aaKnown RBP16.71■□□□□ 0.27
LINC01875-201ENST00000454477 THUMPD2Q9BTF0 503 aaKnown RBP16.71■□□□□ 0.27
LINC01875-201ENST00000454477 TAF1DQ9H5J8 278 aaPredicted RBP16.71■□□□□ 0.27
LINC01875-201ENST00000454477 ADAMTSL1Q8N6G6 1762 aa16.71■□□□□ 0.27
LINC01875-201ENST00000454477 POLRMTO00411 1230 aaKnown RBP16.7■□□□□ 0.26
LINC01875-201ENST00000454477 NFIXQ14938 502 aa16.7■□□□□ 0.26
LINC01875-201ENST00000454477 SLC17A8Q8NDX2 589 aa16.7■□□□□ 0.26
LINC01875-201ENST00000454477 SETDB2Q96T68 719 aa16.7■□□□□ 0.26
LINC01875-201ENST00000454477 COL5A3P25940 1745 aaPredicted RBP16.7■□□□□ 0.26
LINC01875-201ENST00000454477 DDNO94850 711 aaPredicted RBP16.69■□□□□ 0.26
LINC01875-201ENST00000454477 ERFEQ4G0M1 354 aa16.69■□□□□ 0.26
LINC01875-201ENST00000454477 L3MBTL3Q96JM7 780 aaPredicted RBP16.69■□□□□ 0.26
LINC01875-201ENST00000454477 MRS2Q9HD23 443 aa16.69■□□□□ 0.26
LINC01875-201ENST00000454477 TBC1D2BQ9UPU7 963 aa16.69■□□□□ 0.26
LINC01875-201ENST00000454477 RRP7AQ9Y3A4 280 aaKnown RBP16.69■□□□□ 0.26
LINC01875-201ENST00000454477 CHL1O00533 1208 aa16.68■□□□□ 0.26
LINC01875-201ENST00000454477 NPHP1O15259 732 aa16.68■□□□□ 0.26
LINC01875-201ENST00000454477 SERPINB2P05120 415 aa16.68■□□□□ 0.26
LINC01875-201ENST00000454477 NCBP3Q53F19 620 aaKnown RBP16.68■□□□□ 0.26
LINC01875-201ENST00000454477 CYP4F22Q6NT55 531 aa16.68■□□□□ 0.26
LINC01875-201ENST00000454477 TJP1Q07157 1748 aa16.67■□□□□ 0.26
LINC01875-201ENST00000454477 APAF1O14727 1248 aa16.67■□□□□ 0.26
LINC01875-201ENST00000454477 CAMTA2O94983 1202 aa16.67■□□□□ 0.26
LINC01875-201ENST00000454477 DDR1Q08345 913 aa16.67■□□□□ 0.26
LINC01875-201ENST00000454477 PAXIP1Q6ZW49 1069 aaPredicted RBP16.67■□□□□ 0.26
LINC01875-201ENST00000454477 BCL2L12Q9HB09 334 aa16.67■□□□□ 0.26
LINC01875-201ENST00000454477 TRIM35Q9UPQ4 493 aa16.67■□□□□ 0.26
LINC01875-201ENST00000454477 ERVV-1B6SEH8 477 aa16.66■□□□□ 0.26
LINC01875-201ENST00000454477 HOXB7P09629 217 aa16.66■□□□□ 0.26
LINC01875-201ENST00000454477 BRPF1P55201 1214 aaPredicted RBP16.66■□□□□ 0.26
LINC01875-201ENST00000454477 KIF6Q6ZMV9 814 aa16.66■□□□□ 0.26
LINC01875-201ENST00000454477 CNTROBQ8N137 903 aa16.66■□□□□ 0.26
LINC01875-201ENST00000454477 LAS1LQ9Y4W2 734 aaKnown RBP16.66■□□□□ 0.26
LINC01875-201ENST00000454477 DLEC1Q9Y238 1755 aa16.66■□□□□ 0.26
LINC01875-201ENST00000454477 SZT2Q5T011 3432 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms