RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 SOGA3Q5TF21 947 aa31.64■■■□□ 2.66
LYSMD2-202ENST00000454181 NBPF5PQ86XG9 351 aaPredicted RBP31.64■■■□□ 2.66
LYSMD2-202ENST00000454181 JMYQ8N9B5 988 aa31.64■■■□□ 2.66
LYSMD2-202ENST00000454181 PPP2R1AP30153 589 aa31.63■■■□□ 2.65
LYSMD2-202ENST00000454181 CLEC4GQ6UXB4 293 aa31.63■■■□□ 2.65
LYSMD2-202ENST00000454181 MASTLQ96GX5 879 aa31.63■■■□□ 2.65
LYSMD2-202ENST00000454181 SRGNP10124 158 aa31.62■■■□□ 2.65
LYSMD2-202ENST00000454181 PRPF40BQ6NWY9 871 aaKnown RBP31.61■■■□□ 2.65
LYSMD2-202ENST00000454181 ANKRD31Q8N7Z5 1873 aa31.61■■■□□ 2.65
LYSMD2-202ENST00000454181 LTBP3Q9NS15 1303 aa31.6■■■□□ 2.65
LYSMD2-202ENST00000454181 PRAMEF22A3QJZ6 481 aa31.6■■■□□ 2.65
LYSMD2-202ENST00000454181 HTATSF1O43719 755 aaKnown RBP31.6■■■□□ 2.65
LYSMD2-202ENST00000454181 CCDC88AQ3V6T2 1871 aa31.59■■■□□ 2.65
LYSMD2-202ENST00000454181 TIAM2Q8IVF5 1701 aa31.59■■■□□ 2.65
LYSMD2-202ENST00000454181 NEFMP07197 916 aa31.59■■■□□ 2.65
LYSMD2-202ENST00000454181 DCTN1Q14203 1278 aa31.58■■■□□ 2.65
LYSMD2-202ENST00000454181 TPTE2Q6XPS3 522 aa31.57■■■□□ 2.64
LYSMD2-202ENST00000454181 POTECB2RU33 542 aa31.56■■■□□ 2.64
LYSMD2-202ENST00000454181 TAF7Q15545 349 aaPredicted RBP31.56■■■□□ 2.64
LYSMD2-202ENST00000454181 NIP7Q9Y221 180 aaKnown RBP eCLIP31.56■■■□□ 2.64
LYSMD2-202ENST00000454181 COL11A2P13942 1736 aaPredicted RBP31.55■■■□□ 2.64
LYSMD2-202ENST00000454181 NPR1P16066 1061 aa31.54■■■□□ 2.64
LYSMD2-202ENST00000454181 RGL2O15211 777 aa31.52■■■□□ 2.64
LYSMD2-202ENST00000454181 GTF2E1P29083 439 aaPredicted RBP31.52■■■□□ 2.64
LYSMD2-202ENST00000454181 CCDC93Q567U6 631 aa31.52■■■□□ 2.64
LYSMD2-202ENST00000454181 FER1L6Q2WGJ9 1857 aa31.51■■■□□ 2.63
LYSMD2-202ENST00000454181 FAM177BA6PVY3 158 aa31.51■■■□□ 2.63
LYSMD2-202ENST00000454181 NBPF26B4DH59 902 aa31.51■■■□□ 2.63
LYSMD2-202ENST00000454181 DDNO94850 711 aaPredicted RBP31.51■■■□□ 2.63
LYSMD2-202ENST00000454181 NBPF10Q6P3W6 841 aaKnown RBP31.51■■■□□ 2.63
LYSMD2-202ENST00000454181 NBPF15Q8N660 670 aa31.51■■■□□ 2.63
LYSMD2-202ENST00000454181 BCORQ6W2J9 1755 aa31.51■■■□□ 2.63
LYSMD2-202ENST00000454181 CHADLQ6NUI6 762 aa31.49■■■□□ 2.63
LYSMD2-202ENST00000454181 MIS18AQ9NYP9 233 aa31.49■■■□□ 2.63
LYSMD2-202ENST00000454181 SLX4Q8IY92 1834 aa31.49■■■□□ 2.63
LYSMD2-202ENST00000454181 COL13A1Q5TAT6 717 aaPredicted RBP31.48■■■□□ 2.63
LYSMD2-202ENST00000454181 PNISRQ8TF01 805 aaKnown RBP31.48■■■□□ 2.63
LYSMD2-202ENST00000454181 IQCA1LA6NCM1 817 aa31.47■■■□□ 2.63
LYSMD2-202ENST00000454181 DICER1Q9UPY3 1922 aaKnown RBP31.46■■■□□ 2.63
LYSMD2-202ENST00000454181 C7orf43Q8WVR3 580 aa31.46■■■□□ 2.63
LYSMD2-202ENST00000454181 KLRG2A4D1S0 409 aaPredicted RBP31.45■■■□□ 2.63
LYSMD2-202ENST00000454181 ALDH1B1P30837 517 aa31.45■■■□□ 2.63
LYSMD2-202ENST00000454181 RTKN2Q8IZC4 609 aa31.45■■■□□ 2.63
LYSMD2-202ENST00000454181 NGEFQ8N5V2 710 aa31.45■■■□□ 2.63
LYSMD2-202ENST00000454181 FKBP4Q02790 459 aaKnown RBP eCLIP31.44■■■□□ 2.62
LYSMD2-202ENST00000454181 HLFQ16534 295 aa31.43■■■□□ 2.62
LYSMD2-202ENST00000454181 CACNA1SQ13698 1873 aa31.43■■■□□ 2.62
LYSMD2-202ENST00000454181 NYXQ9GZU5 481 aa31.42■■■□□ 2.62
LYSMD2-202ENST00000454181 ZNF277Q9NRM2 450 aaPredicted RBP31.42■■■□□ 2.62
LYSMD2-202ENST00000454181 HSPA1AP0DMV8 641 aaKnown RBP31.41■■■□□ 2.62
LYSMD2-202ENST00000454181 HSPA1BP0DMV9 641 aaKnown RBP31.41■■■□□ 2.62
LYSMD2-202ENST00000454181 TNS4Q8IZW8 715 aa31.41■■■□□ 2.62
LYSMD2-202ENST00000454181 KIF6Q6ZMV9 814 aa31.4■■■□□ 2.62
LYSMD2-202ENST00000454181 PNNQ9H307 717 aaKnown RBP31.4■■■□□ 2.62
LYSMD2-202ENST00000454181 CREBZFQ9NS37 354 aa31.4■■■□□ 2.62
LYSMD2-202ENST00000454181 RRP7AQ9Y3A4 280 aaKnown RBP31.4■■■□□ 2.62
LYSMD2-202ENST00000454181 ARFGEF2Q9Y6D5 1785 aa31.39■■■□□ 2.62
LYSMD2-202ENST00000454181 LDHDQ86WU2 507 aa31.39■■■□□ 2.62
LYSMD2-202ENST00000454181 ERVV-1B6SEH8 477 aa31.38■■■□□ 2.61
LYSMD2-202ENST00000454181 POTEIP0CG38 1075 aa31.38■■■□□ 2.61
LYSMD2-202ENST00000454181 POTEJP0CG39 1038 aa31.38■■■□□ 2.61
LYSMD2-202ENST00000454181 L3MBTL3Q96JM7 780 aaPredicted RBP31.38■■■□□ 2.61
LYSMD2-202ENST00000454181 TAF1DQ9H5J8 278 aaPredicted RBP31.37■■■□□ 2.61
LYSMD2-202ENST00000454181 MAPK8IP3Q9UPT6 1336 aa31.36■■■□□ 2.61
LYSMD2-202ENST00000454181 OLFM4Q6UX06 510 aa31.36■■■□□ 2.61
LYSMD2-202ENST00000454181 SYNE4Q8N205 404 aa31.36■■■□□ 2.61
LYSMD2-202ENST00000454181 MKRN1Q9UHC7 482 aaKnown RBP31.36■■■□□ 2.61
LYSMD2-202ENST00000454181 MAP3K15Q6ZN16 1313 aa31.35■■■□□ 2.61
LYSMD2-202ENST00000454181 MYL6BP14649 208 aa31.35■■■□□ 2.61
LYSMD2-202ENST00000454181 EIF4A1P60842 406 aaKnown RBP31.35■■■□□ 2.61
LYSMD2-202ENST00000454181 NFE2L2Q16236 605 aa31.35■■■□□ 2.61
LYSMD2-202ENST00000454181 EAPPQ56P03 285 aaPredicted RBP31.35■■■□□ 2.61
LYSMD2-202ENST00000454181 IARSP41252 1262 aaKnown RBP31.34■■■□□ 2.61
LYSMD2-202ENST00000454181 NUTM1Q86Y26 1132 aa31.34■■■□□ 2.61
LYSMD2-202ENST00000454181 RPGRQ92834 1020 aaKnown RBP31.34■■■□□ 2.61
LYSMD2-202ENST00000454181 HACL1Q9UJ83 578 aa31.34■■■□□ 2.61
LYSMD2-202ENST00000454181 CLEC11AQ9Y240 323 aa31.34■■■□□ 2.61
LYSMD2-202ENST00000454181 CAPN15O75808 1086 aa31.33■■■□□ 2.61
LYSMD2-202ENST00000454181 JDP2Q8WYK2 163 aa31.33■■■□□ 2.61
LYSMD2-202ENST00000454181 ZNF541Q9H0D2 1346 aa31.32■■■□□ 2.6
LYSMD2-202ENST00000454181 CC2D2BQ6DHV5 1058 aa31.32■■■□□ 2.6
LYSMD2-202ENST00000454181 PLEKHF1Q96S99 279 aa31.32■■■□□ 2.6
LYSMD2-202ENST00000454181 THUMPD2Q9BTF0 503 aaKnown RBP31.32■■■□□ 2.6
LYSMD2-202ENST00000454181 GPTP24298 496 aa31.31■■■□□ 2.6
LYSMD2-202ENST00000454181 TTLL7Q6ZT98 887 aa31.31■■■□□ 2.6
LYSMD2-202ENST00000454181 CRY2Q49AN0 593 aa31.3■■■□□ 2.6
LYSMD2-202ENST00000454181 ZBTB3Q9H5J0 574 aa31.3■■■□□ 2.6
LYSMD2-202ENST00000454181 PCNTO95613 3336 aa31.29■■■□□ 2.6
LYSMD2-202ENST00000454181 EPHX2P34913 555 aa31.29■■■□□ 2.6
LYSMD2-202ENST00000454181 PNMA8AQ86V59 439 aaPredicted RBP31.29■■■□□ 2.6
LYSMD2-202ENST00000454181 LAMB4A4D0S4 1761 aa31.29■■■□□ 2.6
LYSMD2-202ENST00000454181 PSMD1Q99460 953 aa31.28■■■□□ 2.6
LYSMD2-202ENST00000454181 SCN4AP35499 1836 aa31.28■■■□□ 2.6
LYSMD2-202ENST00000454181 ABCC12Q96J65 1359 aa31.28■■■□□ 2.6
LYSMD2-202ENST00000454181 FZD9O00144 591 aa31.27■■■□□ 2.6
LYSMD2-202ENST00000454181 RBM17Q96I25 401 aaKnown RBP31.27■■■□□ 2.6
LYSMD2-202ENST00000454181 PASKQ96RG2 1323 aa31.26■■■□□ 2.6
LYSMD2-202ENST00000454181 EIF6P56537 245 aaKnown RBP31.26■■■□□ 2.59
LYSMD2-202ENST00000454181 GRIPAP1Q4V328 841 aa31.26■■■□□ 2.59
LYSMD2-202ENST00000454181 GPC2Q8N158 579 aa31.26■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms