RNA–Protein interactions for RNA: ENST00000453358.5

PTPA-224, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4

Gene PTPA, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-224ENST00000453358 DDNO94850 711 aaPredicted RBP17.4■□□□□ 0.38
PTPA-224ENST00000453358 POTEIP0CG38 1075 aa17.4■□□□□ 0.38
PTPA-224ENST00000453358 POTEJP0CG39 1038 aa17.4■□□□□ 0.38
PTPA-224ENST00000453358 ST5P78524 1137 aa17.4■□□□□ 0.38
PTPA-224ENST00000453358 NPM2Q86SE8 214 aaKnown RBP17.4■□□□□ 0.38
PTPA-224ENST00000453358 CREBZFQ9NS37 354 aa17.4■□□□□ 0.38
PTPA-224ENST00000453358 BCORQ6W2J9 1755 aa17.4■□□□□ 0.38
PTPA-224ENST00000453358 NPHP1O15259 732 aa17.39■□□□□ 0.37
PTPA-224ENST00000453358 SOGA3Q5TF21 947 aa17.39■□□□□ 0.37
PTPA-224ENST00000453358 DZIP3Q86Y13 1208 aaKnown RBP17.39■□□□□ 0.37
PTPA-224ENST00000453358 MASTLQ96GX5 879 aa17.39■□□□□ 0.37
PTPA-224ENST00000453358 ARFGEF2Q9Y6D5 1785 aa17.38■□□□□ 0.37
PTPA-224ENST00000453358 BTBD11A6QL63 1104 aa17.38■□□□□ 0.37
PTPA-224ENST00000453358 C7orf43Q8WVR3 580 aa17.38■□□□□ 0.37
PTPA-224ENST00000453358 PHACTR3Q96KR7 559 aa17.38■□□□□ 0.37
PTPA-224ENST00000453358 USP16Q9Y5T5 823 aa17.38■□□□□ 0.37
PTPA-224ENST00000453358 PIP4K2AP48426 406 aaPredicted RBP17.37■□□□□ 0.37
PTPA-224ENST00000453358 CNGB1Q14028 1251 aaPredicted RBP17.37■□□□□ 0.37
PTPA-224ENST00000453358 MKRN1Q9UHC7 482 aaKnown RBP17.37■□□□□ 0.37
PTPA-224ENST00000453358 CACNA1SQ13698 1873 aa17.37■□□□□ 0.37
PTPA-224ENST00000453358 PRAMEF22A3QJZ6 481 aa17.36■□□□□ 0.37
PTPA-224ENST00000453358 PRKAR2BP31323 418 aa17.36■□□□□ 0.37
PTPA-224ENST00000453358 CLEC4GQ6UXB4 293 aa17.36■□□□□ 0.37
PTPA-224ENST00000453358 NBPF5PQ86XG9 351 aaPredicted RBP17.36■□□□□ 0.37
PTPA-224ENST00000453358 L3MBTL3Q96JM7 780 aaPredicted RBP17.36■□□□□ 0.37
PTPA-224ENST00000453358 RSPH6AQ9H0K4 717 aa17.36■□□□□ 0.37
PTPA-224ENST00000453358 CCDC93Q567U6 631 aa17.35■□□□□ 0.37
PTPA-224ENST00000453358 LDHDQ86WU2 507 aa17.35■□□□□ 0.37
PTPA-224ENST00000453358 PASKQ96RG2 1323 aa17.35■□□□□ 0.37
PTPA-224ENST00000453358 KLRG2A4D1S0 409 aaPredicted RBP17.34■□□□□ 0.37
PTPA-224ENST00000453358 IQCA1LA6NCM1 817 aa17.34■□□□□ 0.37
PTPA-224ENST00000453358 NPR1P16066 1061 aa17.34■□□□□ 0.37
PTPA-224ENST00000453358 CNTNAP1P78357 1384 aa17.34■□□□□ 0.37
PTPA-224ENST00000453358 TAF1DQ9H5J8 278 aaPredicted RBP17.34■□□□□ 0.37
PTPA-224ENST00000453358 SNRPA1P09661 255 aaKnown RBP17.33■□□□□ 0.36
PTPA-224ENST00000453358 ZNF652Q9Y2D9 606 aa17.33■□□□□ 0.36
PTPA-224ENST00000453358 ZNF541Q9H0D2 1346 aa17.32■□□□□ 0.36
PTPA-224ENST00000453358 FKBP4Q02790 459 aaKnown RBP eCLIP17.32■□□□□ 0.36
PTPA-224ENST00000453358 SCN4AP35499 1836 aa17.32■□□□□ 0.36
PTPA-224ENST00000453358 NBPF26B4DH59 902 aa17.31■□□□□ 0.36
PTPA-224ENST00000453358 RGL2O15211 777 aa17.31■□□□□ 0.36
PTPA-224ENST00000453358 NBPF10Q6P3W6 841 aaKnown RBP17.31■□□□□ 0.36
PTPA-224ENST00000453358 OLFM4Q6UX06 510 aa17.31■□□□□ 0.36
PTPA-224ENST00000453358 MCM10Q7L590 875 aa17.31■□□□□ 0.36
PTPA-224ENST00000453358 NBPF15Q8N660 670 aa17.31■□□□□ 0.36
PTPA-224ENST00000453358 ZNF277Q9NRM2 450 aaPredicted RBP17.31■□□□□ 0.36
PTPA-224ENST00000453358 NIP7Q9Y221 180 aaKnown RBP eCLIP17.31■□□□□ 0.36
PTPA-224ENST00000453358 FOXN1O15353 648 aa17.3■□□□□ 0.36
PTPA-224ENST00000453358 ITGBL1O95965 494 aaPredicted RBP17.3■□□□□ 0.36
PTPA-224ENST00000453358 TPTE2Q6XPS3 522 aa17.3■□□□□ 0.36
PTPA-224ENST00000453358 CFAP53Q96M91 514 aa17.3■□□□□ 0.36
PTPA-224ENST00000453358 RTF1Q92541 710 aaKnown RBP17.29■□□□□ 0.36
PTPA-224ENST00000453358 TMEM88BA6NKF7 163 aa17.28■□□□□ 0.36
PTPA-224ENST00000453358 FAM177BA6PVY3 158 aa17.28■□□□□ 0.36
PTPA-224ENST00000453358 VEGFBP49765 207 aa17.28■□□□□ 0.36
PTPA-224ENST00000453358 DCTN1Q14203 1278 aa17.28■□□□□ 0.36
PTPA-224ENST00000453358 EAPPQ56P03 285 aaPredicted RBP17.28■□□□□ 0.36
PTPA-224ENST00000453358 RTKN2Q8IZC4 609 aa17.28■□□□□ 0.36
PTPA-224ENST00000453358 HACL1Q9UJ83 578 aa17.28■□□□□ 0.36
PTPA-224ENST00000453358 NUDCQ9Y266 331 aa17.28■□□□□ 0.36
PTPA-224ENST00000453358 ADAMTSL1Q8N6G6 1762 aa17.28■□□□□ 0.36
PTPA-224ENST00000453358 U2AF1L5P0DN76 240 aaPredicted RBP17.27■□□□□ 0.36
PTPA-224ENST00000453358 U2AF1Q01081 240 aaKnown RBP eCLIP17.27■□□□□ 0.36
PTPA-224ENST00000453358 HLFQ16534 295 aa17.27■□□□□ 0.36
PTPA-224ENST00000453358 PRDM10Q9NQV6 1147 aa17.27■□□□□ 0.36
PTPA-224ENST00000453358 FZD9O00144 591 aa17.26■□□□□ 0.35
PTPA-224ENST00000453358 EPHX2P34913 555 aa17.26■□□□□ 0.35
PTPA-224ENST00000453358 IARSP41252 1262 aaKnown RBP17.26■□□□□ 0.35
PTPA-224ENST00000453358 SYNE4Q8N205 404 aa17.26■□□□□ 0.35
PTPA-224ENST00000453358 SNED1Q8TER0 1413 aa17.26■□□□□ 0.35
PTPA-224ENST00000453358 RNF123Q5XPI4 1314 aa17.25■□□□□ 0.35
PTPA-224ENST00000453358 HTATSF1O43719 755 aaKnown RBP17.25■□□□□ 0.35
PTPA-224ENST00000453358 ALDH1B1P30837 517 aa17.25■□□□□ 0.35
PTPA-224ENST00000453358 CTCFP49711 727 aaPredicted RBP17.25■□□□□ 0.35
PTPA-224ENST00000453358 CLEC11AQ9Y240 323 aa17.25■□□□□ 0.35
PTPA-224ENST00000453358 CRY2Q49AN0 593 aa17.24■□□□□ 0.35
PTPA-224ENST00000453358 PNMA8AQ86V59 439 aaPredicted RBP17.24■□□□□ 0.35
PTPA-224ENST00000453358 AIDAQ96BJ3 306 aa17.24■□□□□ 0.35
PTPA-224ENST00000453358 ABCC12Q96J65 1359 aa17.24■□□□□ 0.35
PTPA-224ENST00000453358 GTF2E1P29083 439 aaPredicted RBP17.23■□□□□ 0.35
PTPA-224ENST00000453358 PPP2R1AP30153 589 aa17.23■□□□□ 0.35
PTPA-224ENST00000453358 TAF7Q15545 349 aaPredicted RBP17.23■□□□□ 0.35
PTPA-224ENST00000453358 MAP1SQ66K74 1059 aaPredicted RBP17.23■□□□□ 0.35
PTPA-224ENST00000453358 CNTROBQ8N137 903 aa17.23■□□□□ 0.35
PTPA-224ENST00000453358 GPC2Q8N158 579 aa17.23■□□□□ 0.35
PTPA-224ENST00000453358 PSMD1Q99460 953 aa17.23■□□□□ 0.35
PTPA-224ENST00000453358 WBP1LQ9NX94 342 aa17.23■□□□□ 0.35
PTPA-224ENST00000453358 MIS18AQ9NYP9 233 aa17.23■□□□□ 0.35
PTPA-224ENST00000453358 RASSF10A6NK89 507 aa17.22■□□□□ 0.35
PTPA-224ENST00000453358 COL4A5P29400 1685 aa17.22■□□□□ 0.35
PTPA-224ENST00000453358 LAMB4A4D0S4 1761 aa17.21■□□□□ 0.35
PTPA-224ENST00000453358 ERVV-1B6SEH8 477 aa17.21■□□□□ 0.35
PTPA-224ENST00000453358 NUTM1Q86Y26 1132 aa17.21■□□□□ 0.35
PTPA-224ENST00000453358 NYXQ9GZU5 481 aa17.21■□□□□ 0.35
PTPA-224ENST00000453358 CC2D2BQ6DHV5 1058 aa17.2■□□□□ 0.34
PTPA-224ENST00000453358 JDP2Q8WYK2 163 aa17.2■□□□□ 0.34
PTPA-224ENST00000453358 MAP3K15Q6ZN16 1313 aa17.2■□□□□ 0.34
PTPA-224ENST00000453358 HOXA10P31260 410 aaPredicted RBP17.19■□□□□ 0.34
PTPA-224ENST00000453358 LBX1P52954 281 aa17.19■□□□□ 0.34
PTPA-224ENST00000453358 DEFB115Q30KQ5 88 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms