RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 PRDM10Q9NQV6 1147 aa29.45■■■□□ 2.31
TNFRSF25-208ENST00000453341 IQCA1LA6NCM1 817 aa29.44■■■□□ 2.3
TNFRSF25-208ENST00000453341 C7orf43Q8WVR3 580 aa29.44■■■□□ 2.3
TNFRSF25-208ENST00000453341 MASTLQ96GX5 879 aa29.44■■■□□ 2.3
TNFRSF25-208ENST00000453341 VEGFBP49765 207 aa29.43■■■□□ 2.3
TNFRSF25-208ENST00000453341 ST5P78524 1137 aa29.43■■■□□ 2.3
TNFRSF25-208ENST00000453341 TEFQ10587 303 aa29.43■■■□□ 2.3
TNFRSF25-208ENST00000453341 CLSPNQ9HAW4 1339 aa29.43■■■□□ 2.3
TNFRSF25-208ENST00000453341 NPHP1O15259 732 aa29.42■■■□□ 2.3
TNFRSF25-208ENST00000453341 SOGA3Q5TF21 947 aa29.42■■■□□ 2.3
TNFRSF25-208ENST00000453341 ITGBL1O95965 494 aaPredicted RBP29.41■■■□□ 2.3
TNFRSF25-208ENST00000453341 COL3A1P02461 1466 aaPredicted RBP29.4■■■□□ 2.3
TNFRSF25-208ENST00000453341 ZNF541Q9H0D2 1346 aa29.4■■■□□ 2.3
TNFRSF25-208ENST00000453341 ADAMTSL1Q8N6G6 1762 aa29.39■■■□□ 2.3
TNFRSF25-208ENST00000453341 TMEM88BA6NKF7 163 aa29.39■■■□□ 2.3
TNFRSF25-208ENST00000453341 GNAT3A8MTJ3 354 aa29.39■■■□□ 2.3
TNFRSF25-208ENST00000453341 KCNQ3O43525 872 aa29.39■■■□□ 2.3
TNFRSF25-208ENST00000453341 CTCFP49711 727 aaPredicted RBP29.39■■■□□ 2.3
TNFRSF25-208ENST00000453341 DZIP3Q86Y13 1208 aaKnown RBP29.39■■■□□ 2.3
TNFRSF25-208ENST00000453341 FMNL2Q96PY5 1086 aa29.39■■■□□ 2.3
TNFRSF25-208ENST00000453341 PIP4K2AP48426 406 aaPredicted RBP29.37■■■□□ 2.29
TNFRSF25-208ENST00000453341 CCDC93Q567U6 631 aa29.37■■■□□ 2.29
TNFRSF25-208ENST00000453341 AIDAQ96BJ3 306 aa29.37■■■□□ 2.29
TNFRSF25-208ENST00000453341 WBP1LQ9NX94 342 aa29.37■■■□□ 2.29
TNFRSF25-208ENST00000453341 EAPPQ56P03 285 aaPredicted RBP29.36■■■□□ 2.29
TNFRSF25-208ENST00000453341 OLFM4Q6UX06 510 aa29.36■■■□□ 2.29
TNFRSF25-208ENST00000453341 NPM2Q86SE8 214 aaKnown RBP29.36■■■□□ 2.29
TNFRSF25-208ENST00000453341 GAS2L2Q8NHY3 880 aa29.36■■■□□ 2.29
TNFRSF25-208ENST00000453341 ZNF277Q9NRM2 450 aaPredicted RBP29.36■■■□□ 2.29
TNFRSF25-208ENST00000453341 CEMIPQ8WUJ3 1361 aa29.35■■■□□ 2.29
TNFRSF25-208ENST00000453341 LBX1P52954 281 aa29.34■■■□□ 2.29
TNFRSF25-208ENST00000453341 FKBP4Q02790 459 aaKnown RBP eCLIP29.34■■■□□ 2.29
TNFRSF25-208ENST00000453341 CC2D1BQ5T0F9 858 aaKnown RBP29.34■■■□□ 2.29
TNFRSF25-208ENST00000453341 NBPF5PQ86XG9 351 aaPredicted RBP29.34■■■□□ 2.29
TNFRSF25-208ENST00000453341 USP16Q9Y5T5 823 aa29.34■■■□□ 2.29
TNFRSF25-208ENST00000453341 PER1O15534 1290 aaPredicted RBP29.33■■■□□ 2.29
TNFRSF25-208ENST00000453341 NPR1P16066 1061 aa29.33■■■□□ 2.29
TNFRSF25-208ENST00000453341 PCGF6Q9BYE7 350 aa29.33■■■□□ 2.29
TNFRSF25-208ENST00000453341 HACL1Q9UJ83 578 aa29.33■■■□□ 2.29
TNFRSF25-208ENST00000453341 KIF7Q2M1P5 1343 aa29.32■■■□□ 2.28
TNFRSF25-208ENST00000453341 PRAMEF22A3QJZ6 481 aa29.32■■■□□ 2.28
TNFRSF25-208ENST00000453341 KLRG2A4D1S0 409 aaPredicted RBP29.32■■■□□ 2.28
TNFRSF25-208ENST00000453341 U2SURPO15042 1029 aaKnown RBP29.32■■■□□ 2.28
TNFRSF25-208ENST00000453341 EPHX2P34913 555 aa29.31■■■□□ 2.28
TNFRSF25-208ENST00000453341 CLEC11AQ9Y240 323 aa29.31■■■□□ 2.28
TNFRSF25-208ENST00000453341 CLEC4GQ6UXB4 293 aa29.3■■■□□ 2.28
TNFRSF25-208ENST00000453341 RNF123Q5XPI4 1314 aa29.29■■■□□ 2.28
TNFRSF25-208ENST00000453341 RASSF10A6NK89 507 aa29.29■■■□□ 2.28
TNFRSF25-208ENST00000453341 BTBD11A6QL63 1104 aa29.29■■■□□ 2.28
TNFRSF25-208ENST00000453341 MAP1SQ66K74 1059 aaPredicted RBP29.29■■■□□ 2.28
TNFRSF25-208ENST00000453341 HSPA8P11142 646 aaKnown RBP29.28■■■□□ 2.28
TNFRSF25-208ENST00000453341 CNTROBQ8N137 903 aa29.27■■■□□ 2.28
TNFRSF25-208ENST00000453341 PHACTR3Q96KR7 559 aa29.27■■■□□ 2.28
TNFRSF25-208ENST00000453341 FZD9O00144 591 aa29.26■■■□□ 2.27
TNFRSF25-208ENST00000453341 DEFB115Q30KQ5 88 aa29.26■■■□□ 2.27
TNFRSF25-208ENST00000453341 IARSP41252 1262 aaKnown RBP29.25■■■□□ 2.27
TNFRSF25-208ENST00000453341 PNMA8AQ86V59 439 aaPredicted RBP29.25■■■□□ 2.27
TNFRSF25-208ENST00000453341 RTKN2Q8IZC4 609 aa29.25■■■□□ 2.27
TNFRSF25-208ENST00000453341 ZNF652Q9Y2D9 606 aa29.25■■■□□ 2.27
TNFRSF25-208ENST00000453341 WDR33Q9C0J8 1336 aaKnown RBP29.24■■■□□ 2.27
TNFRSF25-208ENST00000453341 SYNE4Q8N205 404 aa29.24■■■□□ 2.27
TNFRSF25-208ENST00000453341 SNED1Q8TER0 1413 aa29.24■■■□□ 2.27
TNFRSF25-208ENST00000453341 ABHD8Q96I13 439 aa29.24■■■□□ 2.27
TNFRSF25-208ENST00000453341 NIP7Q9Y221 180 aaKnown RBP eCLIP29.24■■■□□ 2.27
TNFRSF25-208ENST00000453341 TPTE2Q6XPS3 522 aa29.23■■■□□ 2.27
TNFRSF25-208ENST00000453341 FAM177BA6PVY3 158 aa29.22■■■□□ 2.27
TNFRSF25-208ENST00000453341 NBPF26B4DH59 902 aa29.22■■■□□ 2.27
TNFRSF25-208ENST00000453341 NBPF10Q6P3W6 841 aaKnown RBP29.22■■■□□ 2.27
TNFRSF25-208ENST00000453341 NBPF15Q8N660 670 aa29.22■■■□□ 2.27
TNFRSF25-208ENST00000453341 COL4A5P29400 1685 aa29.21■■■□□ 2.27
TNFRSF25-208ENST00000453341 LTBP1Q14766 1721 aa29.21■■■□□ 2.27
TNFRSF25-208ENST00000453341 GPC2Q8N158 579 aa29.21■■■□□ 2.27
TNFRSF25-208ENST00000453341 SLC34A2O95436 690 aa29.2■■■□□ 2.26
TNFRSF25-208ENST00000453341 SNRPA1P09661 255 aaKnown RBP29.2■■■□□ 2.26
TNFRSF25-208ENST00000453341 PRKAR2BP31323 418 aa29.2■■■□□ 2.26
TNFRSF25-208ENST00000453341 ABT1Q9ULW3 272 aaKnown RBP29.2■■■□□ 2.26
TNFRSF25-208ENST00000453341 MAP2K1Q02750 393 aaPredicted RBP29.19■■■□□ 2.26
TNFRSF25-208ENST00000453341 CNGB1Q14028 1251 aaPredicted RBP29.19■■■□□ 2.26
TNFRSF25-208ENST00000453341 RSPH6AQ9H0K4 717 aa29.19■■■□□ 2.26
TNFRSF25-208ENST00000453341 RGL2O15211 777 aa29.18■■■□□ 2.26
TNFRSF25-208ENST00000453341 ALDH1B1P30837 517 aa29.18■■■□□ 2.26
TNFRSF25-208ENST00000453341 FMR1Q06787 632 aaKnown RBP eCLIP29.18■■■□□ 2.26
TNFRSF25-208ENST00000453341 HLFQ16534 295 aa29.18■■■□□ 2.26
TNFRSF25-208ENST00000453341 FAM161AQ3B820 660 aa29.18■■■□□ 2.26
TNFRSF25-208ENST00000453341 DDX21Q9NR30 783 aaKnown RBP eCLIP29.18■■■□□ 2.26
TNFRSF25-208ENST00000453341 THSD7BQ9C0I4 1608 aa29.18■■■□□ 2.26
TNFRSF25-208ENST00000453341 PSMD1Q99460 953 aa29.17■■■□□ 2.26
TNFRSF25-208ENST00000453341 NPC1L1Q9UHC9 1359 aa29.16■■■□□ 2.26
TNFRSF25-208ENST00000453341 MCM10Q7L590 875 aa29.16■■■□□ 2.26
TNFRSF25-208ENST00000453341 ABCC12Q96J65 1359 aa29.15■■■□□ 2.26
TNFRSF25-208ENST00000453341 CRY2Q49AN0 593 aa29.14■■■□□ 2.26
TNFRSF25-208ENST00000453341 JDP2Q8WYK2 163 aa29.14■■■□□ 2.26
TNFRSF25-208ENST00000453341 GJA3Q9Y6H8 435 aa29.14■■■□□ 2.26
TNFRSF25-208ENST00000453341 EPS15P42566 896 aa29.12■■■□□ 2.25
TNFRSF25-208ENST00000453341 SCNN1DP51172 638 aa29.12■■■□□ 2.25
TNFRSF25-208ENST00000453341 SLC51AQ86UW1 340 aa29.12■■■□□ 2.25
TNFRSF25-208ENST00000453341 GTF2E1P29083 439 aaPredicted RBP29.11■■■□□ 2.25
TNFRSF25-208ENST00000453341 NUTM1Q86Y26 1132 aa29.11■■■□□ 2.25
TNFRSF25-208ENST00000453341 CAPNS2Q96L46 248 aa29.11■■■□□ 2.25
TNFRSF25-208ENST00000453341 TRPM7Q96QT4 1865 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms