RNA–Protein interactions for RNA: ENST00000452660.5

LRCH3-209, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-209ENST00000452660 PIK3CDO00329 1044 aa5.56□□□□□ -1.52
LRCH3-209ENST00000452660 PSMA6P60900 246 aaKnown RBP5.56□□□□□ -1.52
LRCH3-209ENST00000452660 FLIIQ13045 1269 aa5.56□□□□□ -1.52
LRCH3-209ENST00000452660 HIF1AQ16665 826 aa5.56□□□□□ -1.52
LRCH3-209ENST00000452660 STAG2Q8N3U4 1231 aa5.56□□□□□ -1.52
LRCH3-209ENST00000452660 ZDHHC1Q8WTX9 485 aa5.56□□□□□ -1.52
LRCH3-209ENST00000452660 CHMP3Q9Y3E7 222 aa5.56□□□□□ -1.52
LRCH3-209ENST00000452660 RAD21O60216 631 aa5.55□□□□□ -1.52
LRCH3-209ENST00000452660 SLC9A9Q8IVB4 645 aa5.55□□□□□ -1.52
LRCH3-209ENST00000452660 LARGE2Q8N3Y3 721 aa5.55□□□□□ -1.52
LRCH3-209ENST00000452660 GAS2L2Q8NHY3 880 aa5.55□□□□□ -1.52
LRCH3-209ENST00000452660 TRIM11Q96F44 468 aa5.55□□□□□ -1.52
LRCH3-209ENST00000452660 NEUROD4Q9HD90 331 aa5.55□□□□□ -1.52
LRCH3-209ENST00000452660 TXLNAP40222 546 aa5.54□□□□□ -1.52
LRCH3-209ENST00000452660 CHRNA4P43681 627 aa5.54□□□□□ -1.52
LRCH3-209ENST00000452660 GATA4P43694 442 aa5.54□□□□□ -1.52
LRCH3-209ENST00000452660 PCBP4P57723 403 aaKnown RBP5.54□□□□□ -1.52
LRCH3-209ENST00000452660 PSME1Q06323 249 aa5.54□□□□□ -1.52
LRCH3-209ENST00000452660 PRRT3Q5FWE3 981 aa5.54□□□□□ -1.52
LRCH3-209ENST00000452660 SYT9Q86SS6 491 aa5.54□□□□□ -1.52
LRCH3-209ENST00000452660 SIX5Q8N196 739 aa5.54□□□□□ -1.52
LRCH3-209ENST00000452660 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.54□□□□□ -1.52
LRCH3-209ENST00000452660 NACC1Q96RE7 527 aa5.54□□□□□ -1.52
LRCH3-209ENST00000452660 PLVAPQ9BX97 442 aa5.54□□□□□ -1.52
LRCH3-209ENST00000452660 STRN4Q9NRL3 753 aa5.54□□□□□ -1.52
LRCH3-209ENST00000452660 PALM3A6NDB9 673 aaPredicted RBP5.53□□□□□ -1.52
LRCH3-209ENST00000452660 ZBTB7BO15156 539 aaPredicted RBP5.53□□□□□ -1.52
LRCH3-209ENST00000452660 FURINP09958 794 aa5.53□□□□□ -1.52
LRCH3-209ENST00000452660 ATP9BO43861 1147 aa5.52□□□□□ -1.53
LRCH3-209ENST00000452660 CCDC102BQ68D86 513 aa5.52□□□□□ -1.53
LRCH3-209ENST00000452660 RHPN1Q8TCX5 695 aa5.52□□□□□ -1.53
LRCH3-209ENST00000452660 C11orf16Q9NQ32 467 aa5.52□□□□□ -1.53
LRCH3-209ENST00000452660 USP17L3A6NCW0 530 aa5.51□□□□□ -1.53
LRCH3-209ENST00000452660 USP17L4A6NCW7 530 aa5.51□□□□□ -1.53
LRCH3-209ENST00000452660 APBA3O96018 575 aa5.51□□□□□ -1.53
LRCH3-209ENST00000452660 COL9A3Q14050 684 aaPredicted RBP5.51□□□□□ -1.53
LRCH3-209ENST00000452660 IER5Q5VY09 327 aa5.51□□□□□ -1.53
LRCH3-209ENST00000452660 USP17L2Q6R6M4 530 aa5.51□□□□□ -1.53
LRCH3-209ENST00000452660 LRRC69Q6ZNQ3 347 aa5.51□□□□□ -1.53
LRCH3-209ENST00000452660 USP17L1Q7RTZ2 530 aa5.51□□□□□ -1.53
LRCH3-209ENST00000452660 TNS4Q8IZW8 715 aa5.51□□□□□ -1.53
LRCH3-209ENST00000452660 Q8N3U1 123 aa5.51□□□□□ -1.53
LRCH3-209ENST00000452660 ZNF232Q9UNY5 417 aa5.51□□□□□ -1.53
LRCH3-209ENST00000452660 PARP3Q9Y6F1 533 aa5.51□□□□□ -1.53
LRCH3-209ENST00000452660 SPEM2Q0P670 501 aa5.5□□□□□ -1.53
LRCH3-209ENST00000452660 MICALL1Q8N3F8 863 aa5.5□□□□□ -1.53
LRCH3-209ENST00000452660 TPCN2Q8NHX9 752 aa5.5□□□□□ -1.53
LRCH3-209ENST00000452660 BRD7Q9NPI1 651 aa5.5□□□□□ -1.53
LRCH3-209ENST00000452660 KCNH4Q9UQ05 1017 aa5.5□□□□□ -1.53
LRCH3-209ENST00000452660 M0R082 166 aa5.49□□□□□ -1.53
LRCH3-209ENST00000452660 ADH7P40394 386 aa5.49□□□□□ -1.53
LRCH3-209ENST00000452660 CLDN10P78369 228 aa5.49□□□□□ -1.53
LRCH3-209ENST00000452660 TYRO3Q06418 890 aa5.49□□□□□ -1.53
LRCH3-209ENST00000452660 SFSWAPQ12872 951 aaKnown RBP5.49□□□□□ -1.53
LRCH3-209ENST00000452660 C20orf204Q6ZNR8 217 aa5.49□□□□□ -1.53
LRCH3-209ENST00000452660 OGFOD1Q8N543 542 aa5.49□□□□□ -1.53
LRCH3-209ENST00000452660 ZNF417Q8TAU3 575 aa5.49□□□□□ -1.53
LRCH3-209ENST00000452660 ZNF587Q96SQ5 575 aaPredicted RBP5.49□□□□□ -1.53
LRCH3-209ENST00000452660 PHACTR1Q9C0D0 580 aa5.49□□□□□ -1.53
LRCH3-209ENST00000452660 STARD13Q9Y3M8 1113 aa5.49□□□□□ -1.53
LRCH3-209ENST00000452660 RBM19Q9Y4C8 960 aaKnown RBP5.49□□□□□ -1.53
LRCH3-209ENST00000452660 C9orf172C9J069 976 aa5.48□□□□□ -1.53
LRCH3-209ENST00000452660 DKK1O94907 266 aa5.48□□□□□ -1.53
LRCH3-209ENST00000452660 NID1P14543 1247 aa5.48□□□□□ -1.53
LRCH3-209ENST00000452660 UBTFP17480 764 aaKnown RBP5.48□□□□□ -1.53
LRCH3-209ENST00000452660 TRIM28Q13263 835 aaKnown RBP5.48□□□□□ -1.53
LRCH3-209ENST00000452660 NKAPLQ5M9Q1 402 aa5.48□□□□□ -1.53
LRCH3-209ENST00000452660 ADAMTS19Q8TE59 1207 aa5.48□□□□□ -1.53
LRCH3-209ENST00000452660 SUSD3Q96L08 255 aa5.48□□□□□ -1.53
LRCH3-209ENST00000452660 CEP63Q96MT8 703 aa5.48□□□□□ -1.53
LRCH3-209ENST00000452660 UCN2Q96RP3 112 aa5.48□□□□□ -1.53
LRCH3-209ENST00000452660 SLC30A3Q99726 388 aa5.48□□□□□ -1.53
LRCH3-209ENST00000452660 TSPAN10Q9H1Z9 355 aaPredicted RBP5.48□□□□□ -1.53
LRCH3-209ENST00000452660 KIAA1024Q9UPX6 916 aa5.48□□□□□ -1.53
LRCH3-209ENST00000452660 ALBP02768 609 aa5.47□□□□□ -1.53
LRCH3-209ENST00000452660 PCSK7Q16549 785 aa5.47□□□□□ -1.53
LRCH3-209ENST00000452660 RSPO4Q2I0M5 234 aaPredicted RBP5.47□□□□□ -1.53
LRCH3-209ENST00000452660 HDGFL1Q5TGJ6 251 aa5.47□□□□□ -1.53
LRCH3-209ENST00000452660 DEPDC4Q8N2C3 294 aa5.47□□□□□ -1.53
LRCH3-209ENST00000452660 POM121Q96HA1 1249 aa5.47□□□□□ -1.53
LRCH3-209ENST00000452660 C2orf49Q9BVC5 232 aaPredicted RBP5.47□□□□□ -1.53
LRCH3-209ENST00000452660 MKRN1Q9UHC7 482 aaKnown RBP5.47□□□□□ -1.53
LRCH3-209ENST00000452660 LILRB5O75023 590 aa5.46□□□□□ -1.54
LRCH3-209ENST00000452660 ITGB7P26010 798 aa5.46□□□□□ -1.54
LRCH3-209ENST00000452660 NRG1Q02297 640 aaPredicted RBP5.46□□□□□ -1.54
LRCH3-209ENST00000452660 DOC2BQ14184 412 aa5.46□□□□□ -1.54
LRCH3-209ENST00000452660 SH3PXD2AQ5TCZ1 1133 aa5.46□□□□□ -1.54
LRCH3-209ENST00000452660 ILDR2Q71H61 639 aa5.46□□□□□ -1.54
LRCH3-209ENST00000452660 ALDH16A1Q8IZ83 802 aa5.46□□□□□ -1.54
LRCH3-209ENST00000452660 SEMA6BQ9H3T3 888 aa5.46□□□□□ -1.54
LRCH3-209ENST00000452660 ATAD2Q6PL18 1390 aa5.45□□□□□ -1.54
LRCH3-209ENST00000452660 SFI1A8K8P3 1242 aa5.45□□□□□ -1.54
LRCH3-209ENST00000452660 C21orf2O43822 256 aa5.45□□□□□ -1.54
LRCH3-209ENST00000452660 PPP1R12BO60237 982 aaPredicted RBP5.45□□□□□ -1.54
LRCH3-209ENST00000452660 H2AFB1P0C5Y9 115 aa5.45□□□□□ -1.54
LRCH3-209ENST00000452660 H2AFB2P0C5Z0 115 aa5.45□□□□□ -1.54
LRCH3-209ENST00000452660 ELNP15502 786 aa5.45□□□□□ -1.54
LRCH3-209ENST00000452660 SEC13P55735 322 aa5.45□□□□□ -1.54
LRCH3-209ENST00000452660 RTN1Q16799 776 aa5.45□□□□□ -1.54
LRCH3-209ENST00000452660 BTLAQ7Z6A9 289 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms