RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 RRAGCQ9HB90 399 aa14.56□□□□□ -0.08
USP1-204ENST00000452143 TBC1D2BQ9UPU7 963 aa14.56□□□□□ -0.08
USP1-204ENST00000452143 GLTPD2A6NH11 291 aa14.55□□□□□ -0.08
USP1-204ENST00000452143 NFKBIEO00221 500 aa14.55□□□□□ -0.08
USP1-204ENST00000452143 CAMTA2O94983 1202 aa14.55□□□□□ -0.08
USP1-204ENST00000452143 CNBD1Q8NA66 436 aa14.55□□□□□ -0.08
USP1-204ENST00000452143 SMC1BQ8NDV3 1235 aa14.55□□□□□ -0.08
USP1-204ENST00000452143 RTF1Q92541 710 aaKnown RBP14.55□□□□□ -0.08
USP1-204ENST00000452143 SETDB2Q96T68 719 aa14.55□□□□□ -0.08
USP1-204ENST00000452143 DLG5Q8TDM6 1919 aa14.54□□□□□ -0.08
USP1-204ENST00000452143 RGL2O15211 777 aa14.54□□□□□ -0.08
USP1-204ENST00000452143 U2AF1L5P0DN76 240 aaPredicted RBP14.54□□□□□ -0.08
USP1-204ENST00000452143 PPP2R1AP30153 589 aa14.54□□□□□ -0.08
USP1-204ENST00000452143 PRELPP51888 382 aa14.54□□□□□ -0.08
USP1-204ENST00000452143 U2AF1Q01081 240 aaKnown RBP eCLIP14.54□□□□□ -0.08
USP1-204ENST00000452143 DZIP3Q86Y13 1208 aaKnown RBP14.54□□□□□ -0.08
USP1-204ENST00000452143 LTBP3Q9NS15 1303 aa14.54□□□□□ -0.08
USP1-204ENST00000452143 SLX4Q8IY92 1834 aa14.53□□□□□ -0.08
USP1-204ENST00000452143 KDM3BQ7LBC6 1761 aa14.53□□□□□ -0.08
USP1-204ENST00000452143 HTATSF1O43719 755 aaKnown RBP14.53□□□□□ -0.08
USP1-204ENST00000452143 A1BGP04217 495 aa14.53□□□□□ -0.08
USP1-204ENST00000452143 VEGFAP15692 232 aaPredicted RBP14.53□□□□□ -0.08
USP1-204ENST00000452143 ST5P78524 1137 aa14.53□□□□□ -0.08
USP1-204ENST00000452143 CLEC4GQ6UXB4 293 aa14.53□□□□□ -0.08
USP1-204ENST00000452143 ZNF622Q969S3 477 aaKnown RBP eCLIP14.53□□□□□ -0.084e-8■■□□□ 14.3
USP1-204ENST00000452143 ZNF652Q9Y2D9 606 aa14.53□□□□□ -0.08
USP1-204ENST00000452143 NPHP1O15259 732 aa14.52□□□□□ -0.09
USP1-204ENST00000452143 KCNQ3O43525 872 aa14.52□□□□□ -0.09
USP1-204ENST00000452143 SNRPA1P09661 255 aaKnown RBP14.52□□□□□ -0.09
USP1-204ENST00000452143 STYK1Q6J9G0 422 aa14.52□□□□□ -0.09
USP1-204ENST00000452143 CNKSR1Q969H4 720 aa14.52□□□□□ -0.09
USP1-204ENST00000452143 KLRG1Q96E93 195 aa14.52□□□□□ -0.09
USP1-204ENST00000452143 SOGA3Q5TF21 947 aa14.51□□□□□ -0.09
USP1-204ENST00000452143 MCM10Q7L590 875 aa14.51□□□□□ -0.09
USP1-204ENST00000452143 TAOK3Q9H2K8 898 aa14.51□□□□□ -0.09
USP1-204ENST00000452143 USP16Q9Y5T5 823 aa14.51□□□□□ -0.09
USP1-204ENST00000452143 C21orf2O43822 256 aa14.5□□□□□ -0.09
USP1-204ENST00000452143 SRGNP10124 158 aa14.5□□□□□ -0.09
USP1-204ENST00000452143 DPY19L2Q6NUT2 758 aa14.5□□□□□ -0.09
USP1-204ENST00000452143 JMYQ8N9B5 988 aa14.5□□□□□ -0.09
USP1-204ENST00000452143 ERFEQ4G0M1 354 aa14.49□□□□□ -0.09
USP1-204ENST00000452143 PRPF40BQ6NWY9 871 aaKnown RBP14.49□□□□□ -0.09
USP1-204ENST00000452143 CCDC24Q8N4L8 307 aa14.49□□□□□ -0.09
USP1-204ENST00000452143 MASTLQ96GX5 879 aa14.49□□□□□ -0.09
USP1-204ENST00000452143 SCN4AP35499 1836 aa14.48□□□□□ -0.09
USP1-204ENST00000452143 PRAMEF22A3QJZ6 481 aa14.48□□□□□ -0.09
USP1-204ENST00000452143 HTRA3P83110 453 aa14.48□□□□□ -0.09
USP1-204ENST00000452143 NBPF5PQ86XG9 351 aaPredicted RBP14.48□□□□□ -0.09
USP1-204ENST00000452143 NUP98P52948 1817 aa14.48□□□□□ -0.09
USP1-204ENST00000452143 NEFMP07197 916 aa14.47□□□□□ -0.09
USP1-204ENST00000452143 PIP4K2AP48426 406 aaPredicted RBP14.47□□□□□ -0.09
USP1-204ENST00000452143 TAF7Q15545 349 aaPredicted RBP14.47□□□□□ -0.09
USP1-204ENST00000452143 KLRG2A4D1S0 409 aaPredicted RBP14.46□□□□□ -0.09
USP1-204ENST00000452143 NBPF26B4DH59 902 aa14.46□□□□□ -0.09
USP1-204ENST00000452143 NPR1P16066 1061 aa14.46□□□□□ -0.09
USP1-204ENST00000452143 DCTN1Q14203 1278 aa14.46□□□□□ -0.09
USP1-204ENST00000452143 NBPF10Q6P3W6 841 aaKnown RBP14.46□□□□□ -0.09
USP1-204ENST00000452143 NBPF15Q8N660 670 aa14.46□□□□□ -0.09
USP1-204ENST00000452143 POTECB2RU33 542 aa14.45□□□□□ -0.1
USP1-204ENST00000452143 CCDC93Q567U6 631 aa14.45□□□□□ -0.1
USP1-204ENST00000452143 TPTE2Q6XPS3 522 aa14.45□□□□□ -0.1
USP1-204ENST00000452143 PNISRQ8TF01 805 aaKnown RBP14.45□□□□□ -0.1
USP1-204ENST00000452143 NIP7Q9Y221 180 aaKnown RBP eCLIP14.45□□□□□ -0.1
USP1-204ENST00000452143 RIC1Q4ADV7 1423 aa14.44□□□□□ -0.1
USP1-204ENST00000452143 C7orf43Q8WVR3 580 aa14.44□□□□□ -0.1
USP1-204ENST00000452143 IBTKQ9P2D0 1353 aaPredicted RBP14.43□□□□□ -0.1
USP1-204ENST00000452143 IQCA1LA6NCM1 817 aa14.42□□□□□ -0.1
USP1-204ENST00000452143 L3MBTL3Q96JM7 780 aaPredicted RBP14.42□□□□□ -0.1
USP1-204ENST00000452143 ERVV-1B6SEH8 477 aa14.41□□□□□ -0.1
USP1-204ENST00000452143 FKBP4Q02790 459 aaKnown RBP eCLIP14.41□□□□□ -0.1
USP1-204ENST00000452143 CHADLQ6NUI6 762 aa14.41□□□□□ -0.1
USP1-204ENST00000452143 PLEKHF1Q96S99 279 aa14.41□□□□□ -0.1
USP1-204ENST00000452143 NYXQ9GZU5 481 aa14.41□□□□□ -0.1
USP1-204ENST00000452143 PNNQ9H307 717 aaKnown RBP14.41□□□□□ -0.1
USP1-204ENST00000452143 SNED1Q8TER0 1413 aa14.41□□□□□ -0.1
USP1-204ENST00000452143 ADAMTSL1Q8N6G6 1762 aa14.4□□□□□ -0.1
USP1-204ENST00000452143 DDNO94850 711 aaPredicted RBP14.4□□□□□ -0.1
USP1-204ENST00000452143 ALDH1B1P30837 517 aa14.4□□□□□ -0.1
USP1-204ENST00000452143 NFE2L2Q16236 605 aa14.4□□□□□ -0.1
USP1-204ENST00000452143 HLFQ16534 295 aa14.4□□□□□ -0.1
USP1-204ENST00000452143 CRY2Q49AN0 593 aa14.4□□□□□ -0.1
USP1-204ENST00000452143 RTKN2Q8IZC4 609 aa14.4□□□□□ -0.1
USP1-204ENST00000452143 SP7Q8TDD2 431 aaPredicted RBP14.4□□□□□ -0.1
USP1-204ENST00000452143 ERBB4Q15303 1308 aa14.4□□□□□ -0.1
USP1-204ENST00000452143 MAP3K15Q6ZN16 1313 aa14.4□□□□□ -0.1
USP1-204ENST00000452143 MAPK8IP3Q9UPT6 1336 aa14.4□□□□□ -0.1
USP1-204ENST00000452143 ABCC12Q96J65 1359 aa14.39□□□□□ -0.11
USP1-204ENST00000452143 GTF2E1P29083 439 aaPredicted RBP14.39□□□□□ -0.11
USP1-204ENST00000452143 EIF4A1P60842 406 aaKnown RBP14.39□□□□□ -0.11
USP1-204ENST00000452143 KIF6Q6ZMV9 814 aa14.39□□□□□ -0.11
USP1-204ENST00000452143 CREBZFQ9NS37 354 aa14.39□□□□□ -0.11
USP1-204ENST00000452143 MIS18AQ9NYP9 233 aa14.39□□□□□ -0.11
USP1-204ENST00000452143 ANKRD36CQ5JPF3 1778 aa14.39□□□□□ -0.11
USP1-204ENST00000452143 LDHDQ86WU2 507 aa14.38□□□□□ -0.11
USP1-204ENST00000452143 FAM177BA6PVY3 158 aa14.37□□□□□ -0.11
USP1-204ENST00000452143 CC2D2BQ6DHV5 1058 aa14.37□□□□□ -0.11
USP1-204ENST00000452143 PSMD1Q99460 953 aa14.37□□□□□ -0.11
USP1-204ENST00000452143 POTEIP0CG38 1075 aa14.36□□□□□ -0.11
USP1-204ENST00000452143 POTEJP0CG39 1038 aa14.36□□□□□ -0.11
USP1-204ENST00000452143 IARSP41252 1262 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms