RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 ZPR1O75312 459 aa30.86■■■□□ 2.53
CPSF4-207ENST00000451876 ZBTB7AO95365 584 aa30.86■■■□□ 2.53
CPSF4-207ENST00000451876 BCL2L12Q9HB09 334 aa30.86■■■□□ 2.53
CPSF4-207ENST00000451876 MSL1Q68DK7 614 aa30.85■■■□□ 2.53
CPSF4-207ENST00000451876 SLC16A10Q8TF71 515 aa30.84■■■□□ 2.53
CPSF4-207ENST00000451876 ZBTB3Q9H5J0 574 aa30.84■■■□□ 2.53
CPSF4-207ENST00000451876 KIF6Q6ZMV9 814 aa30.84■■■□□ 2.53
CPSF4-207ENST00000451876 MAP3K15Q6ZN16 1313 aa30.83■■■□□ 2.53
CPSF4-207ENST00000451876 ANKRD36CQ5JPF3 1778 aa30.83■■■□□ 2.53
CPSF4-207ENST00000451876 RARSP54136 660 aaKnown RBP30.83■■■□□ 2.53
CPSF4-207ENST00000451876 ALDH1L2Q3SY69 923 aa30.83■■■□□ 2.53
CPSF4-207ENST00000451876 FKBP8Q14318 412 aa30.82■■■□□ 2.52
CPSF4-207ENST00000451876 HLFQ16534 295 aa30.82■■■□□ 2.52
CPSF4-207ENST00000451876 MRPL50Q8N5N7 158 aaKnown RBP30.82■■■□□ 2.52
CPSF4-207ENST00000451876 SRCAPQ6ZRS2 3230 aa30.82■■■□□ 2.52
CPSF4-207ENST00000451876 FLIIQ13045 1269 aa30.81■■■□□ 2.52
CPSF4-207ENST00000451876 SMC4Q9NTJ3 1288 aa30.81■■■□□ 2.52
CPSF4-207ENST00000451876 MTFR1LQ9H019 292 aa30.8■■■□□ 2.52
CPSF4-207ENST00000451876 ATF5Q9Y2D1 282 aaPredicted RBP30.8■■■□□ 2.52
CPSF4-207ENST00000451876 ERVV-1B6SEH8 477 aa30.78■■■□□ 2.52
CPSF4-207ENST00000451876 ANKRD13DQ6ZTN6 518 aa30.78■■■□□ 2.52
CPSF4-207ENST00000451876 PLBD2Q8NHP8 589 aa30.77■■■□□ 2.52
CPSF4-207ENST00000451876 ADCY9O60503 1353 aa30.76■■■□□ 2.51
CPSF4-207ENST00000451876 BCAR3O75815 825 aa30.76■■■□□ 2.51
CPSF4-207ENST00000451876 TBC1D9BQ66K14 1250 aa30.76■■■□□ 2.51
CPSF4-207ENST00000451876 NLGN1Q8N2Q7 840 aa30.76■■■□□ 2.51
CPSF4-207ENST00000451876 FKBP5Q13451 457 aaPredicted RBP30.75■■■□□ 2.51
CPSF4-207ENST00000451876 CLEC4GQ6UXB4 293 aa30.75■■■□□ 2.51
CPSF4-207ENST00000451876 GIGYF2Q6Y7W6 1299 aaKnown RBP30.75■■■□□ 2.51
CPSF4-207ENST00000451876 ZNF652Q9Y2D9 606 aa30.75■■■□□ 2.51
CPSF4-207ENST00000451876 AFDNP55196 1824 aaKnown RBP30.74■■■□□ 2.51
CPSF4-207ENST00000451876 ATP10DQ9P241 1426 aa30.73■■■□□ 2.51
CPSF4-207ENST00000451876 PI4KAP2A4QPH2 592 aa30.73■■■□□ 2.51
CPSF4-207ENST00000451876 RGL2O15211 777 aa30.73■■■□□ 2.51
CPSF4-207ENST00000451876 NFIXQ14938 502 aa30.73■■■□□ 2.51
CPSF4-207ENST00000451876 BICDL1Q6ZP65 573 aa30.73■■■□□ 2.51
CPSF4-207ENST00000451876 PI4KAP1Q8N8J0 262 aa30.73■■■□□ 2.51
CPSF4-207ENST00000451876 DDX58O95786 925 aaKnown RBP30.73■■■□□ 2.51
CPSF4-207ENST00000451876 RIC3Q7Z5B4 369 aa30.73■■■□□ 2.51
CPSF4-207ENST00000451876 SGIP1Q9BQI5 828 aa30.73■■■□□ 2.51
CPSF4-207ENST00000451876 MMP10P09238 476 aa30.72■■■□□ 2.51
CPSF4-207ENST00000451876 PTGER2P43116 358 aa30.72■■■□□ 2.51
CPSF4-207ENST00000451876 BRPF1P55201 1214 aaPredicted RBP30.72■■■□□ 2.51
CPSF4-207ENST00000451876 KSR2Q6VAB6 950 aa30.72■■■□□ 2.51
CPSF4-207ENST00000451876 MAP3K2Q9Y2U5 619 aa30.72■■■□□ 2.51
CPSF4-207ENST00000451876 TM4SF1P30408 202 aa30.71■■■□□ 2.51
CPSF4-207ENST00000451876 DDR1Q08345 913 aa30.71■■■□□ 2.51
CPSF4-207ENST00000451876 SPON1Q9HCB6 807 aa30.7■■■□□ 2.51
CPSF4-207ENST00000451876 NRXN2Q9P2S2 1712 aa30.7■■■□□ 2.5
CPSF4-207ENST00000451876 UBN2Q6ZU65 1347 aa30.69■■■□□ 2.5
CPSF4-207ENST00000451876 F6X3S4 739 aa30.69■■■□□ 2.5
CPSF4-207ENST00000451876 GPTP24298 496 aa30.69■■■□□ 2.5
CPSF4-207ENST00000451876 RCAN3Q9UKA8 241 aa30.69■■■□□ 2.5
CPSF4-207ENST00000451876 NOB1Q9ULX3 412 aaKnown RBP30.69■■■□□ 2.5
CPSF4-207ENST00000451876 NIP7Q9Y221 180 aaKnown RBP eCLIP30.69■■■□□ 2.5
CPSF4-207ENST00000451876 PTPRCP08575 1304 aa30.68■■■□□ 2.5
CPSF4-207ENST00000451876 POLRMTO00411 1230 aaKnown RBP30.67■■■□□ 2.5
CPSF4-207ENST00000451876 TCIRG1Q13488 830 aa30.67■■■□□ 2.5
CPSF4-207ENST00000451876 ZNF34Q8IZ26 560 aa30.67■■■□□ 2.5
CPSF4-207ENST00000451876 LRP5O75197 1615 aa30.67■■■□□ 2.5
CPSF4-207ENST00000451876 KIF16BQ96L93 1317 aa30.67■■■□□ 2.5
CPSF4-207ENST00000451876 CARMIL3Q8ND23 1372 aa30.66■■■□□ 2.5
CPSF4-207ENST00000451876 SETDB2Q96T68 719 aa30.65■■■□□ 2.5
CPSF4-207ENST00000451876 MYD88Q99836 296 aa30.65■■■□□ 2.5
CPSF4-207ENST00000451876 METTL22Q9BUU2 404 aaPredicted RBP30.65■■■□□ 2.5
CPSF4-207ENST00000451876 N4BP2Q86UW6 1770 aaPredicted RBP30.65■■■□□ 2.5
CPSF4-207ENST00000451876 ATP5J2-PTCD1G3V325 749 aa30.65■■■□□ 2.5
CPSF4-207ENST00000451876 POLD1P28340 1107 aa30.65■■■□□ 2.5
CPSF4-207ENST00000451876 HSP90AB3PQ58FF7 597 aa30.65■■■□□ 2.5
CPSF4-207ENST00000451876 DNAAF4Q8WXU2 420 aa30.65■■■□□ 2.5
CPSF4-207ENST00000451876 FRAT1Q92837 279 aaPredicted RBP30.63■■■□□ 2.49
CPSF4-207ENST00000451876 ISCA1Q9BUE6 129 aa30.63■■■□□ 2.49
CPSF4-207ENST00000451876 PARP3Q9Y6F1 533 aa30.62■■■□□ 2.49
CPSF4-207ENST00000451876 FAM177BA6PVY3 158 aa30.61■■■□□ 2.49
CPSF4-207ENST00000451876 SERPINB2P05120 415 aa30.61■■■□□ 2.49
CPSF4-207ENST00000451876 IGKV5-2P06315 115 aa30.61■■■□□ 2.49
CPSF4-207ENST00000451876 NLRP10Q86W26 655 aa30.6■■■□□ 2.49
CPSF4-207ENST00000451876 TNNQ9UQP3 1299 aa30.6■■■□□ 2.49
CPSF4-207ENST00000451876 CWF19L2Q2TBE0 894 aaKnown RBP30.59■■■□□ 2.49
CPSF4-207ENST00000451876 SUSD4Q5VX71 490 aa30.59■■■□□ 2.49
CPSF4-207ENST00000451876 PXDNLA1KZ92 1463 aa30.59■■■□□ 2.49
CPSF4-207ENST00000451876 KIF13BQ9NQT8 1826 aa30.59■■■□□ 2.49
CPSF4-207ENST00000451876 SLC4A10Q6U841 1118 aa30.58■■■□□ 2.49
CPSF4-207ENST00000451876 ANKRD31Q8N7Z5 1873 aa30.58■■■□□ 2.49
CPSF4-207ENST00000451876 TRIM27P14373 513 aa30.58■■■□□ 2.49
CPSF4-207ENST00000451876 NEXNQ0ZGT2 675 aa30.58■■■□□ 2.49
CPSF4-207ENST00000451876 ARHGAP45Q92619 1136 aa30.58■■■□□ 2.49
CPSF4-207ENST00000451876 PARP10Q53GL7 1025 aa30.57■■■□□ 2.48
CPSF4-207ENST00000451876 BEND3Q5T5X7 828 aa30.57■■■□□ 2.48
CPSF4-207ENST00000451876 NBPF5PQ86XG9 351 aaPredicted RBP30.57■■■□□ 2.48
CPSF4-207ENST00000451876 NTSR2O95665 410 aa30.56■■■□□ 2.48
CPSF4-207ENST00000451876 TRIM28Q13263 835 aaKnown RBP30.56■■■□□ 2.48
CPSF4-207ENST00000451876 ATF7IPQ6VMQ6 1270 aa30.56■■■□□ 2.48
CPSF4-207ENST00000451876 API5Q9BZZ5 524 aaKnown RBP30.56■■■□□ 2.48
CPSF4-207ENST00000451876 IBTKQ9P2D0 1353 aaPredicted RBP30.56■■■□□ 2.48
CPSF4-207ENST00000451876 NEURL1BA8MQ27 555 aa30.55■■■□□ 2.48
CPSF4-207ENST00000451876 PRR5LQ6MZQ0 368 aa30.55■■■□□ 2.48
CPSF4-207ENST00000451876 CCDC24Q8N4L8 307 aa30.55■■■□□ 2.48
CPSF4-207ENST00000451876 IPO8O15397 1037 aaKnown RBP30.55■■■□□ 2.48
CPSF4-207ENST00000451876 ZKSCAN2Q63HK3 967 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms