RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 DCDC2BA2VCK2 349 aa8.67□□□□□ -1.02
GTF3C3-207ENST00000451088 EFSO43281 561 aa8.67□□□□□ -1.02
GTF3C3-207ENST00000451088 BMP4P12644 408 aa8.67□□□□□ -1.02
GTF3C3-207ENST00000451088 C2orf49Q9BVC5 232 aaPredicted RBP8.67□□□□□ -1.02
GTF3C3-207ENST00000451088 GDF2Q9UK05 429 aaPredicted RBP8.67□□□□□ -1.02
GTF3C3-207ENST00000451088 RNF225M0QZC1 329 aaPredicted RBP8.66□□□□□ -1.02
GTF3C3-207ENST00000451088 PPP1R12BO60237 982 aaPredicted RBP8.66□□□□□ -1.02
GTF3C3-207ENST00000451088 C1orf229Q6ZS94 237 aaPredicted RBP8.66□□□□□ -1.02
GTF3C3-207ENST00000451088 GOLGA6L1Q8N7Z2 621 aa8.66□□□□□ -1.02
GTF3C3-207ENST00000451088 SCG3Q8WXD2 468 aaKnown RBP8.66□□□□□ -1.02
GTF3C3-207ENST00000451088 HCN4Q9Y3Q4 1203 aa8.66□□□□□ -1.02
GTF3C3-207ENST00000451088 GJA3Q9Y6H8 435 aa8.66□□□□□ -1.02
GTF3C3-207ENST00000451088 KHNYNO15037 678 aaKnown RBP8.65□□□□□ -1.02
GTF3C3-207ENST00000451088 ARAFP10398 606 aa8.65□□□□□ -1.02
GTF3C3-207ENST00000451088 MARSP56192 900 aaKnown RBP8.65□□□□□ -1.02
GTF3C3-207ENST00000451088 LAMC2Q13753 1193 aa8.65□□□□□ -1.02
GTF3C3-207ENST00000451088 LRRC69Q6ZNQ3 347 aa8.65□□□□□ -1.02
GTF3C3-207ENST00000451088 RHPN1Q8TCX5 695 aa8.65□□□□□ -1.02
GTF3C3-207ENST00000451088 PHACTR1Q9C0D0 580 aa8.65□□□□□ -1.02
GTF3C3-207ENST00000451088 CD33P20138 364 aa8.64□□□□□ -1.03
GTF3C3-207ENST00000451088 IGFBP4P22692 258 aa8.64□□□□□ -1.03
GTF3C3-207ENST00000451088 SRPK2P78362 688 aaKnown RBP8.64□□□□□ -1.03
GTF3C3-207ENST00000451088 SCARF2Q96GP6 870 aaPredicted RBP8.64□□□□□ -1.03
GTF3C3-207ENST00000451088 SHISA8B8ZZ34 492 aa8.63□□□□□ -1.03
GTF3C3-207ENST00000451088 SLCO4C1Q6ZQN7 724 aa8.63□□□□□ -1.03
GTF3C3-207ENST00000451088 ALDH16A1Q8IZ83 802 aa8.63□□□□□ -1.03
GTF3C3-207ENST00000451088 HINFPQ9BQA5 517 aa8.63□□□□□ -1.03
GTF3C3-207ENST00000451088 AVENQ9NQS1 362 aaPredicted RBP8.63□□□□□ -1.03
GTF3C3-207ENST00000451088 STRN4Q9NRL3 753 aa8.63□□□□□ -1.03
GTF3C3-207ENST00000451088 GGA1Q9UJY5 639 aa8.63□□□□□ -1.03
GTF3C3-207ENST00000451088 RFX1P22670 979 aa8.62□□□□□ -1.03
GTF3C3-207ENST00000451088 WEE1P30291 646 aa8.62□□□□□ -1.03
GTF3C3-207ENST00000451088 RASSF7Q02833 373 aa8.62□□□□□ -1.03
GTF3C3-207ENST00000451088 GALNT6Q8NCL4 622 aa8.62□□□□□ -1.03
GTF3C3-207ENST00000451088 NEDD1Q8NHV4 660 aa8.62□□□□□ -1.03
GTF3C3-207ENST00000451088 EDARADDQ8WWZ3 215 aa8.62□□□□□ -1.03
GTF3C3-207ENST00000451088 NEUROD4Q9HD90 331 aa8.62□□□□□ -1.03
GTF3C3-207ENST00000451088 MARK1Q9P0L2 795 aa8.62□□□□□ -1.03
GTF3C3-207ENST00000451088 ANKIB1Q9P2G1 1089 aa8.62□□□□□ -1.03
GTF3C3-207ENST00000451088 ELOAQ14241 798 aaKnown RBP8.61□□□□□ -1.03
GTF3C3-207ENST00000451088 CDCA8Q53HL2 280 aa8.61□□□□□ -1.03
GTF3C3-207ENST00000451088 FAM200AQ8TCP9 573 aa8.61□□□□□ -1.03
GTF3C3-207ENST00000451088 CHMP7Q8WUX9 453 aaPredicted RBP8.61□□□□□ -1.03
GTF3C3-207ENST00000451088 SUSD3Q96L08 255 aa8.61□□□□□ -1.03
GTF3C3-207ENST00000451088 KLF15Q9UIH9 416 aa8.61□□□□□ -1.03
GTF3C3-207ENST00000451088 DNMT3AQ9Y6K1 912 aaPredicted RBP8.61□□□□□ -1.03
GTF3C3-207ENST00000451088 LGR5O75473 907 aa8.6□□□□□ -1.03
GTF3C3-207ENST00000451088 EPXP11678 715 aa8.6□□□□□ -1.03
GTF3C3-207ENST00000451088 ZNF468Q5VIY5 522 aaPredicted RBP8.6□□□□□ -1.03
GTF3C3-207ENST00000451088 NOVA2Q9UNW9 492 aaKnown RBP8.6□□□□□ -1.03
GTF3C3-207ENST00000451088 CNTNAP5Q8WYK1 1306 aa8.59□□□□□ -1.03
GTF3C3-207ENST00000451088 ADH6P28332 368 aa8.59□□□□□ -1.03
GTF3C3-207ENST00000451088 KANK3Q6NY19 840 aa8.59□□□□□ -1.03
GTF3C3-207ENST00000451088 BEND7Q8N7W2 519 aaPredicted RBP8.59□□□□□ -1.03
GTF3C3-207ENST00000451088 ZNF280CQ8ND82 737 aa8.59□□□□□ -1.03
GTF3C3-207ENST00000451088 HSH2DQ96JZ2 352 aa8.59□□□□□ -1.03
GTF3C3-207ENST00000451088 NEURL1BA8MQ27 555 aa8.58□□□□□ -1.04
GTF3C3-207ENST00000451088 IRS1P35568 1242 aa8.58□□□□□ -1.04
GTF3C3-207ENST00000451088 KCNQ4P56696 695 aa8.58□□□□□ -1.04
GTF3C3-207ENST00000451088 SFSWAPQ12872 951 aaKnown RBP8.58□□□□□ -1.04
GTF3C3-207ENST00000451088 HIF1AQ16665 826 aa8.58□□□□□ -1.04
GTF3C3-207ENST00000451088 RTN1Q16799 776 aa8.58□□□□□ -1.04
GTF3C3-207ENST00000451088 FCHSD1Q86WN1 690 aa8.58□□□□□ -1.04
GTF3C3-207ENST00000451088 ZMIZ1Q9ULJ6 1067 aa8.58□□□□□ -1.04
GTF3C3-207ENST00000451088 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.57□□□□□ -1.04
GTF3C3-207ENST00000451088 PHF20L1A8MW92 1017 aa8.57□□□□□ -1.04
GTF3C3-207ENST00000451088 FOXO3O43524 673 aa8.57□□□□□ -1.04
GTF3C3-207ENST00000451088 GDF11O95390 407 aa8.57□□□□□ -1.04
GTF3C3-207ENST00000451088 HOXB4P17483 251 aaPredicted RBP8.57□□□□□ -1.04
GTF3C3-207ENST00000451088 SNRPNP63162 240 aaKnown RBP8.57□□□□□ -1.04
GTF3C3-207ENST00000451088 TYRO3Q06418 890 aa8.57□□□□□ -1.04
GTF3C3-207ENST00000451088 SWI5Q1ZZU3 235 aa8.57□□□□□ -1.04
GTF3C3-207ENST00000451088 TMEM151AQ8N4L1 468 aa8.57□□□□□ -1.04
GTF3C3-207ENST00000451088 NGLY1Q96IV0 654 aa8.57□□□□□ -1.04
GTF3C3-207ENST00000451088 ACIN1Q9UKV3 1341 aaKnown RBP8.56□□□□□ -1.04
GTF3C3-207ENST00000451088 ATG7O95352 703 aa8.56□□□□□ -1.04
GTF3C3-207ENST00000451088 GRIN2CQ14957 1233 aa8.56□□□□□ -1.04
GTF3C3-207ENST00000451088 IER5Q5VY09 327 aa8.56□□□□□ -1.04
GTF3C3-207ENST00000451088 PODNQ7Z5L7 613 aa8.56□□□□□ -1.04
GTF3C3-207ENST00000451088 BTBD6Q96KE9 485 aa8.56□□□□□ -1.04
GTF3C3-207ENST00000451088 CEP63Q96MT8 703 aa8.56□□□□□ -1.04
GTF3C3-207ENST00000451088 MDFIQ99750 246 aa8.56□□□□□ -1.04
GTF3C3-207ENST00000451088 BRD7Q9NPI1 651 aa8.56□□□□□ -1.04
GTF3C3-207ENST00000451088 SERPINA10Q9UK55 444 aa8.56□□□□□ -1.04
GTF3C3-207ENST00000451088 PRR12Q9ULL5 1215 aa8.56□□□□□ -1.04
GTF3C3-207ENST00000451088 PCBP4P57723 403 aaKnown RBP8.55□□□□□ -1.04
GTF3C3-207ENST00000451088 FAM69CQ0P6D2 419 aa8.55□□□□□ -1.04
GTF3C3-207ENST00000451088 BTLAQ7Z6A9 289 aa8.55□□□□□ -1.04
GTF3C3-207ENST00000451088 CCDC97Q96F63 343 aaPredicted RBP8.55□□□□□ -1.04
GTF3C3-207ENST00000451088 BCS1LQ9Y276 419 aa8.55□□□□□ -1.04
GTF3C3-207ENST00000451088 ARID3CA6NKF2 412 aa8.54□□□□□ -1.04
GTF3C3-207ENST00000451088 STK32AQ8WU08 396 aa8.54□□□□□ -1.04
GTF3C3-207ENST00000451088 SLC30A3Q99726 388 aa8.54□□□□□ -1.04
GTF3C3-207ENST00000451088 QTRT2Q9H974 415 aaKnown RBP8.54□□□□□ -1.04
GTF3C3-207ENST00000451088 CECR2Q9BXF3 1484 aa8.53□□□□□ -1.04
GTF3C3-207ENST00000451088 TGFBR3LH3BV60 316 aa8.53□□□□□ -1.04
GTF3C3-207ENST00000451088 SIN3BO75182 1162 aa8.53□□□□□ -1.04
GTF3C3-207ENST00000451088 LINC00114Q6XXX2 140 aa8.53□□□□□ -1.04
GTF3C3-207ENST00000451088 SYT9Q86SS6 491 aa8.53□□□□□ -1.04
GTF3C3-207ENST00000451088 PBXIP1Q96AQ6 731 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms