RNA–Protein interactions for RNA: ENST00000450931.5

PMS1-217, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-217ENST00000450931 TEFQ10587 303 aa8.91□□□□□ -0.98
PMS1-217ENST00000450931 CLEC4GQ6UXB4 293 aa8.91□□□□□ -0.98
PMS1-217ENST00000450931 BICDL1Q6ZP65 573 aa8.91□□□□□ -0.98
PMS1-217ENST00000450931 NPM2Q86SE8 214 aaKnown RBP8.91□□□□□ -0.98
PMS1-217ENST00000450931 FMNL2Q96PY5 1086 aa8.91□□□□□ -0.98
PMS1-217ENST00000450931 MKRN1Q9UHC7 482 aaKnown RBP8.91□□□□□ -0.98
PMS1-217ENST00000450931 TMEM88BA6NKF7 163 aa8.9□□□□□ -0.98
PMS1-217ENST00000450931 FOXN1O15353 648 aa8.9□□□□□ -0.98
PMS1-217ENST00000450931 ZNF496Q96IT1 587 aaPredicted RBP8.9□□□□□ -0.98
PMS1-217ENST00000450931 TAF1DQ9H5J8 278 aaPredicted RBP8.9□□□□□ -0.98
PMS1-217ENST00000450931 LAMB4A4D0S4 1761 aa8.9□□□□□ -0.98
PMS1-217ENST00000450931 KLRG2A4D1S0 409 aaPredicted RBP8.9□□□□□ -0.98
PMS1-217ENST00000450931 GNAT3A8MTJ3 354 aa8.9□□□□□ -0.98
PMS1-217ENST00000450931 DDNO94850 711 aaPredicted RBP8.9□□□□□ -0.98
PMS1-217ENST00000450931 HMOX1P09601 288 aa8.9□□□□□ -0.98
PMS1-217ENST00000450931 FKBP4Q02790 459 aaKnown RBP eCLIP8.9□□□□□ -0.98
PMS1-217ENST00000450931 ZNF652Q9Y2D9 606 aa8.9□□□□□ -0.98
PMS1-217ENST00000450931 NPR1P16066 1061 aa8.9□□□□□ -0.99
PMS1-217ENST00000450931 PNMA8AQ86V59 439 aaPredicted RBP8.9□□□□□ -0.99
PMS1-217ENST00000450931 C7orf43Q8WVR3 580 aa8.9□□□□□ -0.99
PMS1-217ENST00000450931 RIC1Q4ADV7 1423 aa8.89□□□□□ -0.99
PMS1-217ENST00000450931 RASSF10A6NK89 507 aa8.89□□□□□ -0.99
PMS1-217ENST00000450931 HACL1Q9UJ83 578 aa8.89□□□□□ -0.99
PMS1-217ENST00000450931 ITGBL1O95965 494 aaPredicted RBP8.89□□□□□ -0.99
PMS1-217ENST00000450931 RTKN2Q8IZC4 609 aa8.89□□□□□ -0.99
PMS1-217ENST00000450931 WBP1LQ9NX94 342 aa8.89□□□□□ -0.99
PMS1-217ENST00000450931 NPHP1O15259 732 aa8.88□□□□□ -0.99
PMS1-217ENST00000450931 POTEIP0CG38 1075 aa8.88□□□□□ -0.99
PMS1-217ENST00000450931 POTEJP0CG39 1038 aa8.88□□□□□ -0.99
PMS1-217ENST00000450931 DZIP3Q86Y13 1208 aaKnown RBP8.88□□□□□ -0.99
PMS1-217ENST00000450931 TBC1D2BQ9UPU7 963 aa8.88□□□□□ -0.99
PMS1-217ENST00000450931 SNED1Q8TER0 1413 aa8.88□□□□□ -0.99
PMS1-217ENST00000450931 VEGFBP49765 207 aa8.88□□□□□ -0.99
PMS1-217ENST00000450931 GRIPAP1Q4V328 841 aa8.88□□□□□ -0.99
PMS1-217ENST00000450931 IL17REQ8NFR9 667 aa8.88□□□□□ -0.99
PMS1-217ENST00000450931 ZNF219Q9P2Y4 722 aaPredicted RBP8.88□□□□□ -0.99
PMS1-217ENST00000450931 SLC34A2O95436 690 aa8.87□□□□□ -0.99
PMS1-217ENST00000450931 MAP2K1Q02750 393 aaPredicted RBP8.87□□□□□ -0.99
PMS1-217ENST00000450931 EPHX2P34913 555 aa8.87□□□□□ -0.99
PMS1-217ENST00000450931 CC2D2BQ6DHV5 1058 aa8.87□□□□□ -0.99
PMS1-217ENST00000450931 NBPF5PQ86XG9 351 aaPredicted RBP8.87□□□□□ -0.99
PMS1-217ENST00000450931 IBTKQ9P2D0 1353 aaPredicted RBP8.87□□□□□ -0.99
PMS1-217ENST00000450931 FZD9O00144 591 aa8.86□□□□□ -0.99
PMS1-217ENST00000450931 ALDH1B1P30837 517 aa8.86□□□□□ -0.99
PMS1-217ENST00000450931 GPC2Q8N158 579 aa8.86□□□□□ -0.99
PMS1-217ENST00000450931 PSMD1Q99460 953 aa8.86□□□□□ -0.99
PMS1-217ENST00000450931 ZNF541Q9H0D2 1346 aa8.86□□□□□ -0.99
PMS1-217ENST00000450931 PER1O15534 1290 aaPredicted RBP8.86□□□□□ -0.99
PMS1-217ENST00000450931 TPTE2Q6XPS3 522 aa8.86□□□□□ -0.99
PMS1-217ENST00000450931 BTBD11A6QL63 1104 aa8.86□□□□□ -0.99
PMS1-217ENST00000450931 A1BGP04217 495 aa8.86□□□□□ -0.99
PMS1-217ENST00000450931 HSPA8P11142 646 aaKnown RBP8.86□□□□□ -0.99
PMS1-217ENST00000450931 IARSP41252 1262 aaKnown RBP8.86□□□□□ -0.99
PMS1-217ENST00000450931 DEFB115Q30KQ5 88 aa8.86□□□□□ -0.99
PMS1-217ENST00000450931 ZNF330Q9Y3S2 320 aaPredicted RBP8.86□□□□□ -0.99
PMS1-217ENST00000450931 KIF7Q2M1P5 1343 aa8.85□□□□□ -0.99
PMS1-217ENST00000450931 TRPM7Q96QT4 1865 aa8.85□□□□□ -0.99
PMS1-217ENST00000450931 SNRPA1P09661 255 aaKnown RBP8.85□□□□□ -0.99
PMS1-217ENST00000450931 CCDC24Q8N4L8 307 aa8.85□□□□□ -0.99
PMS1-217ENST00000450931 WDR33Q9C0J8 1336 aaKnown RBP8.84□□□□□ -0.99
PMS1-217ENST00000450931 ECE1P42892 770 aa8.84□□□□□ -0.99
PMS1-217ENST00000450931 EAPPQ56P03 285 aaPredicted RBP8.84□□□□□ -0.99
PMS1-217ENST00000450931 CNTROBQ8N137 903 aa8.84□□□□□ -0.99
PMS1-217ENST00000450931 LTBP1Q14766 1721 aa8.84□□□□□ -0.99
PMS1-217ENST00000450931 HTATSF1O43719 755 aaKnown RBP8.84□□□□□ -0.99
PMS1-217ENST00000450931 LBX1P52954 281 aa8.84□□□□□ -0.99
PMS1-217ENST00000450931 CRY2Q49AN0 593 aa8.84□□□□□ -0.99
PMS1-217ENST00000450931 ABHD8Q96I13 439 aa8.84□□□□□ -0.99
PMS1-217ENST00000450931 NYXQ9GZU5 481 aa8.84□□□□□ -0.99
PMS1-217ENST00000450931 CLEC11AQ9Y240 323 aa8.84□□□□□ -0.99
PMS1-217ENST00000450931 KDM3BQ7LBC6 1761 aa8.83□□□□□ -1
PMS1-217ENST00000450931 JDP2Q8WYK2 163 aa8.83□□□□□ -1
PMS1-217ENST00000450931 ZNF277Q9NRM2 450 aaPredicted RBP8.83□□□□□ -1
PMS1-217ENST00000450931 U2SURPO15042 1029 aaKnown RBP8.83□□□□□ -1
PMS1-217ENST00000450931 EIF6P56537 245 aaKnown RBP8.83□□□□□ -1
PMS1-217ENST00000450931 SYNE4Q8N205 404 aa8.83□□□□□ -1
PMS1-217ENST00000450931 VPS33BQ9H267 617 aa8.83□□□□□ -1
PMS1-217ENST00000450931 NIP7Q9Y221 180 aaKnown RBP eCLIP8.83□□□□□ -1
PMS1-217ENST00000450931 USP16Q9Y5T5 823 aa8.83□□□□□ -1
PMS1-217ENST00000450931 RNF123Q5XPI4 1314 aa8.82□□□□□ -1
PMS1-217ENST00000450931 LMOD1P29536 600 aaPredicted RBP8.82□□□□□ -1
PMS1-217ENST00000450931 RGS19P49795 217 aa8.82□□□□□ -1
PMS1-217ENST00000450931 USP50Q70EL3 339 aaPredicted RBP8.82□□□□□ -1
PMS1-217ENST00000450931 CFAP53Q96M91 514 aa8.82□□□□□ -1
PMS1-217ENST00000450931 RSPH6AQ9H0K4 717 aa8.82□□□□□ -1
PMS1-217ENST00000450931 DDX21Q9NR30 783 aaKnown RBP eCLIP8.82□□□□□ -1
PMS1-217ENST00000450931 ERVV-1B6SEH8 477 aa8.82□□□□□ -1
PMS1-217ENST00000450931 HOXA10P31260 410 aaPredicted RBP8.82□□□□□ -1
PMS1-217ENST00000450931 PCDH10Q9P2E7 1040 aa8.82□□□□□ -1
PMS1-217ENST00000450931 NUP98P52948 1817 aa8.82□□□□□ -1
PMS1-217ENST00000450931 CA12O43570 354 aa8.81□□□□□ -1
PMS1-217ENST00000450931 RTF1Q92541 710 aaKnown RBP8.81□□□□□ -1
PMS1-217ENST00000450931 HHIPL1Q96JK4 782 aa8.81□□□□□ -1
PMS1-217ENST00000450931 ABT1Q9ULW3 272 aaKnown RBP8.81□□□□□ -1
PMS1-217ENST00000450931 CDHR2Q9BYE9 1310 aa8.81□□□□□ -1
PMS1-217ENST00000450931 CC2D1BQ5T0F9 858 aaKnown RBP8.81□□□□□ -1
PMS1-217ENST00000450931 MAP1SQ66K74 1059 aaPredicted RBP8.81□□□□□ -1
PMS1-217ENST00000450931 COL4A5P29400 1685 aa8.81□□□□□ -1
PMS1-217ENST00000450931 KCNQ3O43525 872 aa8.81□□□□□ -1
PMS1-217ENST00000450931 PRKAR2BP31323 418 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms