RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 BCORQ6W2J9 1755 aa13.66□□□□□ -0.22
LINC01004-202ENST00000450686 PRR5LQ6MZQ0 368 aa13.66□□□□□ -0.22
LINC01004-202ENST00000450686 TTLL6Q8N841 843 aa13.66□□□□□ -0.22
LINC01004-202ENST00000450686 GAS2L2Q8NHY3 880 aa13.66□□□□□ -0.22
LINC01004-202ENST00000450686 ZNF622Q969S3 477 aaKnown RBP eCLIP13.66□□□□□ -0.22
LINC01004-202ENST00000450686 RSPH6AQ9H0K4 717 aa13.66□□□□□ -0.22
LINC01004-202ENST00000450686 SLX4Q8IY92 1834 aa13.65□□□□□ -0.22
LINC01004-202ENST00000450686 H0YIN7 160 aa13.65□□□□□ -0.22
LINC01004-202ENST00000450686 C21orf2O43822 256 aa13.65□□□□□ -0.22
LINC01004-202ENST00000450686 DCTN1Q14203 1278 aa13.65□□□□□ -0.22
LINC01004-202ENST00000450686 MCM10Q7L590 875 aa13.65□□□□□ -0.22
LINC01004-202ENST00000450686 CEMIPQ8WUJ3 1361 aa13.64□□□□□ -0.23
LINC01004-202ENST00000450686 NPC1L1Q9UHC9 1359 aa13.64□□□□□ -0.23
LINC01004-202ENST00000450686 CAMTA2O94983 1202 aa13.64□□□□□ -0.23
LINC01004-202ENST00000450686 LMNB1P20700 586 aa13.64□□□□□ -0.23
LINC01004-202ENST00000450686 FER1L6Q2WGJ9 1857 aa13.63□□□□□ -0.23
LINC01004-202ENST00000450686 BTBD11A6QL63 1104 aa13.63□□□□□ -0.23
LINC01004-202ENST00000450686 FMNL2Q96PY5 1086 aa13.63□□□□□ -0.23
LINC01004-202ENST00000450686 USP16Q9Y5T5 823 aa13.63□□□□□ -0.23
LINC01004-202ENST00000450686 A0A087WZG4 1122 aa13.62□□□□□ -0.23
LINC01004-202ENST00000450686 IL6STP40189 918 aaPredicted RBP13.62□□□□□ -0.23
LINC01004-202ENST00000450686 DICER1Q9UPY3 1922 aaKnown RBP13.62□□□□□ -0.23
LINC01004-202ENST00000450686 GLTPD2A6NH11 291 aa13.61□□□□□ -0.23
LINC01004-202ENST00000450686 FAM177BA6PVY3 158 aa13.61□□□□□ -0.23
LINC01004-202ENST00000450686 U2AF1L5P0DN76 240 aaPredicted RBP13.61□□□□□ -0.23
LINC01004-202ENST00000450686 PPP2R1AP30153 589 aa13.61□□□□□ -0.23
LINC01004-202ENST00000450686 U2AF1Q01081 240 aaKnown RBP eCLIP13.61□□□□□ -0.23
LINC01004-202ENST00000450686 FSTL1Q12841 308 aa13.61□□□□□ -0.23
LINC01004-202ENST00000450686 DZIP3Q86Y13 1208 aaKnown RBP13.61□□□□□ -0.23
LINC01004-202ENST00000450686 KLRG1Q96E93 195 aa13.61□□□□□ -0.23
LINC01004-202ENST00000450686 MIS18AQ9NYP9 233 aa13.61□□□□□ -0.23
LINC01004-202ENST00000450686 POTECB2RU33 542 aa13.6□□□□□ -0.23
LINC01004-202ENST00000450686 NPHP1O15259 732 aa13.6□□□□□ -0.23
LINC01004-202ENST00000450686 FXR2P51116 673 aaKnown RBP eCLIP13.6□□□□□ -0.23
LINC01004-202ENST00000450686 OLFM4Q6UX06 510 aa13.6□□□□□ -0.23
LINC01004-202ENST00000450686 CNBD1Q8NA66 436 aa13.6□□□□□ -0.23
LINC01004-202ENST00000450686 SETDB2Q96T68 719 aa13.6□□□□□ -0.23
LINC01004-202ENST00000450686 BRIP1Q9BX63 1249 aa13.6□□□□□ -0.23
LINC01004-202ENST00000450686 DLG5Q8TDM6 1919 aa13.59□□□□□ -0.23
LINC01004-202ENST00000450686 ARFGEF2Q9Y6D5 1785 aa13.59□□□□□ -0.23
LINC01004-202ENST00000450686 NBPF26B4DH59 902 aa13.59□□□□□ -0.23
LINC01004-202ENST00000450686 POTEIP0CG38 1075 aa13.59□□□□□ -0.23
LINC01004-202ENST00000450686 POTEJP0CG39 1038 aa13.59□□□□□ -0.23
LINC01004-202ENST00000450686 NBPF10Q6P3W6 841 aaKnown RBP13.59□□□□□ -0.23
LINC01004-202ENST00000450686 NBPF15Q8N660 670 aa13.59□□□□□ -0.23
LINC01004-202ENST00000450686 SMC1BQ8NDV3 1235 aa13.59□□□□□ -0.23
LINC01004-202ENST00000450686 CFAP53Q96M91 514 aa13.59□□□□□ -0.23
LINC01004-202ENST00000450686 TEX13AQ9BXU3 409 aaPredicted RBP13.59□□□□□ -0.23
LINC01004-202ENST00000450686 VEGFAP15692 232 aaPredicted RBP13.58□□□□□ -0.24
LINC01004-202ENST00000450686 PDE6BP35913 854 aa13.58□□□□□ -0.24
LINC01004-202ENST00000450686 ERFEQ4G0M1 354 aa13.58□□□□□ -0.24
LINC01004-202ENST00000450686 COL13A1Q5TAT6 717 aaPredicted RBP13.58□□□□□ -0.24
LINC01004-202ENST00000450686 PRPF40BQ6NWY9 871 aaKnown RBP13.58□□□□□ -0.24
LINC01004-202ENST00000450686 PRR29P0C7W0 189 aa13.57□□□□□ -0.24
LINC01004-202ENST00000450686 ST5P78524 1137 aa13.57□□□□□ -0.24
LINC01004-202ENST00000450686 NPM2Q86SE8 214 aaKnown RBP13.57□□□□□ -0.24
LINC01004-202ENST00000450686 SLC51AQ86UW1 340 aa13.57□□□□□ -0.24
LINC01004-202ENST00000450686 PIP4P2Q8N4L2 257 aa13.57□□□□□ -0.24
LINC01004-202ENST00000450686 ZC3H4Q9UPT8 1303 aaKnown RBP13.57□□□□□ -0.24
LINC01004-202ENST00000450686 DDNO94850 711 aaPredicted RBP13.56□□□□□ -0.24
LINC01004-202ENST00000450686 SRGNP10124 158 aa13.56□□□□□ -0.24
LINC01004-202ENST00000450686 NBPF5PQ86XG9 351 aaPredicted RBP13.56□□□□□ -0.24
LINC01004-202ENST00000450686 NGEFQ8N5V2 710 aa13.56□□□□□ -0.24
LINC01004-202ENST00000450686 SP7Q8TDD2 431 aaPredicted RBP13.56□□□□□ -0.24
LINC01004-202ENST00000450686 RTF1Q92541 710 aaKnown RBP13.56□□□□□ -0.24
LINC01004-202ENST00000450686 THUMPD2Q9BTF0 503 aaKnown RBP13.56□□□□□ -0.24
LINC01004-202ENST00000450686 TAOK3Q9H2K8 898 aa13.56□□□□□ -0.24
LINC01004-202ENST00000450686 LAMB4A4D0S4 1761 aa13.55□□□□□ -0.24
LINC01004-202ENST00000450686 SNRPA1P09661 255 aaKnown RBP13.55□□□□□ -0.24
LINC01004-202ENST00000450686 HLFQ16534 295 aa13.55□□□□□ -0.24
LINC01004-202ENST00000450686 JMYQ8N9B5 988 aa13.55□□□□□ -0.24
LINC01004-202ENST00000450686 NUDCQ9Y266 331 aa13.55□□□□□ -0.24
LINC01004-202ENST00000450686 KDM3BQ7LBC6 1761 aa13.54□□□□□ -0.24
LINC01004-202ENST00000450686 STYK1Q6J9G0 422 aa13.54□□□□□ -0.24
LINC01004-202ENST00000450686 MASTLQ96GX5 879 aa13.54□□□□□ -0.24
LINC01004-202ENST00000450686 NIP7Q9Y221 180 aaKnown RBP eCLIP13.54□□□□□ -0.24
LINC01004-202ENST00000450686 CNKSR1Q969H4 720 aa13.53□□□□□ -0.24
LINC01004-202ENST00000450686 ZNF277Q9NRM2 450 aaPredicted RBP13.53□□□□□ -0.24
LINC01004-202ENST00000450686 ZNF541Q9H0D2 1346 aa13.53□□□□□ -0.24
LINC01004-202ENST00000450686 ABCC12Q96J65 1359 aa13.53□□□□□ -0.24
LINC01004-202ENST00000450686 NUP98P52948 1817 aa13.53□□□□□ -0.24
LINC01004-202ENST00000450686 NUTM1Q86Y26 1132 aa13.52□□□□□ -0.25
LINC01004-202ENST00000450686 C7orf43Q8WVR3 580 aa13.52□□□□□ -0.25
LINC01004-202ENST00000450686 LTBP3Q9NS15 1303 aa13.51□□□□□ -0.25
LINC01004-202ENST00000450686 HSPA1AP0DMV8 641 aaKnown RBP13.51□□□□□ -0.25
LINC01004-202ENST00000450686 HSPA1BP0DMV9 641 aaKnown RBP13.51□□□□□ -0.25
LINC01004-202ENST00000450686 TAF7Q15545 349 aaPredicted RBP13.51□□□□□ -0.25
LINC01004-202ENST00000450686 DPY19L2Q6NUT2 758 aa13.51□□□□□ -0.25
LINC01004-202ENST00000450686 TTLL7Q6ZT98 887 aa13.51□□□□□ -0.25
LINC01004-202ENST00000450686 MYL6BP14649 208 aa13.5□□□□□ -0.25
LINC01004-202ENST00000450686 GPTP24298 496 aa13.5□□□□□ -0.25
LINC01004-202ENST00000450686 CCDC93Q567U6 631 aa13.5□□□□□ -0.25
LINC01004-202ENST00000450686 MKRN1Q9UHC7 482 aaKnown RBP13.5□□□□□ -0.25
LINC01004-202ENST00000450686 FBXO3Q9UK99 471 aa13.5□□□□□ -0.25
LINC01004-202ENST00000450686 PDZRN3Q9UPQ7 1066 aa13.5□□□□□ -0.25
LINC01004-202ENST00000450686 ZNF652Q9Y2D9 606 aa13.5□□□□□ -0.25
LINC01004-202ENST00000450686 RRP7AQ9Y3A4 280 aaKnown RBP13.5□□□□□ -0.25
LINC01004-202ENST00000450686 COL4A5P29400 1685 aa13.5□□□□□ -0.25
LINC01004-202ENST00000450686 NPR1P16066 1061 aa13.49□□□□□ -0.25
LINC01004-202ENST00000450686 CHADLQ6NUI6 762 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms