RNA–Protein interactions for RNA: ENST00000449600.1

NPHP1-208, Transcript of nephrocystin 1, humanhuman

TSL 3

Gene NPHP1, Length 486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-208ENST00000449600 BLOC1S3Q6QNY0 202 aa11.03□□□□□ -0.64
NPHP1-208ENST00000449600 TMC1Q8TDI8 760 aa11.03□□□□□ -0.64
NPHP1-208ENST00000449600 ZNF775Q96BV0 537 aaPredicted RBP11.03□□□□□ -0.64
NPHP1-208ENST00000449600 LRRC4BQ9NT99 713 aa11.03□□□□□ -0.64
NPHP1-208ENST00000449600 PCDHB3Q9Y5E6 796 aa11.03□□□□□ -0.64
NPHP1-208ENST00000449600 MINK1Q8N4C8 1332 aaPredicted RBP11.03□□□□□ -0.64
NPHP1-208ENST00000449600 NHSQ6T4R5 1651 aa11.02□□□□□ -0.64
NPHP1-208ENST00000449600 QRICH2Q9H0J4 1663 aa11.02□□□□□ -0.64
NPHP1-208ENST00000449600 CCER2I3L3R5 266 aa11.02□□□□□ -0.65
NPHP1-208ENST00000449600 HTRA3P83110 453 aa11.02□□□□□ -0.65
NPHP1-208ENST00000449600 FSTL1Q12841 308 aa11.02□□□□□ -0.65
NPHP1-208ENST00000449600 PANK3Q9H999 370 aa11.02□□□□□ -0.65
NPHP1-208ENST00000449600 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.02□□□□□ -0.65
NPHP1-208ENST00000449600 KNSTRNQ9Y448 316 aa11.02□□□□□ -0.65
NPHP1-208ENST00000449600 TNS2Q63HR2 1409 aa11.01□□□□□ -0.65
NPHP1-208ENST00000449600 AKAP12Q02952 1782 aa11.01□□□□□ -0.65
NPHP1-208ENST00000449600 HSPA1AP0DMV8 641 aaKnown RBP11.01□□□□□ -0.65
NPHP1-208ENST00000449600 HSPA1BP0DMV9 641 aaKnown RBP11.01□□□□□ -0.65
NPHP1-208ENST00000449600 AMER1Q5JTC6 1135 aaPredicted RBP11.01□□□□□ -0.65
NPHP1-208ENST00000449600 PRR14Q9BWN1 585 aa11.01□□□□□ -0.65
NPHP1-208ENST00000449600 TLL1O43897 1013 aa11□□□□□ -0.65
NPHP1-208ENST00000449600 GCP02774 474 aa11□□□□□ -0.65
NPHP1-208ENST00000449600 SLC19A1P41440 591 aa11□□□□□ -0.65
NPHP1-208ENST00000449600 SLC27A3Q5K4L6 730 aa11□□□□□ -0.65
NPHP1-208ENST00000449600 KTN1Q86UP2 1357 aaKnown RBP11□□□□□ -0.65
NPHP1-208ENST00000449600 CICQ96RK0 1608 aaPredicted RBP10.99□□□□□ -0.65
NPHP1-208ENST00000449600 WASLO00401 505 aaPredicted RBP10.99□□□□□ -0.65
NPHP1-208ENST00000449600 NUTM2GQ5VZR2 741 aa10.99□□□□□ -0.65
NPHP1-208ENST00000449600 WNK3Q9BYP7 1800 aa10.99□□□□□ -0.65
NPHP1-208ENST00000449600 POLR3AO14802 1390 aaPredicted RBP10.99□□□□□ -0.65
NPHP1-208ENST00000449600 SLC4A3P48751 1232 aa10.98□□□□□ -0.65
NPHP1-208ENST00000449600 CNGB1Q14028 1251 aaPredicted RBP10.98□□□□□ -0.65
NPHP1-208ENST00000449600 RALBP1Q15311 655 aa10.98□□□□□ -0.65
NPHP1-208ENST00000449600 SPRYD7Q5W111 196 aa10.98□□□□□ -0.65
NPHP1-208ENST00000449600 TOM1L2Q6ZVM7 507 aa10.98□□□□□ -0.65
NPHP1-208ENST00000449600 CDK19Q9BWU1 502 aa10.98□□□□□ -0.65
NPHP1-208ENST00000449600 RTN4Q9NQC3 1192 aaKnown RBP10.98□□□□□ -0.65
NPHP1-208ENST00000449600 TERF2IPQ9NYB0 399 aa10.98□□□□□ -0.65
NPHP1-208ENST00000449600 WDR17Q8IZU2 1322 aa10.98□□□□□ -0.65
NPHP1-208ENST00000449600 EXOC5O00471 708 aa10.97□□□□□ -0.65
NPHP1-208ENST00000449600 PRR20EP86478 221 aa10.97□□□□□ -0.65
NPHP1-208ENST00000449600 PRR20CP86479 221 aa10.97□□□□□ -0.65
NPHP1-208ENST00000449600 PRR20DP86480 221 aa10.97□□□□□ -0.65
NPHP1-208ENST00000449600 PRR20BP86481 221 aa10.97□□□□□ -0.65
NPHP1-208ENST00000449600 PRR20AP86496 221 aa10.97□□□□□ -0.65
NPHP1-208ENST00000449600 PAXIP1Q6ZW49 1069 aaPredicted RBP10.97□□□□□ -0.65
NPHP1-208ENST00000449600 HDGFL2Q7Z4V5 671 aaPredicted RBP10.97□□□□□ -0.65
NPHP1-208ENST00000449600 ANKLE1Q8NAG6 615 aa10.97□□□□□ -0.65
NPHP1-208ENST00000449600 PRKRIP1Q9H875 184 aaPredicted RBP10.97□□□□□ -0.65
NPHP1-208ENST00000449600 TFCP2L1Q9NZI6 479 aa10.97□□□□□ -0.65
NPHP1-208ENST00000449600 USP6P35125 1406 aa10.97□□□□□ -0.65
NPHP1-208ENST00000449600 DNAJB2P25686 324 aa10.96□□□□□ -0.65
NPHP1-208ENST00000449600 MLLT3P42568 568 aaPredicted RBP10.96□□□□□ -0.65
NPHP1-208ENST00000449600 FAM161AQ3B820 660 aa10.96□□□□□ -0.65
NPHP1-208ENST00000449600 ZNF598Q86UK7 904 aaKnown RBP10.96□□□□□ -0.65
NPHP1-208ENST00000449600 CFAP44Q96MT7 982 aa10.96□□□□□ -0.65
NPHP1-208ENST00000449600 TMEM134Q9H6X4 195 aa10.96□□□□□ -0.65
NPHP1-208ENST00000449600 NMRK2Q9NPI5 230 aa10.96□□□□□ -0.65
NPHP1-208ENST00000449600 C10orf71Q711Q0 1435 aa10.95□□□□□ -0.66
NPHP1-208ENST00000449600 PTGDRQ13258 359 aa10.95□□□□□ -0.66
NPHP1-208ENST00000449600 ABTB2Q8N961 1025 aa10.95□□□□□ -0.66
NPHP1-208ENST00000449600 CARD10Q9BWT7 1032 aa10.95□□□□□ -0.66
NPHP1-208ENST00000449600 ACTN4O43707 911 aaKnown RBP10.94□□□□□ -0.66
NPHP1-208ENST00000449600 LIAT1Q6ZQX7 453 aa10.94□□□□□ -0.66
NPHP1-208ENST00000449600 NLRP13Q86W25 1043 aa10.94□□□□□ -0.66
NPHP1-208ENST00000449600 ADGRG1Q9Y653 693 aa10.94□□□□□ -0.66
NPHP1-208ENST00000449600 ABCC6O95255 1503 aa10.94□□□□□ -0.66
NPHP1-208ENST00000449600 ITSN1Q15811 1721 aa10.93□□□□□ -0.66
NPHP1-208ENST00000449600 PPEF1O14829 653 aaPredicted RBP10.93□□□□□ -0.66
NPHP1-208ENST00000449600 DGAT1O75907 488 aa10.93□□□□□ -0.66
NPHP1-208ENST00000449600 S1PR4O95977 384 aa10.93□□□□□ -0.66
NPHP1-208ENST00000449600 CENPBP07199 599 aaPredicted RBP10.93□□□□□ -0.66
NPHP1-208ENST00000449600 CC2D1BQ5T0F9 858 aaKnown RBP10.93□□□□□ -0.66
NPHP1-208ENST00000449600 NUDT16Q96DE0 195 aaKnown RBP10.93□□□□□ -0.66
NPHP1-208ENST00000449600 SLC12A5Q9H2X9 1139 aa10.93□□□□□ -0.66
NPHP1-208ENST00000449600 MRS2Q9HD23 443 aa10.93□□□□□ -0.66
NPHP1-208ENST00000449600 BTAF1O14981 1849 aa10.93□□□□□ -0.66
NPHP1-208ENST00000449600 ANKRD36BQ8N2N9 1353 aa10.92□□□□□ -0.66
NPHP1-208ENST00000449600 ACEP12821 1306 aa10.92□□□□□ -0.66
NPHP1-208ENST00000449600 CGNL1Q0VF96 1302 aa10.92□□□□□ -0.66
NPHP1-208ENST00000449600 IGSF1Q8N6C5 1336 aa10.92□□□□□ -0.66
NPHP1-208ENST00000449600 MYBBP1AQ9BQG0 1328 aaKnown RBP10.92□□□□□ -0.66
NPHP1-208ENST00000449600 PLEKHG3A1L390 1219 aa10.92□□□□□ -0.66
NPHP1-208ENST00000449600 PER1O15534 1290 aaPredicted RBP10.92□□□□□ -0.66
NPHP1-208ENST00000449600 ACSBG1Q96GR2 724 aa10.92□□□□□ -0.66
NPHP1-208ENST00000449600 PRDM10Q9NQV6 1147 aa10.92□□□□□ -0.66
NPHP1-208ENST00000449600 TUBGCP6Q96RT7 1819 aa10.92□□□□□ -0.66
NPHP1-208ENST00000449600 COL18A1P39060 1754 aa10.92□□□□□ -0.66
NPHP1-208ENST00000449600 POTECB2RU33 542 aa10.91□□□□□ -0.66
NPHP1-208ENST00000449600 GDF9O60383 454 aa10.91□□□□□ -0.66
NPHP1-208ENST00000449600 RGS19P49795 217 aa10.91□□□□□ -0.66
NPHP1-208ENST00000449600 PKDCCQ504Y2 493 aa10.91□□□□□ -0.66
NPHP1-208ENST00000449600 COL23A1Q86Y22 540 aaPredicted RBP10.91□□□□□ -0.66
NPHP1-208ENST00000449600 C16orf71Q8IYS4 520 aaPredicted RBP10.91□□□□□ -0.66
NPHP1-208ENST00000449600 YTHDC1Q96MU7 727 aaKnown RBP10.91□□□□□ -0.66
NPHP1-208ENST00000449600 NPC1L1Q9UHC9 1359 aa10.9□□□□□ -0.66
NPHP1-208ENST00000449600 SLIT3O75094 1523 aa10.9□□□□□ -0.66
NPHP1-208ENST00000449600 CABP1Q9NZU7 370 aa10.9□□□□□ -0.66
NPHP1-208ENST00000449600 PXDNLA1KZ92 1463 aa10.89□□□□□ -0.67
NPHP1-208ENST00000449600 RCCD1A6NED2 376 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms