RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 ATF5Q9Y2D1 282 aaPredicted RBP12.63□□□□□ -0.39
CCDC171-203ENST00000449575 USP42Q9H9J4 1324 aaKnown RBP12.63□□□□□ -0.39
CCDC171-203ENST00000449575 CCDC30Q5VVM6 783 aa12.63□□□□□ -0.39
CCDC171-203ENST00000449575 COPS6Q7L5N1 327 aa12.63□□□□□ -0.39
CCDC171-203ENST00000449575 DZIP3Q86Y13 1208 aaKnown RBP12.63□□□□□ -0.39
CCDC171-203ENST00000449575 XAGE3Q8WTP9 111 aa12.63□□□□□ -0.39
CCDC171-203ENST00000449575 DBF4Q9UBU7 674 aaPredicted RBP12.63□□□□□ -0.39
CCDC171-203ENST00000449575 ARFGEF2Q9Y6D5 1785 aa12.63□□□□□ -0.39
CCDC171-203ENST00000449575 GYS1P13807 737 aa12.62□□□□□ -0.39
CCDC171-203ENST00000449575 COL24A1Q17RW2 1714 aa12.62□□□□□ -0.39
CCDC171-203ENST00000449575 ERBB4Q15303 1308 aa12.62□□□□□ -0.39
CCDC171-203ENST00000449575 SLC4A2P04920 1241 aa12.62□□□□□ -0.39
CCDC171-203ENST00000449575 HLFQ16534 295 aa12.62□□□□□ -0.39
CCDC171-203ENST00000449575 ZNF428Q96B54 188 aa12.62□□□□□ -0.39
CCDC171-203ENST00000449575 CAMTA2O94983 1202 aa12.61□□□□□ -0.39
CCDC171-203ENST00000449575 ADRA2BP18089 450 aa12.61□□□□□ -0.39
CCDC171-203ENST00000449575 KCNA4P22459 653 aa12.61□□□□□ -0.39
CCDC171-203ENST00000449575 SSH1Q8WYL5 1049 aa12.61□□□□□ -0.39
CCDC171-203ENST00000449575 ZBTB3Q9H5J0 574 aa12.61□□□□□ -0.39
CCDC171-203ENST00000449575 NARFQ9UHQ1 456 aa12.61□□□□□ -0.39
CCDC171-203ENST00000449575 AFDNP55196 1824 aaKnown RBP12.61□□□□□ -0.39
CCDC171-203ENST00000449575 UTRNP46939 3433 aa12.61□□□□□ -0.39
CCDC171-203ENST00000449575 FLAD1Q8NFF5 587 aa12.6□□□□□ -0.39
CCDC171-203ENST00000449575 ANKRD36CQ5JPF3 1778 aa12.6□□□□□ -0.39
CCDC171-203ENST00000449575 ZPR1O75312 459 aa12.59□□□□□ -0.39
CCDC171-203ENST00000449575 HMGB2P26583 209 aaKnown RBP12.59□□□□□ -0.39
CCDC171-203ENST00000449575 STK31Q9BXU1 1019 aa12.59□□□□□ -0.39
CCDC171-203ENST00000449575 BICDL1Q6ZP65 573 aa12.59□□□□□ -0.39
CCDC171-203ENST00000449575 HYPKQ9NX55 129 aa12.59□□□□□ -0.39
CCDC171-203ENST00000449575 MAP3K15Q6ZN16 1313 aa12.59□□□□□ -0.39
CCDC171-203ENST00000449575 BCAR3O75815 825 aa12.58□□□□□ -0.39
CCDC171-203ENST00000449575 RARSP54136 660 aaKnown RBP12.58□□□□□ -0.39
CCDC171-203ENST00000449575 TBC1D9BQ66K14 1250 aa12.58□□□□□ -0.39
CCDC171-203ENST00000449575 NPM2Q86SE8 214 aaKnown RBP12.58□□□□□ -0.39
CCDC171-203ENST00000449575 MRPL50Q8N5N7 158 aaKnown RBP12.58□□□□□ -0.39
CCDC171-203ENST00000449575 MTFR1LQ9H019 292 aa12.58□□□□□ -0.4
CCDC171-203ENST00000449575 A0A087WZG4 1122 aa12.58□□□□□ -0.4
CCDC171-203ENST00000449575 PTGER2P43116 358 aa12.58□□□□□ -0.4
CCDC171-203ENST00000449575 FLIIQ13045 1269 aa12.58□□□□□ -0.4
CCDC171-203ENST00000449575 SGIP1Q9BQI5 828 aa12.58□□□□□ -0.4
CCDC171-203ENST00000449575 ADCY9O60503 1353 aa12.57□□□□□ -0.4
CCDC171-203ENST00000449575 NFIXQ14938 502 aa12.57□□□□□ -0.4
CCDC171-203ENST00000449575 DDR1Q08345 913 aa12.57□□□□□ -0.4
CCDC171-203ENST00000449575 KIF6Q6ZMV9 814 aa12.57□□□□□ -0.4
CCDC171-203ENST00000449575 ANKRD13DQ6ZTN6 518 aa12.57□□□□□ -0.4
CCDC171-203ENST00000449575 SLC16A10Q8TF71 515 aa12.57□□□□□ -0.4
CCDC171-203ENST00000449575 SMC4Q9NTJ3 1288 aa12.57□□□□□ -0.4
CCDC171-203ENST00000449575 PI4KAP2A4QPH2 592 aa12.56□□□□□ -0.4
CCDC171-203ENST00000449575 F6X3S4 739 aa12.56□□□□□ -0.4
CCDC171-203ENST00000449575 MMP10P09238 476 aa12.56□□□□□ -0.4
CCDC171-203ENST00000449575 GPTP24298 496 aa12.56□□□□□ -0.4
CCDC171-203ENST00000449575 PI4KAP1Q8N8J0 262 aa12.56□□□□□ -0.4
CCDC171-203ENST00000449575 PPP4R2Q9NY27 417 aa12.56□□□□□ -0.4
CCDC171-203ENST00000449575 NOP58Q9Y2X3 529 aaKnown RBP12.56□□□□□ -0.4
CCDC171-203ENST00000449575 TM4SF1P30408 202 aa12.56□□□□□ -0.4
CCDC171-203ENST00000449575 TNNQ9UQP3 1299 aa12.56□□□□□ -0.4
CCDC171-203ENST00000449575 FKBP5Q13451 457 aaPredicted RBP12.55□□□□□ -0.4
CCDC171-203ENST00000449575 GIGYF2Q6Y7W6 1299 aaKnown RBP12.55□□□□□ -0.4
CCDC171-203ENST00000449575 CCDC24Q8N4L8 307 aa12.55□□□□□ -0.4
CCDC171-203ENST00000449575 PLBD2Q8NHP8 589 aa12.55□□□□□ -0.4
CCDC171-203ENST00000449575 UBN2Q6ZU65 1347 aa12.55□□□□□ -0.4
CCDC171-203ENST00000449575 FAM177BA6PVY3 158 aa12.55□□□□□ -0.4
CCDC171-203ENST00000449575 ERVV-1B6SEH8 477 aa12.55□□□□□ -0.4
CCDC171-203ENST00000449575 ATP5J2-PTCD1G3V325 749 aa12.55□□□□□ -0.4
CCDC171-203ENST00000449575 CT47B1P0C2W7 299 aaPredicted RBP12.55□□□□□ -0.4
CCDC171-203ENST00000449575 ALDH1L2Q3SY69 923 aa12.55□□□□□ -0.4
CCDC171-203ENST00000449575 NLGN1Q8N2Q7 840 aa12.55□□□□□ -0.4
CCDC171-203ENST00000449575 MAP3K2Q9Y2U5 619 aa12.55□□□□□ -0.4
CCDC171-203ENST00000449575 RIC3Q7Z5B4 369 aa12.54□□□□□ -0.4
CCDC171-203ENST00000449575 SPON1Q9HCB6 807 aa12.54□□□□□ -0.4
CCDC171-203ENST00000449575 NRXN2Q9P2S2 1712 aa12.54□□□□□ -0.4
CCDC171-203ENST00000449575 ANKRD31Q8N7Z5 1873 aa12.54□□□□□ -0.4
CCDC171-203ENST00000449575 POLRMTO00411 1230 aaKnown RBP12.54□□□□□ -0.4
CCDC171-203ENST00000449575 NOB1Q9ULX3 412 aaKnown RBP12.54□□□□□ -0.4
CCDC171-203ENST00000449575 NIP7Q9Y221 180 aaKnown RBP eCLIP12.54□□□□□ -0.4
CCDC171-203ENST00000449575 CLEC4GQ6UXB4 293 aa12.53□□□□□ -0.4
CCDC171-203ENST00000449575 KSR2Q6VAB6 950 aa12.53□□□□□ -0.4
CCDC171-203ENST00000449575 ZNF34Q8IZ26 560 aa12.53□□□□□ -0.4
CCDC171-203ENST00000449575 MYD88Q99836 296 aa12.53□□□□□ -0.4
CCDC171-203ENST00000449575 CHMP4AQ9BY43 222 aa12.53□□□□□ -0.4
CCDC171-203ENST00000449575 TCIRG1Q13488 830 aa12.52□□□□□ -0.4
CCDC171-203ENST00000449575 SYNE4Q8N205 404 aa12.52□□□□□ -0.4
CCDC171-203ENST00000449575 CARMIL3Q8ND23 1372 aa12.52□□□□□ -0.41
CCDC171-203ENST00000449575 ATP10DQ9P241 1426 aa12.52□□□□□ -0.41
CCDC171-203ENST00000449575 IGKV5-2P06315 115 aa12.52□□□□□ -0.41
CCDC171-203ENST00000449575 CWF19L2Q2TBE0 894 aaKnown RBP12.52□□□□□ -0.41
CCDC171-203ENST00000449575 FRAT1Q92837 279 aaPredicted RBP12.52□□□□□ -0.41
CCDC171-203ENST00000449575 LRP5O75197 1615 aa12.52□□□□□ -0.41
CCDC171-203ENST00000449575 N4BP2Q86UW6 1770 aaPredicted RBP12.51□□□□□ -0.41
CCDC171-203ENST00000449575 RTL5Q5HYW3 569 aaPredicted RBP12.51□□□□□ -0.41
CCDC171-203ENST00000449575 SUSD4Q5VX71 490 aa12.51□□□□□ -0.41
CCDC171-203ENST00000449575 JARID2Q92833 1246 aaPredicted RBP12.51□□□□□ -0.41
CCDC171-203ENST00000449575 SETDB2Q96T68 719 aa12.51□□□□□ -0.41
CCDC171-203ENST00000449575 METTL22Q9BUU2 404 aaPredicted RBP12.51□□□□□ -0.41
CCDC171-203ENST00000449575 RCAN3Q9UKA8 241 aa12.51□□□□□ -0.41
CCDC171-203ENST00000449575 ZNF652Q9Y2D9 606 aa12.51□□□□□ -0.41
CCDC171-203ENST00000449575 KIF13BQ9NQT8 1826 aa12.51□□□□□ -0.41
CCDC171-203ENST00000449575 SERPINB2P05120 415 aa12.51□□□□□ -0.41
CCDC171-203ENST00000449575 NUTM1Q86Y26 1132 aa12.51□□□□□ -0.41
CCDC171-203ENST00000449575 DNAAF4Q8WXU2 420 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms