RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 PPP1R1BQ9UD71 204 aaPredicted RBP7.34□□□□□ -1.24
PROM1-201ENST00000447510 ZBTB1Q9Y2K1 713 aa7.34□□□□□ -1.24
PROM1-201ENST00000447510 COG6Q9Y2V7 657 aa7.34□□□□□ -1.24
PROM1-201ENST00000447510 FAM208AQ9UK61 1670 aaKnown RBP7.33□□□□□ -1.24
PROM1-201ENST00000447510 SOS1Q07889 1333 aaPredicted RBP7.33□□□□□ -1.24
PROM1-201ENST00000447510 PI4KAP2A4QPH2 592 aa7.33□□□□□ -1.24
PROM1-201ENST00000447510 F6X3S4 739 aa7.33□□□□□ -1.24
PROM1-201ENST00000447510 GPTP24298 496 aa7.33□□□□□ -1.24
PROM1-201ENST00000447510 EZH2Q15910 746 aaKnown RBP7.33□□□□□ -1.24
PROM1-201ENST00000447510 PI4KAP1Q8N8J0 262 aa7.33□□□□□ -1.24
PROM1-201ENST00000447510 PHAXQ9H814 394 aaKnown RBP7.33□□□□□ -1.24
PROM1-201ENST00000447510 RGS12O14924 1447 aa7.33□□□□□ -1.24
PROM1-201ENST00000447510 SLC27A3Q5K4L6 730 aa7.33□□□□□ -1.24
PROM1-201ENST00000447510 C20orf194Q5TEA3 1177 aa7.33□□□□□ -1.24
PROM1-201ENST00000447510 MYD88Q99836 296 aa7.33□□□□□ -1.24
PROM1-201ENST00000447510 ATF7IPQ6VMQ6 1270 aa7.33□□□□□ -1.24
PROM1-201ENST00000447510 ANP32BQ92688 251 aaKnown RBP7.33□□□□□ -1.24
PROM1-201ENST00000447510 HDAC5Q9UQL6 1122 aa7.33□□□□□ -1.24
PROM1-201ENST00000447510 MAP3K2Q9Y2U5 619 aa7.33□□□□□ -1.24
PROM1-201ENST00000447510 BCL9O00512 1426 aa7.32□□□□□ -1.24
PROM1-201ENST00000447510 G2E3Q7L622 706 aa7.32□□□□□ -1.24
PROM1-201ENST00000447510 CCDC125Q86Z20 511 aa7.32□□□□□ -1.24
PROM1-201ENST00000447510 SRCIN1Q9C0H9 1055 aa7.32□□□□□ -1.24
PROM1-201ENST00000447510 ATP5J2-PTCD1G3V325 749 aa7.32□□□□□ -1.24
PROM1-201ENST00000447510 FGD1P98174 961 aa7.32□□□□□ -1.24
PROM1-201ENST00000447510 MRPL50Q8N5N7 158 aaKnown RBP7.32□□□□□ -1.24
PROM1-201ENST00000447510 DNAAF4Q8WXU2 420 aa7.32□□□□□ -1.24
PROM1-201ENST00000447510 PDCL3Q9H2J4 239 aa7.32□□□□□ -1.24
PROM1-201ENST00000447510 HSP90AB3PQ58FF7 597 aa7.32□□□□□ -1.24
PROM1-201ENST00000447510 PARP4Q9UKK3 1724 aaKnown RBP7.32□□□□□ -1.24
PROM1-201ENST00000447510 CRYBG1Q9Y4K1 1723 aa7.31□□□□□ -1.24
PROM1-201ENST00000447510 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.31□□□□□ -1.24
PROM1-201ENST00000447510 ITPK1Q13572 414 aa7.31□□□□□ -1.24
PROM1-201ENST00000447510 PROSER3Q2NL68 480 aa7.31□□□□□ -1.24
PROM1-201ENST00000447510 TAF7LQ5H9L4 462 aa7.31□□□□□ -1.24
PROM1-201ENST00000447510 GLI3P10071 1580 aa7.31□□□□□ -1.24
PROM1-201ENST00000447510 CYP19A1P11511 503 aaPredicted RBP7.31□□□□□ -1.24
PROM1-201ENST00000447510 OS9Q13438 667 aaPredicted RBP7.31□□□□□ -1.24
PROM1-201ENST00000447510 TRMT2AQ8IZ69 625 aaKnown RBP7.31□□□□□ -1.24
PROM1-201ENST00000447510 RNF123Q5XPI4 1314 aa7.31□□□□□ -1.24
PROM1-201ENST00000447510 MSNP26038 577 aaKnown RBP7.31□□□□□ -1.24
PROM1-201ENST00000447510 IL6STP40189 918 aaPredicted RBP7.31□□□□□ -1.24
PROM1-201ENST00000447510 CCT4P50991 539 aaKnown RBP7.31□□□□□ -1.24
PROM1-201ENST00000447510 KSR2Q6VAB6 950 aa7.31□□□□□ -1.24
PROM1-201ENST00000447510 FLAD1Q8NFF5 587 aa7.31□□□□□ -1.24
PROM1-201ENST00000447510 PTPRCP08575 1304 aa7.31□□□□□ -1.24
PROM1-201ENST00000447510 TTLL7Q6ZT98 887 aa7.3□□□□□ -1.24
PROM1-201ENST00000447510 LINC00116Q8NCU8 138 aa7.3□□□□□ -1.24
PROM1-201ENST00000447510 SETDB2Q96T68 719 aa7.3□□□□□ -1.24
PROM1-201ENST00000447510 TRMT112Q9UI30 125 aaKnown RBP7.3□□□□□ -1.24
PROM1-201ENST00000447510 NIP7Q9Y221 180 aaKnown RBP eCLIP7.3□□□□□ -1.24
PROM1-201ENST00000447510 R3HCC1Q9Y3T6 440 aaKnown RBP7.3□□□□□ -1.24
PROM1-201ENST00000447510 ERBB4Q15303 1308 aa7.3□□□□□ -1.24
PROM1-201ENST00000447510 RPS6KA4O75676 772 aa7.3□□□□□ -1.24
PROM1-201ENST00000447510 UBTFL1P0CB47 393 aaPredicted RBP7.3□□□□□ -1.24
PROM1-201ENST00000447510 BBXQ8WY36 941 aaPredicted RBP7.3□□□□□ -1.24
PROM1-201ENST00000447510 DDX19BQ9UMR2 479 aa7.3□□□□□ -1.24
PROM1-201ENST00000447510 PLSCR1O15162 318 aa7.3□□□□□ -1.24
PROM1-201ENST00000447510 SMIM5Q71RC9 77 aa7.3□□□□□ -1.24
PROM1-201ENST00000447510 TPM2P07951 284 aa7.29□□□□□ -1.24
PROM1-201ENST00000447510 TRIM27P14373 513 aa7.29□□□□□ -1.24
PROM1-201ENST00000447510 MSL1Q68DK7 614 aa7.29□□□□□ -1.24
PROM1-201ENST00000447510 TRAK2O60296 914 aa7.29□□□□□ -1.24
PROM1-201ENST00000447510 MAPK8IP2Q13387 824 aaPredicted RBP7.29□□□□□ -1.24
PROM1-201ENST00000447510 C8orf34Q49A92 452 aa7.29□□□□□ -1.24
PROM1-201ENST00000447510 USPL1Q5W0Q7 1092 aa7.29□□□□□ -1.24
PROM1-201ENST00000447510 CENPQQ7L2Z9 268 aaPredicted RBP7.29□□□□□ -1.24
PROM1-201ENST00000447510 NBPF5PQ86XG9 351 aaPredicted RBP7.29□□□□□ -1.24
PROM1-201ENST00000447510 TMEM57Q8N5G2 664 aa7.29□□□□□ -1.24
PROM1-201ENST00000447510 PLBD2Q8NHP8 589 aa7.29□□□□□ -1.24
PROM1-201ENST00000447510 TMX4Q9H1E5 349 aaPredicted RBP7.29□□□□□ -1.24
PROM1-201ENST00000447510 RGPD1P0DJD0 1748 aa7.29□□□□□ -1.24
PROM1-201ENST00000447510 GNAI3P08754 354 aa7.29□□□□□ -1.24
PROM1-201ENST00000447510 HSP90B1P14625 803 aaKnown RBP7.29□□□□□ -1.24
PROM1-201ENST00000447510 PDE3AQ14432 1141 aa7.29□□□□□ -1.24
PROM1-201ENST00000447510 JARID2Q92833 1246 aaPredicted RBP7.29□□□□□ -1.24
PROM1-201ENST00000447510 APBB1O00213 710 aa7.28□□□□□ -1.24
PROM1-201ENST00000447510 CWC25Q9NXE8 425 aaPredicted RBP7.28□□□□□ -1.24
PROM1-201ENST00000447510 SRP68Q9UHB9 627 aaKnown RBP7.28□□□□□ -1.24
PROM1-201ENST00000447510 NRAPQ86VF7 1730 aa7.28□□□□□ -1.24
PROM1-201ENST00000447510 NBPF26B4DH59 902 aa7.28□□□□□ -1.24
PROM1-201ENST00000447510 POLD1P28340 1107 aa7.28□□□□□ -1.24
PROM1-201ENST00000447510 MRE11P49959 708 aa7.28□□□□□ -1.24
PROM1-201ENST00000447510 NBPF10Q6P3W6 841 aaKnown RBP7.28□□□□□ -1.24
PROM1-201ENST00000447510 PPP1R42Q7Z4L9 355 aa7.28□□□□□ -1.24
PROM1-201ENST00000447510 NBPF15Q8N660 670 aa7.28□□□□□ -1.24
PROM1-201ENST00000447510 SLC4A9Q96Q91 983 aa7.28□□□□□ -1.24
PROM1-201ENST00000447510 GRPEL1Q9HAV7 217 aa7.28□□□□□ -1.24
PROM1-201ENST00000447510 PSDA5PKW4 1024 aaPredicted RBP7.28□□□□□ -1.24
PROM1-201ENST00000447510 NCLP19338 710 aaKnown RBP7.28□□□□□ -1.24
PROM1-201ENST00000447510 R3HDM1Q15032 1099 aaKnown RBP7.28□□□□□ -1.24
PROM1-201ENST00000447510 CWF19L2Q2TBE0 894 aaKnown RBP7.28□□□□□ -1.24
PROM1-201ENST00000447510 RC3H1Q5TC82 1133 aaKnown RBP7.28□□□□□ -1.24
PROM1-201ENST00000447510 CCDC85AQ96PX6 553 aaPredicted RBP7.28□□□□□ -1.24
PROM1-201ENST00000447510 PARP3Q9Y6F1 533 aa7.28□□□□□ -1.24
PROM1-201ENST00000447510 ARHGAP45Q92619 1136 aa7.27□□□□□ -1.24
PROM1-201ENST00000447510 ARHGEF1Q92888 912 aaKnown RBP7.27□□□□□ -1.24
PROM1-201ENST00000447510 LRRC4BQ9NT99 713 aa7.27□□□□□ -1.24
PROM1-201ENST00000447510 TNNQ9UQP3 1299 aa7.27□□□□□ -1.24
PROM1-201ENST00000447510 MAP3K15Q6ZN16 1313 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms